PKHD-type hydroxylase At1g22950-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22950 |
| fragaria_vesca | FvH4_4g26460 FvH4_4g26460 FvH4_4g26460 |
| malus_domestica | MD13G1033500.v1.1 MD16G1035400.v1.1 |
| prunus_persica | Prupe.1G319300_v2.0.a1 Prupe.1G319300_v2.0.a1 Prupe.1G319300_v2.0.a1 Prupe.1G319300_v2.0.a1 Prupe.1G319300_v2.0.a1 Prupe.1G319300_v2.0.a1 Prupe.1G319300_v2.0.a1 |
| pyrus_communis | pycom13g02890 pycom16g03030 |
| rosa_chinensis | RchiOBHm_Chr4g0434101 |
| rosa_laevigata | RLG00000006700 |
| rosa_multiflora | Rmu_sc0000352.1_g000033 |
| rosa_roxburghii | Rroxscaffold_5G00375500 |
| rosa_rugosa | Rorug04G0273600 Rorug04G0273700 Rorug04G0273800 Rorug04G0273900 Rorug04G0274000 Rorug04G0274100 |
| rosa_samantha | Rh4AG329300 Rh4BG336700 Rh4CG352100 Rh4DG332800 |
| rosa_wichuraiana | Rw4G028540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1334 |
| AccI | GTMKAC | 3 cut(s) | 355, 1144, 1885 |
| AccII | CGCG | 1 cut(s) | 1463 |
| AclWI | GGATC | 6 cut(s) | 505, 1069, 1120, 1572, 2130, 2143 |
| AcsI | RAATTY | 5 cut(s) | 568, 799, 1379, 1969, 1996 |
| AcuI | CTGAAG | 5 cut(s) | 133, 228, 1606, 1913, 2483 |
| AcvI | CACGTG | 1 cut(s) | 1670 |
| AcyI | GRCGYC | 1 cut(s) | 2413 |
| AfaI | GTAC | 4 cut(s) | 95, 1688, 1712, 1805 |
| AfeI | AGCGCT | 1 cut(s) | 1637 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 650, 1058, 1904, 2129 |
| AflII | CTTAAG | 1 cut(s) | 2564 |
| AflIII | ACRYGT | 1 cut(s) | 2299 |
| AgeI | ACCGGT | 1 cut(s) | 1707 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 203 |
| AhlI | ACTAGT | 1 cut(s) | 815 |
| AjnI | CCWGG | 6 cut(s) | 555, 805, 1051, 1590, 1903, 2058 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2102, 2134, 2225, 2257 |
| AleI | CACNNNNGTG | 1 cut(s) | 1293 |
| Alw26I | GTCTC | 3 cut(s) | 1540, 1985, 2306 |
| AlwI | GGATC | 6 cut(s) | 505, 1069, 1120, 1572, 2130, 2143 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 421, 454, 838 |
| Ama87I | CYCGRG | 3 cut(s) | 343, 1718, 2350 |
| Aor51HI | AGCGCT | 1 cut(s) | 1637 |
| AoxI | GGCC | 5 cut(s) | 721, 744, 754, 1478, 2056 |
| ApoI | RAATTY | 5 cut(s) | 568, 799, 1379, 1969, 1996 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 766, 798 |
| AsiGI | ACCGGT | 1 cut(s) | 1707 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 287, 1926, 1971 |
| AspLEI | GCGC | 3 cut(s) | 1463, 1638, 2532 |
| AspS9I | GGNCC | 5 cut(s) | 609, 722, 744, 1468, 1588 |
| AsuC2I | CCSGG | 7 cut(s) | 344, 345, 725, 1140, 2123, 2351, 2352 |
| AsuHPI | GGTGA | 7 cut(s) | 231, 867, 1005, 1056, 1107, 1707, 2218 |
| AvaI | CYCGRG | 3 cut(s) | 343, 1718, 2350 |
| AvaII | GGWCC | 3 cut(s) | 609, 1468, 1588 |
| BaeGI | GKGCMC | 1 cut(s) | 350 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2023, 2056 |
| BamHI | GGATCC | 1 cut(s) | 2135 |
| BauI | CACGAG | 1 cut(s) | 1734 |
| BbrPI | CACGTG | 1 cut(s) | 1670 |
| BbsI | GAAGAC | 1 cut(s) | 1448 |
| BccI | CCATC | 5 cut(s) | 134, 196, 2077, 2388, 2567 |
| BceAI | ACGGC | 1 cut(s) | 1474 |
| BciT130I | CCWGG | 6 cut(s) | 557, 807, 1053, 1592, 1905, 2060 |
| BciVI | GTATCC | 1 cut(s) | 2140 |
| BclI | TGATCA | 1 cut(s) | 733 |
| BcnI | CCSGG | 7 cut(s) | 344, 345, 725, 1140, 2123, 2351, 2352 |
| BcoDI | GTCTC | 3 cut(s) | 1540, 1985, 2306 |
| BcuI | ACTAGT | 1 cut(s) | 815 |
| BfaI | CTAG | 4 cut(s) | 105, 171, 816, 2394 |
| BfmI | CTRYAG | 2 cut(s) | 1076, 1327 |
| BfoI | RGCGCY | 2 cut(s) | 1639, 2533 |
| BfrI | CTTAAG | 1 cut(s) | 2564 |
| BfuAI | ACCTGC | 1 cut(s) | 1334 |
| BfuI | GTATCC | 1 cut(s) | 2140 |
| Bme18I | GGWCC | 3 cut(s) | 609, 1468, 1588 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 203 |
| BmeT110I | CYCGRG | 3 cut(s) | 343, 1718, 2350 |
| BmgT120I | GGNCC | 5 cut(s) | 609, 722, 744, 1468, 1588 |
| BmiI | GGNNCC | 2 cut(s) | 1312, 2137 |
| BmrI | ACTGGG | 2 cut(s) | 786, 1067 |
| BmuI | ACTGGG | 2 cut(s) | 786, 1067 |
| BpiI | GAAGAC | 1 cut(s) | 1448 |
| BpmI | CTGGAG | 5 cut(s) | 315, 1613, 1652, 1667, 1926 |
| BpuEI | CTTGAG | 3 cut(s) | 625, 790, 1661 |
| BpuMI | CCSGG | 7 cut(s) | 344, 345, 725, 1140, 2123, 2351, 2352 |
| BsaAI | YACGTR | 2 cut(s) | 1295, 1670 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2151 |
| BsaHI | GRCGYC | 1 cut(s) | 2413 |
| BsaJI | CCNNGG | 7 cut(s) | 132, 230, 343, 556, 644, 757, 2350 |
| BsaWI | WCCGGW | 3 cut(s) | 898, 949, 1707 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 650, 1058, 1904, 2129 |
| Bse118I | RCCGGY | 1 cut(s) | 1707 |
| Bse3DI | GCAATG | 2 cut(s) | 375, 661 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2151 |
| BseBI | CCWGG | 6 cut(s) | 557, 807, 1053, 1592, 1905, 2060 |
| BseDI | CCNNGG | 7 cut(s) | 132, 230, 343, 556, 644, 757, 2350 |
| BseGI | GGATG | 7 cut(s) | 645, 856, 943, 1137, 1149, 2194, 2218 |
| BseJI | GATNNNNATC | 1 cut(s) | 2151 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 650, 1058, 1904, 2129 |
| BseMI | GCAATG | 2 cut(s) | 375, 661 |
| BseMII | CTCAG | 8 cut(s) | 77, 385, 731, 1487, 1535, 1858, 1950, 2313 |
| BseRI | GAGGAG | 1 cut(s) | 525 |
| BseSI | GKGCMC | 1 cut(s) | 350 |
| BsgI | GTGCAG | 2 cut(s) | 318, 2458 |
| Bsh1236I | CGCG | 1 cut(s) | 1463 |
| BshFI | GGCC | 5 cut(s) | 723, 746, 756, 1480, 2058 |
| BshTI | ACCGGT | 1 cut(s) | 1707 |
| BsiHKCI | CYCGRG | 3 cut(s) | 343, 1718, 2350 |
| BslFI | GGGAC | 7 cut(s) | 240, 573, 1596, 1709, 1817, 2333, 2367 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 650, 1058, 1904, 2129 |
| BsmAI | GTCTC | 3 cut(s) | 1540, 1985, 2306 |
| BsmFI | GGGAC | 7 cut(s) | 240, 573, 1596, 1709, 1817, 2333, 2367 |
| BsmI | GAATGC | 1 cut(s) | 40 |
| BsnI | GGCC | 5 cut(s) | 723, 746, 756, 1480, 2058 |
| BsoBI | CYCGRG | 3 cut(s) | 343, 1718, 2350 |
| Bsp1286I | GDGCHC | 1 cut(s) | 350 |
| Bsp1407I | TGTACA | 1 cut(s) | 1803 |
| BspANI | GGCC | 5 cut(s) | 723, 746, 756, 1480, 2058 |
| BspCNI | CTCAG | 8 cut(s) | 76, 384, 732, 1488, 1536, 1857, 1951, 2314 |
| BspFNI | CGCG | 1 cut(s) | 1463 |
| BspLI | GGNNCC | 2 cut(s) | 1312, 2137 |
| BspMAI | CTGCAG | 2 cut(s) | 1080, 1331 |
| BspMI | ACCTGC | 1 cut(s) | 1334 |
| BspPI | GGATC | 6 cut(s) | 505, 1069, 1120, 1572, 2130, 2143 |
| BspQI | GCTCTTC | 1 cut(s) | 1625 |
| BspTI | CTTAAG | 1 cut(s) | 2564 |
| BsrDI | GCAATG | 2 cut(s) | 375, 661 |
| BsrFI | RCCGGY | 1 cut(s) | 1707 |
| BsrGI | TGTACA | 1 cut(s) | 1803 |
| BssAI | RCCGGY | 1 cut(s) | 1707 |
| BssECI | CCNNGG | 7 cut(s) | 132, 230, 343, 556, 644, 757, 2350 |
| BssNAI | GTATAC | 3 cut(s) | 356, 1145, 1886 |
| BssNI | GRCGYC | 1 cut(s) | 2413 |
| BssSI | CACGAG | 1 cut(s) | 1734 |
| BssT1I | CCWWGG | 4 cut(s) | 132, 230, 644, 757 |
| Bst1107I | GTATAC | 3 cut(s) | 356, 1145, 1886 |
| Bst2BI | CACGAG | 1 cut(s) | 1734 |
| Bst2UI | CCWGG | 6 cut(s) | 557, 807, 1053, 1592, 1905, 2060 |
| Bst4CI | ACNGT | 6 cut(s) | 327, 879, 1285, 1890, 2036, 2159 |
| Bst6I | CTCTTC | 2 cut(s) | 1428, 1625 |
| BstACI | GRCGYC | 1 cut(s) | 2413 |
| BstAFI | CTTAAG | 1 cut(s) | 2564 |
| BstAUI | TGTACA | 1 cut(s) | 1803 |
| BstBAI | YACGTR | 2 cut(s) | 1295, 1670 |
| BstC8I | GCNNGC | 4 cut(s) | 366, 710, 1628, 1815 |
| BstDEI | CTNAG | 9 cut(s) | 63, 251, 371, 740, 1496, 1544, 1844, 1959, 2322 |
| BstF5I | GGATG | 7 cut(s) | 645, 856, 943, 1137, 1149, 2194, 2218 |
| BstFNI | CGCG | 1 cut(s) | 1463 |
| BstH2I | RGCGCY | 2 cut(s) | 1639, 2533 |
| BstHHI | GCGC | 3 cut(s) | 1463, 1638, 2532 |
| BstMAI | GTCTC | 3 cut(s) | 1540, 1985, 2306 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 412, 847, 940, 1036, 1081, 1486, 1492, 1527, 1642 |
| BstNI | CCWGG | 6 cut(s) | 557, 807, 1053, 1592, 1905, 2060 |
| BstNSI | RCATGY | 2 cut(s) | 2303, 2360 |
| BstSFI | CTRYAG | 2 cut(s) | 1076, 1327 |
| BstSLI | GKGCMC | 1 cut(s) | 350 |
| BstUI | CGCG | 1 cut(s) | 1463 |
| BstV2I | GAAGAC | 1 cut(s) | 1448 |
| BstX2I | RGATCY | 1 cut(s) | 2135 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 563, 1295, 2387 |
| BstYI | RGATCY | 1 cut(s) | 2135 |
| BstZ17I | GTATAC | 3 cut(s) | 356, 1145, 1886 |
| BsuI | GTATCC | 1 cut(s) | 2140 |
| BsuRI | GGCC | 5 cut(s) | 723, 746, 756, 1480, 2058 |
| BtsCI | GGATG | 7 cut(s) | 645, 856, 943, 1137, 1149, 2194, 2218 |
| BtsI | GCAGTG | 2 cut(s) | 688, 1312 |
| BtsIMutI | CAGTG | 8 cut(s) | 74, 164, 688, 860, 911, 1312, 1861, 2141 |
| BveI | ACCTGC | 1 cut(s) | 1334 |
| Cac8I | GCNNGC | 4 cut(s) | 366, 710, 1628, 1815 |
| CaiI | CAGNNNCTG | 3 cut(s) | 421, 454, 838 |
| CfoI | GCGC | 3 cut(s) | 1463, 1638, 2532 |
| Cfr10I | RCCGGY | 1 cut(s) | 1707 |
| Cfr13I | GGNCC | 5 cut(s) | 609, 722, 744, 1468, 1588 |
| Cfr9I | CCCGGG | 2 cut(s) | 343, 2350 |
| CpoI | CGGWCCG | 1 cut(s) | 1468 |
| CseI | GACGC | 2 cut(s) | 460, 2402 |
| Csp6I | GTAC | 4 cut(s) | 94, 1687, 1711, 1804 |
| CspAI | ACCGGT | 1 cut(s) | 1707 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2476, 2511 |
| CspI | CGGWCCG | 1 cut(s) | 1468 |
| CviQI | GTAC | 4 cut(s) | 94, 1687, 1711, 1804 |
| DdeI | CTNAG | 9 cut(s) | 63, 251, 371, 740, 1496, 1544, 1844, 1959, 2322 |
| DraI | TTTAAA | 1 cut(s) | 699 |
| DriI | GACNNNNNGTC | 1 cut(s) | 203 |
| Eam1104I | CTCTTC | 2 cut(s) | 1428, 1625 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 203 |
| EarI | CTCTTC | 2 cut(s) | 1428, 1625 |
| EciI | GGCGGA | 2 cut(s) | 1481, 1589 |
| Eco130I | CCWWGG | 4 cut(s) | 132, 230, 644, 757 |
| Eco47I | GGWCC | 3 cut(s) | 609, 1468, 1588 |
| Eco47III | AGCGCT | 1 cut(s) | 1637 |
| Eco57I | CTGAAG | 5 cut(s) | 133, 228, 1606, 1913, 2483 |
| Eco72I | CACGTG | 1 cut(s) | 1670 |
| Eco88I | CYCGRG | 3 cut(s) | 343, 1718, 2350 |
| EcoO109I | RGGNCCY | 2 cut(s) | 609, 1588 |
| EcoRII | CCWGG | 6 cut(s) | 555, 805, 1051, 1590, 1903, 2058 |
| EcoT14I | CCWWGG | 4 cut(s) | 132, 230, 644, 757 |
| EcoT22I | ATGCAT | 3 cut(s) | 858, 945, 1098 |
| ErhI | CCWWGG | 4 cut(s) | 132, 230, 644, 757 |
| FaqI | GGGAC | 7 cut(s) | 240, 573, 1596, 1709, 1817, 2333, 2367 |
| FbaI | TGATCA | 1 cut(s) | 733 |
| FblI | GTMKAC | 3 cut(s) | 355, 1144, 1885 |
| FokI | GGATG | 7 cut(s) | 652, 843, 930, 1136, 1144, 2201, 2225 |
| FspBI | CTAG | 4 cut(s) | 105, 171, 816, 2394 |
| GlaI | GCGC | 3 cut(s) | 1462, 1637, 2531 |
| GsuI | CTGGAG | 5 cut(s) | 315, 1613, 1652, 1667, 1926 |
| HaeII | RGCGCY | 2 cut(s) | 1639, 2533 |
| HaeIII | GGCC | 5 cut(s) | 723, 746, 756, 1480, 2058 |
| HgaI | GACGC | 2 cut(s) | 460, 2402 |
| HhaI | GCGC | 3 cut(s) | 1463, 1638, 2532 |
| Hin1I | GRCGYC | 1 cut(s) | 2413 |
| Hin6I | GCGC | 3 cut(s) | 1461, 1636, 2530 |
| HinP1I | GCGC | 3 cut(s) | 1461, 1636, 2530 |
| HincII | GTYRAC | 1 cut(s) | 2422 |
| HindII | GTYRAC | 1 cut(s) | 2422 |
| HinfI | GANTC | 7 cut(s) | 418, 552, 959, 1436, 2004, 2216, 2418 |
| HphI | GGTGA | 7 cut(s) | 231, 867, 1005, 1056, 1107, 1707, 2218 |
| Hpy166II | GTNNAC | 7 cut(s) | 356, 790, 1145, 1288, 1806, 1886, 2422 |
| Hpy188III | TCNNGA | 6 cut(s) | 246, 294, 501, 1430, 1751, 2045 |
| Hpy8I | GTNNAC | 7 cut(s) | 356, 790, 1145, 1288, 1806, 1886, 2422 |
| Hpy99I | CGWCG | 2 cut(s) | 1476, 2418 |
| HpyAV | CCTTC | 4 cut(s) | 83, 222, 252, 746 |
| HpyCH4III | ACNGT | 6 cut(s) | 327, 879, 1285, 1890, 2036, 2159 |
| HpyCH4IV | ACGT | 3 cut(s) | 1294, 1669, 2509 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 412, 847, 940, 1036, 1081, 1486, 1492, 1527, 1642 |
| HpyF3I | CTNAG | 9 cut(s) | 63, 251, 371, 740, 1496, 1544, 1844, 1959, 2322 |
| HpySE526I | ACGT | 3 cut(s) | 1294, 1669, 2509 |
| Hsp92I | GRCGYC | 1 cut(s) | 2413 |
| HspAI | GCGC | 3 cut(s) | 1461, 1636, 2530 |
| Ksp22I | TGATCA | 1 cut(s) | 733 |
| LguI | GCTCTTC | 1 cut(s) | 1625 |
| LmnI | GCTCC | 5 cut(s) | 1302, 1594, 1633, 1686, 2458 |
| MaeI | CTAG | 4 cut(s) | 105, 171, 816, 2394 |
| MaeII | ACGT | 3 cut(s) | 1294, 1669, 2509 |
| MaeIII | GTNAC | 6 cut(s) | 514, 811, 1394, 1670, 1954, 2224 |
| MfeI | CAATTG | 2 cut(s) | 845, 2538 |
| MflI | RGATCY | 1 cut(s) | 2135 |
| MhlI | GDGCHC | 1 cut(s) | 350 |
| MlyI | GAGTC | 3 cut(s) | 561, 1445, 2427 |
| MmeI | TCCRAC | 4 cut(s) | 1147, 1280, 1581, 2511 |
| Mph1103I | ATGCAT | 3 cut(s) | 858, 945, 1098 |
| MroXI | GAANNNNTTC | 3 cut(s) | 287, 1926, 1971 |
| MseI | TTAA | 5 cut(s) | 669, 698, 824, 2304, 2565 |
| MslI | CAYNNNNRTG | 5 cut(s) | 77, 263, 1293, 2211, 2385 |
| MspA1I | CMGCKG | 2 cut(s) | 838, 1129 |
| MspCI | CTTAAG | 1 cut(s) | 2564 |
| MunI | CAATTG | 2 cut(s) | 845, 2538 |
| Mva1269I | GAATGC | 1 cut(s) | 40 |
| MvaI | CCWGG | 6 cut(s) | 557, 807, 1053, 1592, 1905, 2060 |
| MvnI | CGCG | 1 cut(s) | 1463 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 412, 847, 940, 1036, 1081, 1486, 1492, 1527, 1642 |
| NciI | CCSGG | 7 cut(s) | 344, 345, 725, 1140, 2123, 2351, 2352 |
| NlaIV | GGNNCC | 2 cut(s) | 1312, 2137 |
| NmuCI | GTSAC | 4 cut(s) | 811, 1394, 1670, 2224 |
| NsiI | ATGCAT | 3 cut(s) | 858, 945, 1098 |
| NspI | RCATGY | 2 cut(s) | 2303, 2360 |
| OliI | CACNNNNGTG | 1 cut(s) | 1293 |
| PciI | ACATGT | 1 cut(s) | 2299 |
| PciSI | GCTCTTC | 1 cut(s) | 1625 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1518, 1741, 2284 |
| PctI | GAATGC | 1 cut(s) | 40 |
| PdmI | GAANNNNTTC | 3 cut(s) | 287, 1926, 1971 |
| PfeI | GAWTC | 4 cut(s) | 418, 959, 2004, 2216 |
| PflFI | GACNNNGTC | 1 cut(s) | 252 |
| PfoI | TCCNGGA | 2 cut(s) | 1903, 2121 |
| PinAI | ACCGGT | 1 cut(s) | 1707 |
| PleI | GAGTC | 3 cut(s) | 560, 1444, 2426 |
| PmaCI | CACGTG | 1 cut(s) | 1670 |
| PmlI | CACGTG | 1 cut(s) | 1670 |
| PpsI | GAGTC | 3 cut(s) | 560, 1444, 2426 |
| Ppu21I | YACGTR | 2 cut(s) | 1295, 1670 |
| PpuMI | RGGWCCY | 2 cut(s) | 609, 1588 |
| PscI | ACATGT | 1 cut(s) | 2299 |
| Psp5II | RGGWCCY | 2 cut(s) | 609, 1588 |
| Psp6I | CCWGG | 6 cut(s) | 555, 805, 1051, 1590, 1903, 2058 |
| PspCI | CACGTG | 1 cut(s) | 1670 |
| PspGI | CCWGG | 6 cut(s) | 555, 805, 1051, 1590, 1903, 2058 |
| PspN4I | GGNNCC | 2 cut(s) | 1312, 2137 |
| PspPI | GGNCC | 5 cut(s) | 609, 722, 744, 1468, 1588 |
| PspPPI | RGGWCCY | 2 cut(s) | 609, 1588 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 876, 908 |
| PstI | CTGCAG | 2 cut(s) | 1080, 1331 |
| PstNI | CAGNNNCTG | 3 cut(s) | 421, 454, 838 |
| PsuI | RGATCY | 1 cut(s) | 2135 |
| PsyI | GACNNNGTC | 1 cut(s) | 252 |
| PvuII | CAGCTG | 1 cut(s) | 838 |
| RsaI | GTAC | 4 cut(s) | 95, 1688, 1712, 1805 |
| RsaNI | GTAC | 4 cut(s) | 94, 1687, 1711, 1804 |
| RseI | CAYNNNNRTG | 5 cut(s) | 77, 263, 1293, 2211, 2385 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1468 |
| RsrII | CGGWCCG | 1 cut(s) | 1468 |
| SapI | GCTCTTC | 1 cut(s) | 1625 |
| SaqAI | TTAA | 5 cut(s) | 669, 698, 824, 2304, 2565 |
| Sau96I | GGNCC | 5 cut(s) | 609, 722, 744, 1468, 1588 |
| SchI | GAGTC | 3 cut(s) | 561, 1445, 2427 |
| SduI | GDGCHC | 1 cut(s) | 350 |
| SfcI | CTRYAG | 2 cut(s) | 1076, 1327 |
| SinI | GGWCC | 3 cut(s) | 609, 1468, 1588 |
| SmaI | CCCGGG | 2 cut(s) | 345, 2352 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 77, 263, 1293, 2211, 2385 |
| SmlI | CTYRAG | 4 cut(s) | 604, 769, 1676, 2564 |
| SmoI | CTYRAG | 4 cut(s) | 604, 769, 1676, 2564 |
| SpeI | ACTAGT | 1 cut(s) | 815 |
| SspMI | CTAG | 4 cut(s) | 105, 171, 816, 2394 |
| StyI | CCWWGG | 4 cut(s) | 132, 230, 644, 757 |
| TaaI | ACNGT | 6 cut(s) | 327, 879, 1285, 1890, 2036, 2159 |
| TaiI | ACGT | 3 cut(s) | 1297, 1672, 2512 |
| TaqI | TCGA | 9 cut(s) | 196, 1280, 1439, 1535, 1750, 2278, 2287, 2383, 2416 |
| TaqII | GACCGA | 2 cut(s) | 1485, 2437 |
| TatI | WGTACW | 2 cut(s) | 1686, 1803 |
| TauI | GCSGC | 5 cut(s) | 406, 749, 1466, 1489, 2546 |
| TfiI | GAWTC | 4 cut(s) | 418, 959, 2004, 2216 |
| Tru1I | TTAA | 5 cut(s) | 669, 698, 824, 2304, 2565 |
| Tru9I | TTAA | 5 cut(s) | 669, 698, 824, 2304, 2565 |
| TscAI | CASTG | 8 cut(s) | 81, 164, 688, 867, 918, 1312, 1861, 2148 |
| TseFI | GTSAC | 4 cut(s) | 811, 1394, 1670, 2224 |
| Tsp45I | GTSAC | 4 cut(s) | 811, 1394, 1670, 2224 |
| TspDTI | ATGAA | 9 cut(s) | 17, 95, 475, 1224, 1339, 1346, 2039, 2195, 2357 |
| TspGWI | ACGGA | 5 cut(s) | 638, 652, 1469, 1489, 1527 |
| TspMI | CCCGGG | 2 cut(s) | 343, 2350 |
| TspRI | CASTG | 8 cut(s) | 81, 164, 688, 867, 918, 1312, 1861, 2148 |
| Tth111I | GACNNNGTC | 1 cut(s) | 252 |
| Vha464I | CTTAAG | 1 cut(s) | 2564 |
| VpaK11BI | GGWCC | 3 cut(s) | 609, 1468, 1588 |
| XapI | RAATTY | 5 cut(s) | 568, 799, 1379, 1969, 1996 |
| XceI | RCATGY | 2 cut(s) | 2303, 2360 |
| XmaI | CCCGGG | 2 cut(s) | 343, 2350 |
| XmiI | GTMKAC | 3 cut(s) | 355, 1144, 1885 |
| XmnI | GAANNNNTTC | 3 cut(s) | 287, 1926, 1971 |
| XspI | CTAG | 4 cut(s) | 105, 171, 816, 2394 |
| Zsp2I | ATGCAT | 3 cut(s) | 858, 945, 1098 |