pycom16g01650

Microtubule-associated protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
1023969 .. 1026612
2644 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1401 bp
ATGGAGGAGTTTTCCGGCGACGGAGGTTTGACTCCGATGACGGATTACAGTAACGGACCGTTTCACGGAGCTACGCCGACACCGCCGCCGCTGACGGTGTCCGGATCGTTCAAGGAGGGGAAGAGCTCATCGCGGAGGAGAGGATTCAGGAAACCGAGTATGGATGGCGACGAGTTGATAAACCTCTTGCACGGCTCGGATCCGGTCAAGGTCGAGCTCAATCGGCTCGAGAATGAAGTCAGAGATAAGGACCGGGAGCTAGGAGAGGCACAGGCTCAGATCAAGGCTCTCAAGCTCTCTGATAGAGCCAGAGAAAAAGCTTGTGAAGAGCTCACTGATGAGCTGTCGAAGGTGGAAGAAAAGCTGAAGTTAACTGAATCACTTCTAGAAAGCAAAAATCTTGAAATAAAGAAAATCAATGATGAGAAGAAAGCTTCCATGGCTGCTCAGTTTGCAGCTGAAGCTACTCTACGTAGGGTTCATGCTGCTCAAAAGGATGATGATATGCCTCCGATTGAAGCCATTCTTGCACCTCTGGAGGCTGAGCTAAAGCTTGCCCGGCAAGAGATTGCGAAGCTTCAAGATGATAACAAAGCTCTGGACCGCCTTACCAAATCAAAAGAAGCAGCTTTACTTGAGGCCGAGAGGACCGTTCAGGTTGCCTTGGCTAAGGCCTCCATGGTGGATGACCTTCAAAATAAAAACCAAGAGTTGATGAAACAGATAGAAATTTGTCAGGAAGAAAATAAGATTTTAGACAAGATGCATAGACAAAAGGTTGCTGAGGTTGAAAAGCTTACTCAGACTGTGCGGGAGTTGGAAGAGGCTGTTCTTGCTGGTGGTGCAGCGGCAAATGCTGTGAGGGATTATCAGCGGAAGTTTCAGGAGATGAATGAGGAAAGAAAAACTCTAGACCGGGAGTTGGCCCGTGCAAAAGTAACAGCAAATAGAGTAGCTGTAGTGGTAGCAAATGAGTGGAAAGACGCTAATGACAAAGTGATGCCTGTAAAACAGTGGCTGGAGGAACGGAGATTCTTGCAGGGAGAAATGCAGCAACTTCGTGACAAGCTTGCCATAACTGAGCGAGCTGCCAAGTCTGAAGCTCAATTGAAAGAAAAATATCATATGCGACTTAAAGTGCTTGAGGAGAGTGTGAGAGGTAACAGTCTTAGCCGCAGTACAGCAGAGGGAAGAAGTACAAGCAATGGACCCTCTCGACGTCAGTCCCTGGGTGGGGCTGATAACCCTCCAAAATTAACTTCCAATGGCTTTTTATCCAAGAGAGCTCCTGTCAGGTCTTTGACCTCCAGCACCAGTTCAGTGTTAAAGCATGCTAAAGGTACATCAAAATCATTTGATGGTGGTACAATCGATCATTGGACAGGGGTAAGGTTAACTTGA

Protein Analysis

467

Amino Acids

52.03

Weight (kDa)

8.52

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP70 PF07058 57 - 456 1e-229 Microtubule-associated protein 70
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1222
AccII CGCG 1 cut(s) 133
AccIII TCCGGA 1 cut(s) 101
AciI CCGC 9 cut(s) 83, 86, 89, 133, 604, 811, 848, 874, 1174
AclWI GGATC 3 cut(s) 112, 194, 207
AcsI RAATTY 1 cut(s) 729
AcuI CTGAAG 3 cut(s) 386, 480, 1119
AcyI GRCGYC 1 cut(s) 1219
AfaI GTAC 4 cut(s) 1180, 1198, 1342, 1366
AfiI CCNNNNNNNGG 4 cut(s) 65, 922, 1233, 1234
AgsI TTSAA 7 cut(s) 112, 404, 518, 581, 695, 791, 1111
AjnI CCWGG 1 cut(s) 1227
AjuI GAANNNNNNNTTGG 2 cut(s) 1243, 1275
Alw21I GWGCWC 4 cut(s) 128, 219, 333, 1288
AlwI GGATC 3 cut(s) 112, 194, 207
AlwNI CAGNNNCTG 2 cut(s) 1018, 1228
Ama87I CYCGRG 1 cut(s) 227
Aor13HI TCCGGA 1 cut(s) 101
AoxI GGCC 3 cut(s) 639, 672, 924
ApeKI GCWGC 7 cut(s) 443, 455, 485, 626, 845, 1051, 1088
ApoI RAATTY 1 cut(s) 729
Asp700I GAANNNNTTC 2 cut(s) 381, 522
AspS9I GGNCC 6 cut(s) 56, 250, 601, 648, 925, 1208
AsuC2I CCSGG 3 cut(s) 254, 559, 917
AvaI CYCGRG 1 cut(s) 227
AvaII GGWCC 5 cut(s) 56, 250, 601, 648, 1208
BamHI GGATCC 1 cut(s) 199
BanII GRGCYC 4 cut(s) 128, 219, 333, 1288
BarI GAAGNNNNNNTAC 4 cut(s) 453, 485, 615, 647
Bbv12I GWGCWC 4 cut(s) 128, 219, 333, 1288
BbvCI CCTCAGC 1 cut(s) 783
BbvI GCAGC 7 cut(s) 430, 467, 472, 638, 857, 1063, 1075
BccI CCATC 2 cut(s) 158, 1352
BceAI ACGGC 1 cut(s) 208
BcgI CGANNNNNNTGC 2 cut(s) 1040, 1074
BciT130I CCWGG 1 cut(s) 1229
BcnI CCSGG 3 cut(s) 254, 559, 917
BfaI CTAG 3 cut(s) 260, 386, 911
BfmI CTRYAG 1 cut(s) 957
BlpI GCTNAGC 1 cut(s) 543
Bme1390I CCNGG 4 cut(s) 254, 559, 917, 1229
Bme18I GGWCC 5 cut(s) 56, 250, 601, 648, 1208
BmeT110I CYCGRG 1 cut(s) 227
BmgT120I GGNCC 6 cut(s) 56, 250, 601, 648, 925, 1208
BmiI GGNNCC 2 cut(s) 201, 1210
BmrFI CCNGG 4 cut(s) 254, 559, 917, 1229
BmsI GCATC 2 cut(s) 753, 990
BoxI GACNNNNGTC 1 cut(s) 1222
BpmI CTGGAG 3 cut(s) 557, 1040, 1291
Bpu10I CCTNAGC 2 cut(s) 669, 783
Bpu1102I GCTNAGC 1 cut(s) 543
BpuEI CTTGAG 3 cut(s) 275, 656, 1163
BpuMI CCSGG 3 cut(s) 254, 559, 917
Bsa29I ATCGAT 1 cut(s) 1371
BsaAI YACGTR 1 cut(s) 473
BsaHI GRCGYC 1 cut(s) 1219
BsaJI CCNNGG 5 cut(s) 438, 663, 678, 1227, 1228
BsaWI WCCGGW 2 cut(s) 101, 202
Bsc4I CCNNNNNNNGG 4 cut(s) 65, 922, 1233, 1234
Bse1I ACTGG 1 cut(s) 1314
Bse3DI GCAATG 1 cut(s) 1210
BseAI TCCGGA 1 cut(s) 101
BseBI CCWGG 1 cut(s) 1229
BseCI ATCGAT 1 cut(s) 1371
BseDI CCNNGG 5 cut(s) 438, 663, 678, 1227, 1228
BseGI GGATG 3 cut(s) 169, 502, 691
BseLI CCNNNNNNNGG 4 cut(s) 65, 922, 1233, 1234
BseMI GCAATG 1 cut(s) 1210
BseMII CTCAG 6 cut(s) 290, 461, 534, 774, 815, 1071
BseNI ACTGG 1 cut(s) 1314
BseRI GAGGAG 3 cut(s) 20, 151, 1160
BseXI GCAGC 7 cut(s) 430, 467, 472, 638, 857, 1063, 1075
BsgI GTGCAG 1 cut(s) 864
Bsh1236I CGCG 1 cut(s) 133
BshFI GGCC 3 cut(s) 641, 674, 926
BshVI ATCGAT 1 cut(s) 1371
BsiHKAI GWGCWC 4 cut(s) 128, 219, 333, 1288
BsiHKCI CYCGRG 1 cut(s) 227
BsiSI CCGG 6 cut(s) 15, 102, 203, 253, 559, 916
BslFI GGGAC 1 cut(s) 1210
BslI CCNNNNNNNGG 4 cut(s) 65, 922, 1233, 1234
BsmFI GGGAC 1 cut(s) 1210
BsnI GGCC 3 cut(s) 641, 674, 926
BsoBI CYCGRG 1 cut(s) 227
Bsp1286I GDGCHC 4 cut(s) 128, 219, 333, 1288
Bsp13I TCCGGA 1 cut(s) 101
Bsp143I GATC 4 cut(s) 104, 199, 279, 1372
Bsp1720I GCTNAGC 1 cut(s) 543
Bsp19I CCATGG 2 cut(s) 438, 678
BspACI CCGC 9 cut(s) 83, 86, 89, 133, 604, 811, 848, 874, 1174
BspANI GGCC 3 cut(s) 641, 674, 926
BspCNI CTCAG 6 cut(s) 289, 460, 535, 775, 814, 1072
BspDI ATCGAT 1 cut(s) 1371
BspEI TCCGGA 1 cut(s) 101
BspFNI CGCG 1 cut(s) 133
BspLI GGNNCC 2 cut(s) 201, 1210
BspPI GGATC 3 cut(s) 112, 194, 207
BspQI GCTCTTC 2 cut(s) 116, 321
BsrDI GCAATG 1 cut(s) 1210
BsrI ACTGG 1 cut(s) 1314
BssECI CCNNGG 5 cut(s) 438, 663, 678, 1227, 1228
BssMI GATC 4 cut(s) 104, 199, 279, 1372
BssNI GRCGYC 1 cut(s) 1219
BssT1I CCWWGG 3 cut(s) 438, 663, 678
Bst2UI CCWGG 1 cut(s) 1229
Bst4CI ACNGT 7 cut(s) 50, 60, 97, 652, 808, 1014, 1166
Bst6I CTCTTC 3 cut(s) 116, 321, 816
BstACI GRCGYC 1 cut(s) 1219
BstBAI YACGTR 1 cut(s) 473
BstC8I GCNNGC 4 cut(s) 555, 1071, 1086, 1332
BstDEI CTNAG 8 cut(s) 276, 447, 543, 669, 783, 801, 1080, 1169
BstDSI CCRYGG 2 cut(s) 438, 678
BstF5I GGATG 3 cut(s) 169, 502, 691
BstFNI CGCG 1 cut(s) 133
BstKTI GATC 4 cut(s) 107, 202, 282, 1375
BstMBI GATC 4 cut(s) 104, 199, 279, 1372
BstNI CCWGG 1 cut(s) 1229
BstNSI RCATGY 1 cut(s) 1334
BstPAI GACNNNNGTC 1 cut(s) 1222
BstSCI CCNGG 4 cut(s) 252, 557, 915, 1227
BstSFI CTRYAG 1 cut(s) 957
BstSNI TACGTA 1 cut(s) 473
BstUI CGCG 1 cut(s) 133
BstV1I GCAGC 7 cut(s) 430, 467, 472, 638, 857, 1063, 1075
BstX2I RGATCY 1 cut(s) 199
BstYI RGATCY 1 cut(s) 199
Bsu15I ATCGAT 1 cut(s) 1371
BsuRI GGCC 3 cut(s) 641, 674, 926
BsuTUI ATCGAT 1 cut(s) 1371
BtgI CCRYGG 2 cut(s) 438, 678
BtgZI GCGATG 1 cut(s) 114
BtsCI GGATG 3 cut(s) 169, 502, 691
BtsIMutI CAGTG 3 cut(s) 333, 1019, 1326
Cac8I GCNNGC 4 cut(s) 555, 1071, 1086, 1332
CaiI CAGNNNCTG 2 cut(s) 1018, 1228
Cfr13I GGNCC 6 cut(s) 56, 250, 601, 648, 925, 1208
ClaI ATCGAT 1 cut(s) 1371
CpoI CGGWCCG 1 cut(s) 56
CseI GACGC 1 cut(s) 992
Csp6I GTAC 4 cut(s) 1179, 1197, 1341, 1365
CspI CGGWCCG 1 cut(s) 56
CviAII CATG 4 cut(s) 439, 482, 679, 1331
CviQI GTAC 4 cut(s) 1179, 1197, 1341, 1365
DdeI CTNAG 8 cut(s) 276, 447, 543, 669, 783, 801, 1080, 1169
DpnI GATC 4 cut(s) 106, 201, 281, 1374
DpnII GATC 4 cut(s) 104, 199, 279, 1372
Eam1104I CTCTTC 3 cut(s) 116, 321, 816
EarI CTCTTC 3 cut(s) 116, 321, 816
Ecl136II GAGCTC 4 cut(s) 126, 217, 331, 1286
Eco105I TACGTA 1 cut(s) 473
Eco130I CCWWGG 3 cut(s) 438, 663, 678
Eco147I AGGCCT 1 cut(s) 674
Eco24I GRGCYC 4 cut(s) 128, 219, 333, 1288
Eco47I GGWCC 5 cut(s) 56, 250, 601, 648, 1208
Eco53kI GAGCTC 4 cut(s) 126, 217, 331, 1286
Eco57I CTGAAG 3 cut(s) 386, 480, 1119
Eco88I CYCGRG 1 cut(s) 227
EcoICRI GAGCTC 4 cut(s) 126, 217, 331, 1286
EcoRII CCWGG 1 cut(s) 1227
EcoT14I CCWWGG 3 cut(s) 438, 663, 678
EcoT22I ATGCAT 1 cut(s) 768
EcoT38I GRGCYC 4 cut(s) 128, 219, 333, 1288
ErhI CCWWGG 3 cut(s) 438, 663, 678
FaeI CATG 4 cut(s) 442, 485, 682, 1334
FalI AAGNNNNNCTT 3 cut(s) 510, 542, 1381
FaqI GGGAC 1 cut(s) 1210
FatI CATG 4 cut(s) 438, 481, 678, 1330
FauI CCCGC 1 cut(s) 804
FauNDI CATATG 1 cut(s) 1125
FokI GGATG 3 cut(s) 176, 509, 698
FriOI GRGCYC 4 cut(s) 128, 219, 333, 1288
FspBI CTAG 3 cut(s) 260, 386, 911
GsuI CTGGAG 3 cut(s) 557, 1040, 1291
HaeIII GGCC 3 cut(s) 641, 674, 926
HapII CCGG 6 cut(s) 15, 102, 203, 253, 559, 916
HgaI GACGC 1 cut(s) 992
Hin1I GRCGYC 1 cut(s) 1219
Hin1II CATG 4 cut(s) 442, 485, 682, 1334
HincII GTYRAC 2 cut(s) 372, 1395
HindII GTYRAC 2 cut(s) 372, 1395
HindIII AAGCTT 6 cut(s) 318, 432, 551, 575, 794, 1067
HinfI GANTC 4 cut(s) 31, 144, 377, 1032
HpaI GTTAAC 2 cut(s) 372, 1395
HpaII CCGG 6 cut(s) 15, 102, 203, 253, 559, 916
Hpy166II GTNNAC 2 cut(s) 372, 1395
Hpy188I TCNGA 8 cut(s) 36, 199, 242, 279, 301, 513, 804, 1099
Hpy8I GTNNAC 2 cut(s) 372, 1395
Hpy99I CGWCG 3 cut(s) 23, 173, 1221
HpyAV CCTTC 2 cut(s) 343, 701
HpyCH4III ACNGT 7 cut(s) 50, 60, 97, 652, 808, 1014, 1166
HpyCH4IV ACGT 2 cut(s) 472, 1219
HpyCH4V TGCA 8 cut(s) 190, 455, 530, 766, 845, 932, 1039, 1051
HpyF3I CTNAG 8 cut(s) 276, 447, 543, 669, 783, 801, 1080, 1169
HpySE526I ACGT 2 cut(s) 472, 1219
Hsp92I GRCGYC 1 cut(s) 1219
Hsp92II CATG 4 cut(s) 442, 485, 682, 1334
Kpn2I TCCGGA 1 cut(s) 101
KspAI GTTAAC 2 cut(s) 372, 1395
Kzo9I GATC 4 cut(s) 104, 199, 279, 1372
LguI GCTCTTC 2 cut(s) 116, 321
LmnI GCTCC 3 cut(s) 68, 256, 1291
Lsp1109I GCAGC 7 cut(s) 430, 467, 472, 638, 857, 1063, 1075
LweI GCATC 2 cut(s) 753, 990
MaeI CTAG 3 cut(s) 260, 386, 911
MaeII ACGT 2 cut(s) 472, 1219
MaeIII GTNAC 4 cut(s) 50, 937, 1061, 1160
MalI GATC 4 cut(s) 106, 201, 281, 1374
MboI GATC 4 cut(s) 104, 199, 279, 1372
MboII GAAGA 7 cut(s) 133, 338, 368, 439, 752, 833, 1203
MfeI CAATTG 1 cut(s) 1106
MflI RGATCY 1 cut(s) 199
MhlI GDGCHC 4 cut(s) 128, 219, 333, 1288
MluCI AATT 3 cut(s) 729, 1106, 1253
MlyI GAGTC 1 cut(s) 25
MmeI TCCRAC 1 cut(s) 798
Mph1103I ATGCAT 1 cut(s) 768
MroI TCCGGA 1 cut(s) 101
MroXI GAANNNNTTC 2 cut(s) 381, 522
MseI TTAA 5 cut(s) 371, 1134, 1256, 1325, 1394
MspA1I CMGCKG 4 cut(s) 91, 458, 848, 874
MspI CCGG 6 cut(s) 15, 102, 203, 253, 559, 916
MspR9I CCNGG 4 cut(s) 254, 559, 917, 1229
MunI CAATTG 1 cut(s) 1106
MvaI CCWGG 1 cut(s) 1229
MvnI CGCG 1 cut(s) 133
NciI CCSGG 3 cut(s) 254, 559, 917
NcoI CCATGG 2 cut(s) 438, 678
NdeI CATATG 1 cut(s) 1125
NdeII GATC 4 cut(s) 104, 199, 279, 1372
NlaIII CATG 4 cut(s) 442, 485, 682, 1334
NlaIV GGNNCC 2 cut(s) 201, 1210
NmeAIII GCCGAG 1 cut(s) 667
NmuCI GTSAC 1 cut(s) 1061
NsiI ATGCAT 1 cut(s) 768
NspI RCATGY 1 cut(s) 1334
PaeI GCATGC 1 cut(s) 1334
PaeR7I CTCGAG 1 cut(s) 227
PasI CCCWGGG 1 cut(s) 1228
PceI AGGCCT 1 cut(s) 674
PciSI GCTCTTC 2 cut(s) 116, 321
PdmI GAANNNNTTC 2 cut(s) 381, 522
PfeI GAWTC 3 cut(s) 144, 377, 1032
PflFI GACNNNGTC 1 cut(s) 97
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
Ppu21I YACGTR 1 cut(s) 473
PshAI GACNNNNGTC 1 cut(s) 1222
Psp124BI GAGCTC 4 cut(s) 128, 219, 333, 1288
Psp6I CCWGG 1 cut(s) 1227
PspGI CCWGG 1 cut(s) 1227
PspN4I GGNNCC 2 cut(s) 201, 1210
PspPI GGNCC 6 cut(s) 56, 250, 601, 648, 925, 1208
PstNI CAGNNNCTG 2 cut(s) 1018, 1228
PsuI RGATCY 1 cut(s) 199
PsyI GACNNNGTC 1 cut(s) 97
PvuII CAGCTG 1 cut(s) 458
RsaI GTAC 4 cut(s) 1180, 1198, 1342, 1366
RsaNI GTAC 4 cut(s) 1179, 1197, 1341, 1365
Rsr2I CGGWCCG 1 cut(s) 56
RsrII CGGWCCG 1 cut(s) 56
SacI GAGCTC 4 cut(s) 128, 219, 333, 1288
SapI GCTCTTC 2 cut(s) 116, 321
SaqAI TTAA 5 cut(s) 371, 1134, 1256, 1325, 1394
Sau3AI GATC 4 cut(s) 104, 199, 279, 1372
Sau96I GGNCC 6 cut(s) 56, 250, 601, 648, 925, 1208
SchI GAGTC 1 cut(s) 25
ScrFI CCNGG 4 cut(s) 254, 559, 917, 1229
SduI GDGCHC 4 cut(s) 128, 219, 333, 1288
SfaNI GCATC 2 cut(s) 753, 990
SfcI CTRYAG 1 cut(s) 957
Sfr274I CTCGAG 1 cut(s) 227
SinI GGWCC 5 cut(s) 56, 250, 601, 648, 1208
SlaI CTCGAG 1 cut(s) 227
SmlI CTYRAG 4 cut(s) 227, 290, 635, 1142
SmoI CTYRAG 4 cut(s) 227, 290, 635, 1142
SnaBI TACGTA 1 cut(s) 473
SphI GCATGC 1 cut(s) 1334
Sse9I AATT 3 cut(s) 729, 1106, 1253
SseBI AGGCCT 1 cut(s) 674
SsiI CCGC 9 cut(s) 83, 86, 89, 133, 604, 811, 848, 874, 1174
SspMI CTAG 3 cut(s) 260, 386, 911
SstI GAGCTC 4 cut(s) 128, 219, 333, 1288
StuI AGGCCT 1 cut(s) 674
StyD4I CCNGG 4 cut(s) 252, 557, 915, 1227
StyI CCWWGG 3 cut(s) 438, 663, 678
TaaI ACNGT 7 cut(s) 50, 60, 97, 652, 808, 1014, 1166
TaiI ACGT 2 cut(s) 475, 1222
TaqI TCGA 5 cut(s) 213, 228, 347, 1216, 1371
TasI AATT 3 cut(s) 729, 1106, 1253
TatI WGTACW 2 cut(s) 1178, 1196
TauI GCSGC 4 cut(s) 88, 91, 851, 1176
TfiI GAWTC 3 cut(s) 144, 377, 1032
Tru1I TTAA 5 cut(s) 371, 1134, 1256, 1325, 1394
Tru9I TTAA 5 cut(s) 371, 1134, 1256, 1325, 1394
TscAI CASTG 3 cut(s) 340, 1019, 1326
TseFI GTSAC 1 cut(s) 1061
TseI GCWGC 7 cut(s) 443, 455, 485, 626, 845, 1051, 1088
Tsp45I GTSAC 1 cut(s) 1061
TspDTI ATGAA 4 cut(s) 249, 470, 731, 905
TspGWI ACGGA 5 cut(s) 36, 56, 69, 81, 1042
TspRI CASTG 3 cut(s) 340, 1019, 1326
Tth111I GACNNNGTC 1 cut(s) 97
VpaK11BI GGWCC 5 cut(s) 56, 250, 601, 648, 1208
XapI RAATTY 1 cut(s) 729
XbaI TCTAGA 2 cut(s) 385, 910
XceI RCATGY 1 cut(s) 1334
XhoI CTCGAG 1 cut(s) 227
XmnI GAANNNNTTC 2 cut(s) 381, 522
XspI CTAG 3 cut(s) 260, 386, 911
ZraI GACGTC 1 cut(s) 1220
Zsp2I ATGCAT 1 cut(s) 768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.