Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0006002

Physical Location & Seq

Genomic Coordinates Reverse (-)

733099 .. 735238

Gene Structure 2140 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1248 bp

ATGTTCGACAACACCACCACCACCAACAACAACACCGCCGCCTCTTGTTCCGCTCCTCCGTCTTCTTCCTCTCATGAAAATGGCGGAGCCACCCACAAACGAAAAAGAAGACCTGCAGGCACACCAGATCCGGATCCAGAAGTGGTGTCTCTGTCCCCCAAGACCCTACTCGAATCGGACCGGTACGTGTGCGAGATCTGCAACCAGGGATTTCAGAGAGACCAGAATCTGCAGATGCACAGGCGTCGTCATAAGGTGCCGTGGAAACTACTGAAGCGAGAGATAGCGGAAGATCAGGTGATCAAGAAGAAGGTGTTTGTGTGCCCGGAGCCCAGCTGCCTCCACCACGACCCCCGCCACGCCCTAGGCGATCTCGTCGGGATCAAAAAACACTTCAGAAGAAAACACAGCAACCACAAGCAGTGGGTCTGCGACAAGTGCTCCAAAGGCTACGCCGTGCAGTCCGATTACAAAGCACACCTCAAAACCTGCGGCACCAGAGGACATTCCTGTGACTGCGGCCGTGTCTTTTCCAGAGTGGAAAGTTTCATAGAGCACCAAGACACTTGCACAGTCCGACACGTCGTTCGGCCGGAATTACAGGCAGCGCTGCAGCCGACGGCCTGCTCGTCGCGAACTGCATCGAGTACCAGCCCCTCTAGCGACGCCAATTTCAGCATTAGTAACAATGTGGCAGCTCCAGTAGTATTGGCTGGACTCCCGGTGCGACCAAACCCAACTCACCATCACGATAAGCGCGCCGGTATGAATCCTTATATTTCTTGCAACCGTCAGCAACAGCAACAGCAGCACCAACAACAAGTGCATAATAATATATTGGAACTTCAGCTCCTTCCGTCCTCAAACGCCCATACTTCTTCCCCGCCAAATTTAGACGAAAGTCACGCAACTAATCTGAAGCTCTCGATTGGATCGCCGTCAAGTGATCAGCTTGCCAACGAAAAGAATGAATCGAGCAAGTATAATTCATCGTCCGATATAAAAAGAAGAAGAAGCTCTCCAGGTAATGAGAAGAACATTAACAAAGCATCTGCTGTTGGAAGAGTTGGGTCGACGTCGGAACTGGTCAGGTTGAAAGAGTTTGCGAGTGAGGAGTTGAAATTGGCCGTGGCTGAAAAGTCGTATGCCGAAGACGCCCGGCGAGAAGCCAAACGGCAAATAGAGATGGCGGAGATCATCGATGGAGTTCGCGAACGCCAAGAGGATCAGGCAGCAAGCGCAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006109 GO:0006355 GO:0007275 GO:0008150 GO:0009581 GO:0009582 GO:0009590 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009653 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009959 GO:0009965 GO:0010016 GO:0010031 GO:0010468 GO:0010556 GO:0010600 GO:0010601 GO:0010675 GO:0010817 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032879 GO:0032881 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043621 GO:0044212 GO:0044424 GO:0044464 GO:0046885 GO:0046886 GO:0046982 GO:0046983 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050879 GO:0050896 GO:0051049 GO:0051171 GO:0051252 GO:0051606 GO:0060255 GO:0061458 GO:0065007 GO:0065008 GO:0080090 GO:0090354 GO:0090355 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000012 GO:2000112 GO:2000904 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2H2 zf-met

Protein Analysis

416

Amino Acids

46.12

Weight (kDa)

9.16

Isoelectric Point (pI)

73.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2H2-2nd_BIRD-IDD	PF22996	102 - 136	7.8e-19	BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD	PF22995	141 - 165	3.5e-14	BIRD-IDD transcription factor, third C2HC zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25250 AT1G25250 AT1G25250 AT1G68130 AT1G68130
fragaria_vesca	FvH4_5g17840
malus_domestica	MD06G1234600.v1.1 MD13G1015000.v1.1 MD14G1241600.v1.1 MD16G1012300.v1.1
prunus_persica	Prupe.1G338700_v2.0.a1 Prupe.5G239100_v2.0.a1
pyrus_communis	pycom06g20930 pycom13g01270 pycom14g20290 pycom16g01170
rosa_chinensis	RchiOBHm_Chr7g0177741
rosa_laevigata	RLG00000005509
rosa_multiflora	Rmu_sc0004786.1_g000006
rosa_roxburghii	Rroxscaffold_3G00275600
rosa_rugosa	Rorug06G0409000 Rorug06G0409100
rosa_samantha	Rh7AG008500 Rh7BG008500 Rh7CG008900 Rh7DG008600
rosa_wichuraiana	Rw7G000710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1079
Acc36I	ACCTGC	2 cut(s)	121, 497
AccB1I	GGYRCC	2 cut(s)	256, 494
AccBSI	CCGCTC	1 cut(s)	53
AccI	GTMKAC	1 cut(s)	1073
AccII	CGCG	3 cut(s)	634, 759, 1212
AccIII	TCCGGA	1 cut(s)	130
AclWI	GGATC	6 cut(s)	122, 128, 141, 389, 940, 1233
AcoI	YGGCCR	3 cut(s)	520, 590, 1125
AcsI	RAATTY	1 cut(s)	889
AcuI	CTGAAG	4 cut(s)	293, 379, 830, 938
AcyI	GRCGYC	4 cut(s)	244, 666, 1076, 1155
AfaI	GTAC	2 cut(s)	185, 649
AfeI	AGCGCT	1 cut(s)	609
AflIII	ACRYGT	2 cut(s)	186, 580
AgeI	ACCGGT	1 cut(s)	180
AgsI	TTSAA	2 cut(s)	1096, 1120
AjiI	CACGTC	1 cut(s)	583
AjnI	CCWGG	2 cut(s)	204, 1021
AloI	GAACNNNNNNTCC	2 cut(s)	834, 866
AluBI	AGCT	6 cut(s)	336, 698, 850, 922, 952, 1017
AluI	AGCT	6 cut(s)	336, 698, 850, 922, 952, 1017
Alw21I	GWGCWC	2 cut(s)	443, 558
Alw26I	GTCTC	2 cut(s)	153, 213
AlwI	GGATC	6 cut(s)	122, 128, 141, 389, 940, 1233
AlwNI	CAGNNNCTG	1 cut(s)	229
Aor13HI	TCCGGA	1 cut(s)	130
Aor51HI	AGCGCT	1 cut(s)	609
AoxI	GGCC	4 cut(s)	520, 590, 621, 1125
ApeKI	GCWGC	7 cut(s)	336, 605, 610, 613, 695, 808, 1232
ApoI	RAATTY	1 cut(s)	889
ArsI	GACNNNNNNTTYG	2 cut(s)	570, 602
AsiGI	ACCGGT	1 cut(s)	180
AspA2I	CCTAGG	1 cut(s)	364
AspLEI	GCGC	4 cut(s)	610, 759, 761, 1241
AspS9I	GGNCC	1 cut(s)	178
AsuC2I	CCSGG	3 cut(s)	326, 722, 1159
AsuHPI	GGTGA	2 cut(s)	310, 734
AvaII	GGWCC	1 cut(s)	178
AvrII	CCTAGG	1 cut(s)	364
BaeGI	GKGCMC	1 cut(s)	326
BamHI	GGATCC	1 cut(s)	133
BanI	GGYRCC	2 cut(s)	256, 494
BanII	GRGCYC	1 cut(s)	333
BbsI	GAAGAC	3 cut(s)	54, 115, 1158
Bbv12I	GWGCWC	2 cut(s)	443, 558
BbvI	GCAGC	7 cut(s)	323, 597, 617, 625, 707, 820, 1244
BccI	CCATC	3 cut(s)	753, 1180, 1196
BceAI	ACGGC	7 cut(s)	244, 440, 507, 636, 922, 1112, 1190
BcgI	CGANNNNNNTGC	2 cut(s)	227, 261
BciT130I	CCWGG	2 cut(s)	206, 1023
BclI	TGATCA	2 cut(s)	300, 946
BcnI	CCSGG	3 cut(s)	326, 722, 1159
BcoDI	GTCTC	2 cut(s)	153, 213
BfaI	CTAG	2 cut(s)	365, 660
BfmI	CTRYAG	3 cut(s)	114, 230, 611
BfoI	RGCGCY	1 cut(s)	611
BfuAI	ACCTGC	2 cut(s)	121, 497
BglII	AGATCT	1 cut(s)	195
BlnI	CCTAGG	1 cut(s)	364
Bme1390I	CCNGG	5 cut(s)	206, 326, 722, 1023, 1159
Bme18I	GGWCC	1 cut(s)	178
BmgBI	CACGTC	1 cut(s)	583
BmgT120I	GGNCC	1 cut(s)	178
BmiI	GGNNCC	5 cut(s)	88, 135, 258, 330, 496
BmrFI	CCNGG	5 cut(s)	206, 326, 722, 1023, 1159
BmsI	GCATC	3 cut(s)	225, 650, 1058
BoxI	GACNNNNGTC	1 cut(s)	900
BpiI	GAAGAC	3 cut(s)	54, 115, 1158
BpmI	CTGGAG	2 cut(s)	684, 1005
BpuMI	CCSGG	3 cut(s)	326, 722, 1159
Bsa29I	ATCGAT	1 cut(s)	1200
BsaAI	YACGTR	1 cut(s)	187
BsaBI	GATNNNNATC	1 cut(s)	132
BsaHI	GRCGYC	4 cut(s)	244, 666, 1076, 1155
BsaI	GGTCTC	1 cut(s)	213
BsaJI	CCNNGG	4 cut(s)	205, 260, 364, 1128
BsaWI	WCCGGW	2 cut(s)	130, 180
BsaXI	ACNNNNNCTCC	4 cut(s)	425, 455, 834, 864
Bse118I	RCCGGY	2 cut(s)	180, 761
Bse1I	ACTGG	2 cut(s)	701, 1089
Bse8I	GATNNNNATC	1 cut(s)	132
BseAI	TCCGGA	1 cut(s)	130
BseBI	CCWGG	2 cut(s)	206, 1023
BseCI	ATCGAT	1 cut(s)	1200
BseDI	CCNNGG	4 cut(s)	205, 260, 364, 1128
BseJI	GATNNNNATC	1 cut(s)	132
BseNI	ACTGG	2 cut(s)	701, 1089
BsePI	GCGCGC	1 cut(s)	757
BseRI	GAGGAG	2 cut(s)	45, 1127
BseSI	GKGCMC	1 cut(s)	326
BseX3I	CGGCCG	2 cut(s)	520, 590
BseXI	GCAGC	7 cut(s)	323, 597, 617, 625, 707, 820, 1244
BseYI	CCCAGC	1 cut(s)	332
BsgI	GTGCAG	1 cut(s)	479
Bsh1236I	CGCG	3 cut(s)	634, 759, 1212
Bsh1285I	CGRYCG	2 cut(s)	523, 593
BshFI	GGCC	4 cut(s)	522, 592, 623, 1127
BshNI	GGYRCC	2 cut(s)	256, 494
BshTI	ACCGGT	1 cut(s)	180
BshVI	ATCGAT	1 cut(s)	1200
BsiEI	CGRYCG	2 cut(s)	523, 593
BsiHKAI	GWGCWC	2 cut(s)	443, 558
BsiSI	CCGG	7 cut(s)	131, 181, 326, 593, 722, 762, 1159
BslFI	GGGAC	1 cut(s)	139
BsmAI	GTCTC	2 cut(s)	153, 213
BsmFI	GGGAC	1 cut(s)	139
BsnI	GGCC	4 cut(s)	522, 592, 623, 1127
Bso31I	GGTCTC	1 cut(s)	213
Bsp1286I	GDGCHC	4 cut(s)	326, 333, 443, 558
Bsp13I	TCCGGA	1 cut(s)	130
Bsp68I	TCGCGA	2 cut(s)	634, 1212
BspANI	GGCC	4 cut(s)	522, 592, 623, 1127
BspDI	ATCGAT	1 cut(s)	1200
BspEI	TCCGGA	1 cut(s)	130
BspFNI	CGCG	3 cut(s)	634, 759, 1212
BspHI	TCATGA	1 cut(s)	73
BspLI	GGNNCC	5 cut(s)	88, 135, 258, 330, 496
BspMAI	CTGCAG	3 cut(s)	118, 234, 615
BspMI	ACCTGC	2 cut(s)	121, 497
BspPI	GGATC	6 cut(s)	122, 128, 141, 389, 940, 1233
BspT107I	GGYRCC	2 cut(s)	256, 494
BspTNI	GGTCTC	1 cut(s)	213
BsrBI	CCGCTC	1 cut(s)	53
BsrFI	RCCGGY	2 cut(s)	180, 761
BsrI	ACTGG	2 cut(s)	701, 1089
BssAI	RCCGGY	2 cut(s)	180, 761
BssECI	CCNNGG	4 cut(s)	205, 260, 364, 1128
BssHII	GCGCGC	1 cut(s)	757
BssNI	GRCGYC	4 cut(s)	244, 666, 1076, 1155
BssT1I	CCWWGG	1 cut(s)	364
Bst2UI	CCWGG	2 cut(s)	206, 1023
Bst4CI	ACNGT	2 cut(s)	574, 791
Bst6I	CTCTTC	1 cut(s)	1057
BstACI	GRCGYC	4 cut(s)	244, 666, 1076, 1155
BstBAI	YACGTR	1 cut(s)	187
BstC8I	GCNNGC	6 cut(s)	118, 625, 759, 954, 1237, 1243
BstDSI	CCRYGG	2 cut(s)	260, 1128
BstFNI	CGCG	3 cut(s)	634, 759, 1212
BstH2I	RGCGCY	1 cut(s)	611
BstHHI	GCGC	4 cut(s)	610, 759, 761, 1241
BstMAI	GTCTC	2 cut(s)	153, 213
BstMCI	CGRYCG	2 cut(s)	523, 593
BstMWI	GCNNNNNNNGC	7 cut(s)	198, 438, 447, 660, 808, 1154, 1238
BstNI	CCWGG	2 cut(s)	206, 1023
BstPAI	GACNNNNGTC	1 cut(s)	900
BstSCI	CCNGG	5 cut(s)	204, 324, 720, 1021, 1157
BstSFI	CTRYAG	3 cut(s)	114, 230, 611
BstSLI	GKGCMC	1 cut(s)	326
BstUI	CGCG	3 cut(s)	634, 759, 1212
BstV1I	GCAGC	7 cut(s)	323, 597, 617, 625, 707, 820, 1244
BstV2I	GAAGAC	3 cut(s)	54, 115, 1158
BstX2I	RGATCY	3 cut(s)	127, 133, 195
BstYI	RGATCY	3 cut(s)	127, 133, 195
BstZI	CGGCCG	2 cut(s)	520, 590
Bsu15I	ATCGAT	1 cut(s)	1200
BsuRI	GGCC	4 cut(s)	522, 592, 623, 1127
BsuTUI	ATCGAT	1 cut(s)	1200
BtgI	CCRYGG	2 cut(s)	260, 1128
BtrI	CACGTC	1 cut(s)	583
BtsI	GCAGTG	1 cut(s)	428
BtsIMutI	CAGTG	1 cut(s)	428
BtuMI	TCGCGA	2 cut(s)	634, 1212
BveI	ACCTGC	2 cut(s)	121, 497
Cac8I	GCNNGC	6 cut(s)	118, 625, 759, 954, 1237, 1243
CaiI	CAGNNNCTG	1 cut(s)	229
CciI	TCATGA	1 cut(s)	73
CfoI	GCGC	4 cut(s)	610, 759, 761, 1241
Cfr10I	RCCGGY	2 cut(s)	180, 761
Cfr13I	GGNCC	1 cut(s)	178
ClaI	ATCGAT	1 cut(s)	1200
CpoI	CGGWCCG	1 cut(s)	178
CseI	GACGC	3 cut(s)	233, 674, 1163
Csp6I	GTAC	2 cut(s)	184, 648
CspAI	ACCGGT	1 cut(s)	180
CspI	CGGWCCG	1 cut(s)	178
CviAII	CATG	1 cut(s)	74
CviQI	GTAC	2 cut(s)	184, 648
EaeI	YGGCCR	3 cut(s)	520, 590, 1125
EagI	CGGCCG	2 cut(s)	520, 590
Eam1104I	CTCTTC	1 cut(s)	1057
EarI	CTCTTC	1 cut(s)	1057
EciI	GGCGGA	2 cut(s)	99, 1205
EclXI	CGGCCG	2 cut(s)	520, 590
Eco130I	CCWWGG	1 cut(s)	364
Eco24I	GRGCYC	1 cut(s)	333
Eco31I	GGTCTC	1 cut(s)	213
Eco47I	GGWCC	1 cut(s)	178
Eco47III	AGCGCT	1 cut(s)	609
Eco52I	CGGCCG	2 cut(s)	520, 590
Eco57I	CTGAAG	4 cut(s)	293, 379, 830, 938
EcoRII	CCWGG	2 cut(s)	204, 1021
EcoT14I	CCWWGG	1 cut(s)	364
EcoT38I	GRGCYC	1 cut(s)	333
ErhI	CCWWGG	1 cut(s)	364
FaeI	CATG	1 cut(s)	77
FaqI	GGGAC	1 cut(s)	139
FatI	CATG	1 cut(s)	73
FauI	CCCGC	2 cut(s)	362, 891
FbaI	TGATCA	2 cut(s)	300, 946
FblI	GTMKAC	1 cut(s)	1073
FriOI	GRGCYC	1 cut(s)	333
FspBI	CTAG	2 cut(s)	365, 660
GlaI	GCGC	4 cut(s)	609, 758, 760, 1240
GsaI	CCCAGC	1 cut(s)	336
GsuI	CTGGAG	2 cut(s)	684, 1005
HaeII	RGCGCY	1 cut(s)	611
HaeIII	GGCC	4 cut(s)	522, 592, 623, 1127
HapII	CCGG	7 cut(s)	131, 181, 326, 593, 722, 762, 1159
HgaI	GACGC	3 cut(s)	233, 674, 1163
HhaI	GCGC	4 cut(s)	610, 759, 761, 1241
Hin1I	GRCGYC	4 cut(s)	244, 666, 1076, 1155
Hin1II	CATG	1 cut(s)	77
Hin6I	GCGC	4 cut(s)	608, 757, 759, 1239
HinP1I	GCGC	4 cut(s)	608, 757, 759, 1239
HincII	GTYRAC	1 cut(s)	1074
HindII	GTYRAC	1 cut(s)	1074
HinfI	GANTC	5 cut(s)	173, 226, 717, 769, 971
HpaII	CCGG	7 cut(s)	131, 181, 326, 593, 722, 762, 1159
HphI	GGTGA	2 cut(s)	310, 734
Hpy166II	GTNNAC	1 cut(s)	1074
Hpy188I	TCNGA	8 cut(s)	178, 216, 398, 466, 578, 918, 997, 1081
Hpy8I	GTNNAC	1 cut(s)	1074
Hpy99I	CGWCG	8 cut(s)	249, 380, 587, 622, 634, 668, 1078, 1081
HpyAV	CCTTC	2 cut(s)	304, 863
HpyCH4III	ACNGT	2 cut(s)	574, 791
HpyCH4IV	ACGT	3 cut(s)	186, 582, 1076
HpyF10VI	GCNNNNNNNGC	7 cut(s)	198, 438, 447, 660, 808, 1154, 1238
HpySE526I	ACGT	3 cut(s)	186, 582, 1076
Hsp92I	GRCGYC	4 cut(s)	244, 666, 1076, 1155
Hsp92II	CATG	1 cut(s)	77
HspAI	GCGC	4 cut(s)	608, 757, 759, 1239
Kpn2I	TCCGGA	1 cut(s)	130
Ksp22I	TGATCA	2 cut(s)	300, 946
LmnI	GCTCC	6 cut(s)	58, 86, 328, 446, 703, 855
Lsp1109I	GCAGC	7 cut(s)	323, 597, 617, 625, 707, 820, 1244
LweI	GCATC	3 cut(s)	225, 650, 1058
MaeI	CTAG	2 cut(s)	365, 660
MaeII	ACGT	3 cut(s)	186, 582, 1076
MaeIII	GTNAC	3 cut(s)	512, 683, 902
MbiI	CCGCTC	1 cut(s)	53
MflI	RGATCY	3 cut(s)	127, 133, 195
MhlI	GDGCHC	4 cut(s)	326, 333, 443, 558
MluCI	AATT	5 cut(s)	596, 670, 889, 985, 1121
MlyI	GAGTC	1 cut(s)	711
MmeI	TCCRAC	3 cut(s)	601, 1039, 1059
MroI	TCCGGA	1 cut(s)	130
MseI	TTAA	1 cut(s)	1041
MslI	CAYNNNNRTG	2 cut(s)	78, 510
MspA1I	CMGCKG	1 cut(s)	336
MspI	CCGG	7 cut(s)	131, 181, 326, 593, 722, 762, 1159
MspR9I	CCNGG	5 cut(s)	206, 326, 722, 1023, 1159
MvaI	CCWGG	2 cut(s)	206, 1023
MvnI	CGCG	3 cut(s)	634, 759, 1212
MwoI	GCNNNNNNNGC	7 cut(s)	198, 438, 447, 660, 808, 1154, 1238
NciI	CCSGG	3 cut(s)	326, 722, 1159
NlaIII	CATG	1 cut(s)	77
NlaIV	GGNNCC	5 cut(s)	88, 135, 258, 330, 496
NmuCI	GTSAC	2 cut(s)	512, 902
NruI	TCGCGA	2 cut(s)	634, 1212
PagI	TCATGA	1 cut(s)	73
PauI	GCGCGC	1 cut(s)	757
PcsI	WCGNNNNNNNCGW	2 cut(s)	366, 626
PfeI	GAWTC	4 cut(s)	173, 226, 769, 971
PinAI	ACCGGT	1 cut(s)	180
PleI	GAGTC	1 cut(s)	711
PpsI	GAGTC	1 cut(s)	711
Ppu21I	YACGTR	1 cut(s)	187
PshAI	GACNNNNGTC	1 cut(s)	900
Psp6I	CCWGG	2 cut(s)	204, 1021
PspFI	CCCAGC	1 cut(s)	332
PspGI	CCWGG	2 cut(s)	204, 1021
PspN4I	GGNNCC	5 cut(s)	88, 135, 258, 330, 496
PspPI	GGNCC	1 cut(s)	178
PstI	CTGCAG	3 cut(s)	118, 234, 615
PstNI	CAGNNNCTG	1 cut(s)	229
PsuI	RGATCY	3 cut(s)	127, 133, 195
PteI	GCGCGC	1 cut(s)	757
PvuII	CAGCTG	1 cut(s)	336
RruI	TCGCGA	2 cut(s)	634, 1212
RsaI	GTAC	2 cut(s)	185, 649
RsaNI	GTAC	2 cut(s)	184, 648
RseI	CAYNNNNRTG	2 cut(s)	78, 510
Rsr2I	CGGWCCG	1 cut(s)	178
RsrII	CGGWCCG	1 cut(s)	178
SalI	GTCGAC	1 cut(s)	1072
SaqAI	TTAA	1 cut(s)	1041
Sau96I	GGNCC	1 cut(s)	178
SbfI	CCTGCAGG	1 cut(s)	118
SchI	GAGTC	1 cut(s)	711
ScrFI	CCNGG	5 cut(s)	206, 326, 722, 1023, 1159
SdaI	CCTGCAGG	1 cut(s)	118
SduI	GDGCHC	4 cut(s)	326, 333, 443, 558
SfaNI	GCATC	3 cut(s)	225, 650, 1058
SfcI	CTRYAG	3 cut(s)	114, 230, 611
SinI	GGWCC	1 cut(s)	178
SmiMI	CAYNNNNRTG	2 cut(s)	78, 510
Sse8387I	CCTGCAGG	1 cut(s)	118
Sse9I	AATT	5 cut(s)	596, 670, 889, 985, 1121
SspMI	CTAG	2 cut(s)	365, 660
StyD4I	CCNGG	5 cut(s)	204, 324, 720, 1021, 1157
StyI	CCWWGG	1 cut(s)	364
TaaI	ACNGT	2 cut(s)	574, 791
TaiI	ACGT	3 cut(s)	189, 585, 1079
TaqI	TCGA	7 cut(s)	6, 171, 644, 926, 974, 1073, 1200
TasI	AATT	5 cut(s)	596, 670, 889, 985, 1121
TauI	GCSGC	3 cut(s)	41, 495, 522
TfiI	GAWTC	4 cut(s)	173, 226, 769, 971
Tru1I	TTAA	1 cut(s)	1041
Tru9I	TTAA	1 cut(s)	1041
TscAI	CASTG	1 cut(s)	428
TseFI	GTSAC	2 cut(s)	512, 902
TseI	GCWGC	7 cut(s)	336, 605, 610, 613, 695, 808, 1232
Tsp45I	GTSAC	2 cut(s)	512, 902
TspDTI	ATGAA	5 cut(s)	90, 538, 782, 978, 984
TspGWI	ACGGA	2 cut(s)	48, 846
TspRI	CASTG	1 cut(s)	428
VpaK11BI	GGWCC	1 cut(s)	178
XapI	RAATTY	1 cut(s)	889
XmaJI	CCTAGG	1 cut(s)	364
XmiI	GTMKAC	1 cut(s)	1073
XspI	CTAG	2 cut(s)	365, 660
ZraI	GACGTC	1 cut(s)	1077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.