pycom16g08240

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
5437680 .. 5438825
1146 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g08240.1

Sequence Viewer

Length: 1146 bp
ATGGCGCCTGAGCAGGTTCAAATTCCGACCAAAATATCCAGAAACGAAGACCAGGAAGAATCTCCGCTCTACGGAGACATCTTAGAGGCCATACTCTACCACGTGCCTCTCCTCCATCTCGTCCCTGCCTGCCACGTGTCCAAGTCTTGGAACCGCGCGGTCTTCTCCTCCCTCCGCCACCTCAACCGAAACGTCAAACCCTGGCTCATCGTCCTCTCCCAAACCACCTGGCCTCCCTACAAGACCACCGCACGTGCCTACGACCCCGCCTCGCACGCATGGATAGATATCCACTCTCAGCCGTCGAGCAAATCCATCTCCACCCTCCGATCCTCTCACTCCAAACTCCTCTACATGCTCTCTCCCTCCAAATTCGCCTTCTCAACCGATCCCCTCCACCGCACGTGGCACCACGTGGACGCCCCTCTCGTCTGGCGCACCGACCCGATTGTCGCGCTGGTCGGCCACCGCATAGTCGTCGCAGGCGGCACCTGCGAATACGAGGACGACCCCCTGGCCGTCGAAATTTACGACACGAGGGAGCGAAGGTGGTGCACGTGCAACTCAATGCCCGCTATCCTAAAGGACTCCGCGGCCTCCACGTGGCTCTCTGTCGCCGTGGACGACAGCAAAATGTACGTGACAGATAAAAACACCGGTTTGACCTACACGTTCGATCCCGACTCCAGGACGTGGAGTGGACCGTACGATCTGTGTCCCGACGGTACGGTGATCGGCGCCACGACCGGATTCGCTAACGGCTGTTTCATTTTGGTGGAAGCGATCGGAAGCGAGGTGCATTTGAAAGGCGTGAAAGTGTGGGAAATGAACGGCTTGTCATTTGAGTGCAAAAAGTTGATCGGGGAGATGCCCCCGGCGATGATGGCGAAGCTGAAGGGCGAGAGCGACTGCGCAGGGACGGTTTCGATGAGCTGCACGAGAGATATGGTGTGCCTGCATAACCCTTGGTCGCCGGAGGAGCTGATTCTCTGCGAGCTTGTCGACGGCGGGTGCAGGTGGGGGAGTGTACGGAATGCAGTTGTGAACGGCGGGACTCGAATGCAGAAGCTGGTGGTGACGTGTTCGAATGTGGGATTGCCGGATTTGCACAAAGCCGTACAAGTTGGAGCGCTGAAAGTGGTTTGA

Protein Analysis

382

Amino Acids

42.16

Weight (kDa)

6.39

Isoelectric Point (pI)

48.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_FKB95 PF25210 95 - 233 8.1e-08 FKB95, Kelch-repeats domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 500, 1005
AasI GACNNNNNNGTC 1 cut(s) 449
Acc16I TGCGCA 1 cut(s) 913
Acc36I ACCTGC 3 cut(s) 4, 500, 1005
AccB1I GGYRCC 4 cut(s) 4, 408, 488, 737
AccB7I CCANNNNNTGG 2 cut(s) 147, 693
AccBSI CCGCTC 1 cut(s) 67
AccI GTMKAC 1 cut(s) 1002
AccII CGCG 4 cut(s) 156, 158, 455, 593
AclWI GGATC 3 cut(s) 324, 383, 671
AcoI YGGCCR 2 cut(s) 463, 516
AcsI RAATTY 3 cut(s) 21, 371, 525
AcuI CTGAAG 1 cut(s) 914
AcvI CACGTG 7 cut(s) 103, 136, 254, 405, 415, 558, 603
AcyI GRCGYC 3 cut(s) 5, 420, 738
AdeI CACNNNGTG 1 cut(s) 415
AfaI GTAC 5 cut(s) 638, 707, 727, 1029, 1119
AfeI AGCGCT 1 cut(s) 1131
AfiI CCNNNNNNNGG 5 cut(s) 71, 147, 603, 687, 693
AflIII ACRYGT 3 cut(s) 135, 669, 1079
AgeI ACCGGT 1 cut(s) 656
AgsI TTSAA 2 cut(s) 20, 805
AjiI CACGTC 2 cut(s) 693, 1080
AjnI CCWGG 5 cut(s) 51, 200, 227, 513, 686
AjuI GAANNNNNNNTTGG 2 cut(s) 362, 394
AluBI AGCT 5 cut(s) 892, 933, 982, 997, 1069
AluI AGCT 5 cut(s) 892, 933, 982, 997, 1069
Alw21I GWGCWC 1 cut(s) 557
Alw26I GTCTC 1 cut(s) 69
Alw44I GTGCAC 1 cut(s) 553
AlwI GGATC 3 cut(s) 324, 383, 671
AlwNI CAGNNNCTG 1 cut(s) 1069
Aor51HI AGCGCT 1 cut(s) 1131
AoxI GGCC 5 cut(s) 87, 230, 463, 516, 594
ApaLI GTGCAC 1 cut(s) 553
ApeKI GCWGC 1 cut(s) 933
ApoI RAATTY 3 cut(s) 21, 371, 525
AsiGI ACCGGT 1 cut(s) 656
AspLEI GCGC 7 cut(s) 7, 158, 438, 457, 740, 914, 1132
AspS9I GGNCC 1 cut(s) 701
AsuC2I CCSGG 1 cut(s) 875
AsuHPI GGTGA 2 cut(s) 742, 1087
AsuII TTCGAA 1 cut(s) 1085
AvaII GGWCC 1 cut(s) 701
BaeGI GKGCMC 1 cut(s) 557
BanI GGYRCC 4 cut(s) 4, 408, 488, 737
BauI CACGAG 2 cut(s) 535, 937
BbrPI CACGTG 7 cut(s) 103, 136, 254, 405, 415, 558, 603
BbsI GAAGAC 2 cut(s) 54, 154
Bbv12I GWGCWC 1 cut(s) 557
BbvI GCAGC 1 cut(s) 920
BccI CCATC 3 cut(s) 123, 323, 877
BceAI ACGGC 8 cut(s) 286, 503, 602, 775, 847, 1021, 1063, 1100
BcgI CGANNNNNNTGC 4 cut(s) 460, 494, 534, 568
BciT130I CCWGG 5 cut(s) 53, 202, 229, 515, 688
BcnI CCSGG 1 cut(s) 875
BcoDI GTCTC 1 cut(s) 69
BfoI RGCGCY 3 cut(s) 8, 741, 1133
BfuAI ACCTGC 3 cut(s) 4, 500, 1005
BisI GCNGC 3 cut(s) 487, 594, 934
BlsI GCNGC 3 cut(s) 488, 595, 935
Bme1390I CCNGG 6 cut(s) 53, 202, 229, 515, 688, 875
Bme18I GGWCC 1 cut(s) 701
BmgBI CACGTC 2 cut(s) 693, 1080
BmgT120I GGNCC 1 cut(s) 701
BmiI GGNNCC 5 cut(s) 6, 152, 410, 490, 739
BmrFI CCNGG 6 cut(s) 53, 202, 229, 515, 688, 875
BmsI GCATC 1 cut(s) 858
BpiI GAAGAC 2 cut(s) 54, 154
BpmI CTGGAG 1 cut(s) 670
Bpu10I CCTNAGC 1 cut(s) 9
Bpu14I TTCGAA 1 cut(s) 1085
BpuMI CCSGG 1 cut(s) 875
BsaAI YACGTR 8 cut(s) 103, 136, 254, 405, 415, 558, 603, 640
BsaBI GATNNNNATC 1 cut(s) 287
BsaHI GRCGYC 3 cut(s) 5, 420, 738
BsaJI CCNNGG 6 cut(s) 200, 513, 591, 618, 873, 965
BsaWI WCCGGW 2 cut(s) 656, 746
BsaXI ACNNNNNCTCC 4 cut(s) 217, 247, 533, 563
Bsc4I CCNNNNNNNGG 5 cut(s) 71, 147, 603, 687, 693
Bse118I RCCGGY 1 cut(s) 656
Bse8I GATNNNNATC 1 cut(s) 287
BseBI CCWGG 5 cut(s) 53, 202, 229, 515, 688
BseDI CCNNGG 6 cut(s) 200, 513, 591, 618, 873, 965
BseJI GATNNNNATC 1 cut(s) 287
BseLI CCNNNNNNNGG 5 cut(s) 71, 147, 603, 687, 693
BseMII CTCAG 1 cut(s) 311
BseRI GAGGAG 4 cut(s) 101, 157, 338, 992
BseSI GKGCMC 1 cut(s) 557
BseXI GCAGC 1 cut(s) 920
BsgI GTGCAG 2 cut(s) 919, 1033
Bsh1236I CGCG 4 cut(s) 156, 158, 455, 593
Bsh1285I CGRYCG 2 cut(s) 747, 786
BshFI GGCC 5 cut(s) 89, 232, 465, 518, 596
BshNI GGYRCC 4 cut(s) 4, 408, 488, 737
BshTI ACCGGT 1 cut(s) 656
BsiEI CGRYCG 2 cut(s) 747, 786
BsiHKAI GWGCWC 1 cut(s) 557
BsiSI CCGG 5 cut(s) 657, 747, 875, 974, 1100
BsiWI CGTACG 1 cut(s) 705
BslFI GGGAC 4 cut(s) 107, 702, 931, 1066
BslI CCNNNNNNNGG 5 cut(s) 71, 147, 603, 687, 693
BsmAI GTCTC 1 cut(s) 69
BsmFI GGGAC 4 cut(s) 107, 702, 931, 1066
BsmI GAATGC 2 cut(s) 1039, 1065
BsnI GGCC 5 cut(s) 89, 232, 465, 518, 596
Bsp119I TTCGAA 1 cut(s) 1085
Bsp1286I GDGCHC 1 cut(s) 557
Bsp143I GATC 7 cut(s) 329, 388, 676, 709, 732, 783, 858
BspANI GGCC 5 cut(s) 89, 232, 465, 518, 596
BspCNI CTCAG 1 cut(s) 310
BspFNI CGCG 4 cut(s) 156, 158, 455, 593
BspLI GGNNCC 5 cut(s) 6, 152, 410, 490, 739
BspMI ACCTGC 3 cut(s) 4, 500, 1005
BspPI GGATC 3 cut(s) 324, 383, 671
BspT104I TTCGAA 1 cut(s) 1085
BspT107I GGYRCC 4 cut(s) 4, 408, 488, 737
BsrBI CCGCTC 1 cut(s) 67
BsrFI RCCGGY 1 cut(s) 656
BssAI RCCGGY 1 cut(s) 656
BssECI CCNNGG 6 cut(s) 200, 513, 591, 618, 873, 965
BssMI GATC 7 cut(s) 329, 388, 676, 709, 732, 783, 858
BssNI GRCGYC 3 cut(s) 5, 420, 738
BssSI CACGAG 2 cut(s) 535, 937
BssT1I CCWWGG 1 cut(s) 965
Bst2BI CACGAG 2 cut(s) 535, 937
Bst2UI CCWGG 5 cut(s) 53, 202, 229, 515, 688
Bst4CI ACNGT 4 cut(s) 705, 725, 730, 922
BstACI GRCGYC 3 cut(s) 5, 420, 738
BstBAI YACGTR 8 cut(s) 103, 136, 254, 405, 415, 558, 603, 640
BstBI TTCGAA 1 cut(s) 1085
BstC8I GCNNGC 6 cut(s) 130, 276, 484, 573, 956, 995
BstDEI CTNAG 3 cut(s) 9, 82, 297
BstDSI CCRYGG 2 cut(s) 591, 618
BstFNI CGCG 4 cut(s) 156, 158, 455, 593
BstH2I RGCGCY 3 cut(s) 8, 741, 1133
BstHHI GCGC 7 cut(s) 7, 158, 438, 457, 740, 914, 1132
BstKTI GATC 7 cut(s) 332, 391, 679, 712, 735, 786, 861
BstMAI GTCTC 1 cut(s) 69
BstMBI GATC 7 cut(s) 329, 388, 676, 709, 732, 783, 858
BstMCI CGRYCG 2 cut(s) 747, 786
BstMWI GCNNNNNNNGC 5 cut(s) 275, 492, 884, 979, 1105
BstNI CCWGG 5 cut(s) 53, 202, 229, 515, 688
BstNSI RCATGY 1 cut(s) 358
BstSCI CCNGG 6 cut(s) 51, 200, 227, 513, 686, 873
BstSLI GKGCMC 1 cut(s) 557
BstUI CGCG 4 cut(s) 156, 158, 455, 593
BstV1I GCAGC 1 cut(s) 920
BstV2I GAAGAC 2 cut(s) 54, 154
BsuRI GGCC 5 cut(s) 89, 232, 465, 518, 596
BtgI CCRYGG 2 cut(s) 591, 618
BtgZI GCGATG 1 cut(s) 893
BtrI CACGTC 2 cut(s) 693, 1080
BveI ACCTGC 3 cut(s) 4, 500, 1005
Cac8I GCNNGC 6 cut(s) 130, 276, 484, 573, 956, 995
CaiI CAGNNNCTG 1 cut(s) 1069
CfoI GCGC 7 cut(s) 7, 158, 438, 457, 740, 914, 1132
Cfr10I RCCGGY 1 cut(s) 656
Cfr13I GGNCC 1 cut(s) 701
Cfr42I CCGCGG 1 cut(s) 594
CseI GACGC 1 cut(s) 428
Csp6I GTAC 5 cut(s) 637, 706, 726, 1028, 1118
CspAI ACCGGT 1 cut(s) 656
CviAII CATG 2 cut(s) 279, 355
CviQI GTAC 5 cut(s) 637, 706, 726, 1028, 1118
DdeI CTNAG 3 cut(s) 9, 82, 297
DinI GGCGCC 2 cut(s) 6, 739
DpnI GATC 7 cut(s) 331, 390, 678, 711, 734, 785, 860
DpnII GATC 7 cut(s) 329, 388, 676, 709, 732, 783, 858
DraIII CACNNNGTG 1 cut(s) 415
DrdI GACNNNNNNGTC 1 cut(s) 449
DseDI GACNNNNNNGTC 1 cut(s) 449
EaeI YGGCCR 2 cut(s) 463, 516
EciI GGCGGA 1 cut(s) 164
Eco130I CCWWGG 1 cut(s) 965
Eco32I GATATC 1 cut(s) 289
Eco47I GGWCC 1 cut(s) 701
Eco47III AGCGCT 1 cut(s) 1131
Eco57I CTGAAG 1 cut(s) 914
Eco72I CACGTG 7 cut(s) 103, 136, 254, 405, 415, 558, 603
EcoRII CCWGG 5 cut(s) 51, 200, 227, 513, 686
EcoRV GATATC 1 cut(s) 289
EcoT14I CCWWGG 1 cut(s) 965
EgeI GGCGCC 2 cut(s) 6, 739
EheI GGCGCC 2 cut(s) 6, 739
ErhI CCWWGG 1 cut(s) 965
FaeI CATG 2 cut(s) 282, 358
FaiI YATR 6 cut(s) 92, 280, 356, 473, 947, 960
FaqI GGGAC 4 cut(s) 107, 702, 931, 1066
FatI CATG 2 cut(s) 278, 354
FauI CCCGC 4 cut(s) 274, 580, 1001, 1043
FblI GTMKAC 1 cut(s) 1002
Fnu4HI GCNGC 3 cut(s) 487, 594, 934
Fsp4HI GCNGC 3 cut(s) 487, 594, 934
FspI TGCGCA 1 cut(s) 913
GlaI GCGC 7 cut(s) 6, 157, 437, 456, 739, 913, 1131
GluI GCNGC 3 cut(s) 487, 594, 934
GsuI CTGGAG 1 cut(s) 670
HaeII RGCGCY 3 cut(s) 8, 741, 1133
HaeIII GGCC 5 cut(s) 89, 232, 465, 518, 596
HapII CCGG 5 cut(s) 657, 747, 875, 974, 1100
HgaI GACGC 1 cut(s) 428
HhaI GCGC 7 cut(s) 7, 158, 438, 457, 740, 914, 1132
Hin1I GRCGYC 3 cut(s) 5, 420, 738
Hin1II CATG 2 cut(s) 282, 358
Hin6I GCGC 7 cut(s) 5, 156, 436, 455, 738, 912, 1130
HinP1I GCGC 7 cut(s) 5, 156, 436, 455, 738, 912, 1130
HincII GTYRAC 1 cut(s) 1003
HindII GTYRAC 1 cut(s) 1003
HinfI GANTC 6 cut(s) 59, 587, 683, 750, 985, 1054
HpaII CCGG 5 cut(s) 657, 747, 875, 974, 1100
HphI GGTGA 2 cut(s) 742, 1087
Hpy166II GTNNAC 7 cut(s) 418, 555, 622, 701, 1003, 1028, 1045
Hpy188I TCNGA 3 cut(s) 27, 329, 788
Hpy188III TCNNGA 3 cut(s) 39, 680, 719
Hpy8I GTNNAC 7 cut(s) 418, 555, 622, 701, 1003, 1028, 1045
Hpy99I CGWCG 5 cut(s) 307, 482, 524, 725, 1007
HpyAV CCTTC 3 cut(s) 388, 540, 889
HpyCH4III ACNGT 4 cut(s) 705, 725, 730, 922
HpyF10VI GCNNNNNNNGC 5 cut(s) 275, 492, 884, 979, 1105
HpyF3I CTNAG 3 cut(s) 9, 82, 297
Hsp92I GRCGYC 3 cut(s) 5, 420, 738
Hsp92II CATG 2 cut(s) 282, 358
HspAI GCGC 7 cut(s) 5, 156, 436, 455, 738, 912, 1130
KasI GGCGCC 2 cut(s) 4, 737
KspI CCGCGG 1 cut(s) 594
Kzo9I GATC 7 cut(s) 329, 388, 676, 709, 732, 783, 858
LmnI GCTCC 3 cut(s) 541, 979, 1127
Lsp1109I GCAGC 1 cut(s) 920
LweI GCATC 1 cut(s) 858
MaeIII GTNAC 2 cut(s) 640, 1075
MalI GATC 7 cut(s) 331, 390, 678, 711, 734, 785, 860
MbiI CCGCTC 1 cut(s) 67
MboI GATC 7 cut(s) 329, 388, 676, 709, 732, 783, 858
MboII GAAGA 3 cut(s) 59, 68, 154
MhlI GDGCHC 1 cut(s) 557
MluCI AATT 3 cut(s) 21, 371, 525
Mly113I GGCGCC 2 cut(s) 5, 738
MlyI GAGTC 3 cut(s) 581, 677, 1048
MmeI TCCRAC 2 cut(s) 50, 1105
MslI CAYNNNNRTG 2 cut(s) 773, 844
MspA1I CMGCKG 1 cut(s) 593
MspI CCGG 5 cut(s) 657, 747, 875, 974, 1100
MspR9I CCNGG 6 cut(s) 53, 202, 229, 515, 688, 875
Mva1269I GAATGC 2 cut(s) 1039, 1065
MvaI CCWGG 5 cut(s) 53, 202, 229, 515, 688
MvnI CGCG 4 cut(s) 156, 158, 455, 593
MwoI GCNNNNNNNGC 5 cut(s) 275, 492, 884, 979, 1105
NarI GGCGCC 2 cut(s) 5, 738
NciI CCSGG 1 cut(s) 875
NdeII GATC 7 cut(s) 329, 388, 676, 709, 732, 783, 858
NlaIII CATG 2 cut(s) 282, 358
NlaIV GGNNCC 5 cut(s) 6, 152, 410, 490, 739
NmuCI GTSAC 2 cut(s) 640, 1075
NsbI TGCGCA 1 cut(s) 913
NspI RCATGY 1 cut(s) 358
NspV TTCGAA 1 cut(s) 1085
PaqCI CACCTGC 2 cut(s) 500, 1005
PcsI WCGNNNNNNNCGW 3 cut(s) 426, 528, 621
PctI GAATGC 2 cut(s) 1039, 1065
PfeI GAWTC 3 cut(s) 59, 750, 985
Pfl23II CGTACG 1 cut(s) 705
PflMI CCANNNNNTGG 2 cut(s) 147, 693
PfoI TCCNGGA 1 cut(s) 686
PinAI ACCGGT 1 cut(s) 656
PkrI GCNGC 3 cut(s) 488, 595, 935
Ple19I CGATCG 1 cut(s) 786
PleI GAGTC 3 cut(s) 581, 677, 1048
PluTI GGCGCC 2 cut(s) 8, 741
PmaCI CACGTG 7 cut(s) 103, 136, 254, 405, 415, 558, 603
PmlI CACGTG 7 cut(s) 103, 136, 254, 405, 415, 558, 603
PpsI GAGTC 3 cut(s) 581, 677, 1048
Ppu21I YACGTR 8 cut(s) 103, 136, 254, 405, 415, 558, 603, 640
Psp6I CCWGG 5 cut(s) 51, 200, 227, 513, 686
PspCI CACGTG 7 cut(s) 103, 136, 254, 405, 415, 558, 603
PspGI CCWGG 5 cut(s) 51, 200, 227, 513, 686
PspLI CGTACG 1 cut(s) 705
PspN4I GGNNCC 5 cut(s) 6, 152, 410, 490, 739
PspPI GGNCC 1 cut(s) 701
PstNI CAGNNNCTG 1 cut(s) 1069
PvuI CGATCG 1 cut(s) 786
RsaI GTAC 5 cut(s) 638, 707, 727, 1029, 1119
RsaNI GTAC 5 cut(s) 637, 706, 726, 1028, 1118
RseI CAYNNNNRTG 2 cut(s) 773, 844
SacII CCGCGG 1 cut(s) 594
SalI GTCGAC 1 cut(s) 1001
SatI GCNGC 3 cut(s) 487, 594, 934
Sau3AI GATC 7 cut(s) 329, 388, 676, 709, 732, 783, 858
Sau96I GGNCC 1 cut(s) 701
SchI GAGTC 3 cut(s) 581, 677, 1048
ScrFI CCNGG 6 cut(s) 53, 202, 229, 515, 688, 875
SduI GDGCHC 1 cut(s) 557
SfaNI GCATC 1 cut(s) 858
SfoI GGCGCC 2 cut(s) 6, 739
Sfr303I CCGCGG 1 cut(s) 594
SfuI TTCGAA 1 cut(s) 1085
SgrBI CCGCGG 1 cut(s) 594
SinI GGWCC 1 cut(s) 701
SmiMI CAYNNNNRTG 2 cut(s) 773, 844
Sse9I AATT 3 cut(s) 21, 371, 525
SspDI GGCGCC 2 cut(s) 4, 737
StyD4I CCNGG 6 cut(s) 51, 200, 227, 513, 686, 873
StyI CCWWGG 1 cut(s) 965
TaaI ACNGT 4 cut(s) 705, 725, 730, 922
TaqI TCGA 7 cut(s) 305, 522, 675, 926, 1002, 1057, 1085
TasI AATT 3 cut(s) 21, 371, 525
TauI GCSGC 2 cut(s) 489, 596
TfiI GAWTC 3 cut(s) 59, 750, 985
TseFI GTSAC 2 cut(s) 640, 1075
TseI GCWGC 1 cut(s) 933
Tsp45I GTSAC 2 cut(s) 640, 1075
TspDTI ATGAA 2 cut(s) 757, 842
TspGWI ACGGA 2 cut(s) 87, 1045
Van91I CCANNNNNTGG 2 cut(s) 147, 693
VneI GTGCAC 1 cut(s) 553
VpaK11BI GGWCC 1 cut(s) 701
XapI RAATTY 3 cut(s) 21, 371, 525
XceI RCATGY 1 cut(s) 358
XmiI GTMKAC 1 cut(s) 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.