Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17070 AT3G17070 AT3G42570 |
| fragaria_vesca | FvH4_4g19850 |
| malus_domestica | MD13G1152800.v1.1 MD16G1153200.v1.1 |
| prunus_persica | Prupe.1G116500_v2.0.a1 Prupe.1G116500_v2.0.a1 Prupe.1G116500_v2.0.a1 |
| pyrus_communis | pycom13g13040 pycom16g13010 |
| rosa_chinensis | RchiOBHm_Chr4g0425421 |
| rosa_laevigata | RLG00000007370 |
| rosa_roxburghii | Rroxscaffold_5G00367380 |
| rosa_rugosa | Rorug04G0202800 |
| rosa_samantha | Rh4CG277200 Rh4DG261900 |
| rosa_wichuraiana | Rw4G022510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 408 |
| AciI | CCGC | 3 cut(s) | 84, 194, 471 |
| AclWI | GGATC | 2 cut(s) | 44, 57 |
| AcoI | YGGCCR | 3 cut(s) | 81, 375, 472 |
| AfaI | GTAC | 1 cut(s) | 480 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 22, 112, 314 |
| AgsI | TTSAA | 6 cut(s) | 39, 146, 335, 365, 436, 503 |
| AjnI | CCWGG | 1 cut(s) | 493 |
| AluBI | AGCT | 4 cut(s) | 206, 276, 283, 529 |
| AluI | AGCT | 4 cut(s) | 206, 276, 283, 529 |
| AlwI | GGATC | 2 cut(s) | 44, 57 |
| Ama87I | CYCGRG | 1 cut(s) | 198 |
| AoxI | GGCC | 5 cut(s) | 25, 81, 224, 375, 472 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 95 |
| AspLEI | GCGC | 1 cut(s) | 409 |
| AspS9I | GGNCC | 2 cut(s) | 25, 224 |
| AvaI | CYCGRG | 1 cut(s) | 198 |
| BalI | TGGCCA | 1 cut(s) | 377 |
| BamHI | GGATCC | 1 cut(s) | 49 |
| BccI | CCATC | 4 cut(s) | 73, 79, 317, 386 |
| BceAI | ACGGC | 1 cut(s) | 12 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 49, 83 |
| BciT130I | CCWGG | 1 cut(s) | 495 |
| BfaI | CTAG | 1 cut(s) | 416 |
| BfmI | CTRYAG | 1 cut(s) | 399 |
| BisI | GCNGC | 3 cut(s) | 84, 195, 472 |
| BlsI | GCNGC | 3 cut(s) | 85, 196, 473 |
| Bme1390I | CCNGG | 1 cut(s) | 495 |
| BmeT110I | CYCGRG | 1 cut(s) | 198 |
| BmgT120I | GGNCC | 2 cut(s) | 25, 224 |
| BmiI | GGNNCC | 1 cut(s) | 51 |
| BmrFI | CCNGG | 1 cut(s) | 495 |
| BmsI | GCATC | 2 cut(s) | 22, 111 |
| BsaJI | CCNNGG | 1 cut(s) | 494 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 22, 112, 314 |
| BseBI | CCWGG | 1 cut(s) | 495 |
| BseDI | CCNNGG | 1 cut(s) | 494 |
| BseGI | GGATG | 1 cut(s) | 102 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 22, 112, 314 |
| BshFI | GGCC | 5 cut(s) | 27, 83, 226, 377, 474 |
| BsiHKCI | CYCGRG | 1 cut(s) | 198 |
| BslFI | GGGAC | 1 cut(s) | 141 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 22, 112, 314 |
| BsmFI | GGGAC | 1 cut(s) | 141 |
| BsmI | GAATGC | 1 cut(s) | 61 |
| BsnI | GGCC | 5 cut(s) | 27, 83, 226, 377, 474 |
| BsoBI | CYCGRG | 1 cut(s) | 198 |
| Bsp143I | GATC | 1 cut(s) | 49 |
| BspACI | CCGC | 3 cut(s) | 84, 194, 471 |
| BspANI | GGCC | 5 cut(s) | 27, 83, 226, 377, 474 |
| BspLI | GGNNCC | 1 cut(s) | 51 |
| BspPI | GGATC | 2 cut(s) | 44, 57 |
| BssECI | CCNNGG | 1 cut(s) | 494 |
| BssMI | GATC | 1 cut(s) | 49 |
| Bst2UI | CCWGG | 1 cut(s) | 495 |
| Bst4CI | ACNGT | 2 cut(s) | 361, 431 |
| BstC8I | GCNNGC | 2 cut(s) | 285, 329 |
| BstF5I | GGATG | 1 cut(s) | 102 |
| BstHHI | GCGC | 1 cut(s) | 409 |
| BstKTI | GATC | 1 cut(s) | 52 |
| BstMBI | GATC | 1 cut(s) | 49 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 203 |
| BstNI | CCWGG | 1 cut(s) | 495 |
| BstNSI | RCATGY | 1 cut(s) | 331 |
| BstSCI | CCNGG | 1 cut(s) | 493 |
| BstSFI | CTRYAG | 1 cut(s) | 399 |
| BstX2I | RGATCY | 1 cut(s) | 49 |
| BstYI | RGATCY | 1 cut(s) | 49 |
| BsuRI | GGCC | 5 cut(s) | 27, 83, 226, 377, 474 |
| BtsCI | GGATG | 1 cut(s) | 102 |
| BtsIMutI | CAGTG | 1 cut(s) | 427 |
| Cac8I | GCNNGC | 2 cut(s) | 285, 329 |
| CfoI | GCGC | 1 cut(s) | 409 |
| Cfr13I | GGNCC | 2 cut(s) | 25, 224 |
| Csp6I | GTAC | 1 cut(s) | 479 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 27, 62 |
| CviAII | CATG | 4 cut(s) | 8, 328, 382, 487 |
| CviQI | GTAC | 1 cut(s) | 479 |
| DpnI | GATC | 1 cut(s) | 51 |
| DpnII | GATC | 1 cut(s) | 49 |
| EaeI | YGGCCR | 3 cut(s) | 81, 375, 472 |
| Eco88I | CYCGRG | 1 cut(s) | 198 |
| EcoRII | CCWGG | 1 cut(s) | 493 |
| FaeI | CATG | 4 cut(s) | 11, 331, 385, 490 |
| FaiI | YATR | 4 cut(s) | 9, 329, 383, 488 |
| FaqI | GGGAC | 1 cut(s) | 141 |
| FatI | CATG | 4 cut(s) | 7, 327, 381, 486 |
| Fnu4HI | GCNGC | 3 cut(s) | 84, 195, 472 |
| FokI | GGATG | 1 cut(s) | 89 |
| Fsp4HI | GCNGC | 3 cut(s) | 84, 195, 472 |
| FspAI | RTGCGCAY | 1 cut(s) | 408 |
| FspBI | CTAG | 1 cut(s) | 416 |
| FspI | TGCGCA | 1 cut(s) | 408 |
| GlaI | GCGC | 1 cut(s) | 408 |
| GluI | GCNGC | 3 cut(s) | 84, 195, 472 |
| HaeIII | GGCC | 5 cut(s) | 27, 83, 226, 377, 474 |
| HhaI | GCGC | 1 cut(s) | 409 |
| Hin1II | CATG | 4 cut(s) | 11, 331, 385, 490 |
| Hin6I | GCGC | 1 cut(s) | 407 |
| HinP1I | GCGC | 1 cut(s) | 407 |
| HindIII | AAGCTT | 2 cut(s) | 281, 527 |
| HinfI | GANTC | 6 cut(s) | 116, 257, 290, 368, 420, 490 |
| Hpy188I | TCNGA | 3 cut(s) | 54, 76, 107 |
| Hpy188III | TCNNGA | 2 cut(s) | 200, 219 |
| HpyAV | CCTTC | 3 cut(s) | 243, 312, 461 |
| HpyCH4III | ACNGT | 2 cut(s) | 361, 431 |
| HpyCH4IV | ACGT | 1 cut(s) | 438 |
| HpyCH4V | TGCA | 3 cut(s) | 242, 287, 344 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 203 |
| HpySE526I | ACGT | 1 cut(s) | 438 |
| Hsp92II | CATG | 4 cut(s) | 11, 331, 385, 490 |
| HspAI | GCGC | 1 cut(s) | 407 |
| Kzo9I | GATC | 1 cut(s) | 49 |
| LmnI | GCTCC | 1 cut(s) | 274 |
| LpnPI | CCDG | 7 cut(s) | 8, 72, 149, 204, 276, 480, 507 |
| LweI | GCATC | 2 cut(s) | 22, 111 |
| MaeI | CTAG | 1 cut(s) | 416 |
| MaeII | ACGT | 1 cut(s) | 438 |
| MaeIII | GTNAC | 1 cut(s) | 421 |
| MalI | GATC | 1 cut(s) | 51 |
| MboI | GATC | 1 cut(s) | 49 |
| MboII | GAAGA | 1 cut(s) | 377 |
| MflI | RGATCY | 1 cut(s) | 49 |
| MlsI | TGGCCA | 1 cut(s) | 377 |
| MluCI | AATT | 3 cut(s) | 39, 146, 335 |
| MluNI | TGGCCA | 1 cut(s) | 377 |
| MlyI | GAGTC | 3 cut(s) | 125, 429, 484 |
| MnlI | CCTC | 2 cut(s) | 105, 215 |
| Mox20I | TGGCCA | 1 cut(s) | 377 |
| MroXI | GAANNNNTTC | 1 cut(s) | 95 |
| MscI | TGGCCA | 1 cut(s) | 377 |
| MseI | TTAA | 3 cut(s) | 132, 512, 538 |
| MslI | CAYNNNNRTG | 1 cut(s) | 185 |
| Msp20I | TGGCCA | 1 cut(s) | 377 |
| MspR9I | CCNGG | 1 cut(s) | 495 |
| Mva1269I | GAATGC | 1 cut(s) | 61 |
| MvaI | CCWGG | 1 cut(s) | 495 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 203 |
| NdeII | GATC | 1 cut(s) | 49 |
| NlaIII | CATG | 4 cut(s) | 11, 331, 385, 490 |
| NlaIV | GGNNCC | 1 cut(s) | 51 |
| NmuCI | GTSAC | 1 cut(s) | 421 |
| NsbI | TGCGCA | 1 cut(s) | 408 |
| NspI | RCATGY | 1 cut(s) | 331 |
| PaeI | GCATGC | 1 cut(s) | 331 |
| PaeR7I | CTCGAG | 1 cut(s) | 198 |
| PctI | GAATGC | 1 cut(s) | 61 |
| PdmI | GAANNNNTTC | 1 cut(s) | 95 |
| PfeI | GAWTC | 3 cut(s) | 257, 290, 368 |
| PkrI | GCNGC | 3 cut(s) | 85, 196, 473 |
| PleI | GAGTC | 3 cut(s) | 124, 428, 484 |
| PpsI | GAGTC | 3 cut(s) | 124, 428, 484 |
| Psp6I | CCWGG | 1 cut(s) | 493 |
| PspGI | CCWGG | 1 cut(s) | 493 |
| PspN4I | GGNNCC | 1 cut(s) | 51 |
| PspPI | GGNCC | 2 cut(s) | 25, 224 |
| PsuI | RGATCY | 1 cut(s) | 49 |
| RsaI | GTAC | 1 cut(s) | 480 |
| RsaNI | GTAC | 1 cut(s) | 479 |
| RseI | CAYNNNNRTG | 1 cut(s) | 185 |
| SaqAI | TTAA | 3 cut(s) | 132, 512, 538 |
| SatI | GCNGC | 3 cut(s) | 84, 195, 472 |
| Sau3AI | GATC | 1 cut(s) | 49 |
| Sau96I | GGNCC | 2 cut(s) | 25, 224 |
| SchI | GAGTC | 3 cut(s) | 125, 429, 484 |
| ScrFI | CCNGG | 1 cut(s) | 495 |
| SetI | ASST | 8 cut(s) | 168, 208, 240, 278, 285, 406, 441, 531 |
| SfaNI | GCATC | 2 cut(s) | 22, 111 |
| SfcI | CTRYAG | 1 cut(s) | 399 |
| Sfr274I | CTCGAG | 1 cut(s) | 198 |
| SlaI | CTCGAG | 1 cut(s) | 198 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 185 |
| SmlI | CTYRAG | 1 cut(s) | 198 |
| SmoI | CTYRAG | 1 cut(s) | 198 |
| SphI | GCATGC | 1 cut(s) | 331 |
| Sse9I | AATT | 3 cut(s) | 39, 146, 335 |
| SsiI | CCGC | 3 cut(s) | 84, 194, 471 |
| SspMI | CTAG | 1 cut(s) | 416 |
| StyD4I | CCNGG | 1 cut(s) | 493 |
| TaaI | ACNGT | 2 cut(s) | 361, 431 |
| TaiI | ACGT | 1 cut(s) | 441 |
| TaqI | TCGA | 2 cut(s) | 119, 199 |
| TasI | AATT | 3 cut(s) | 39, 146, 335 |
| TatI | WGTACW | 1 cut(s) | 478 |
| TauI | GCSGC | 3 cut(s) | 86, 197, 474 |
| TfiI | GAWTC | 3 cut(s) | 257, 290, 368 |
| Tru1I | TTAA | 3 cut(s) | 132, 512, 538 |
| Tru9I | TTAA | 3 cut(s) | 132, 512, 538 |
| TscAI | CASTG | 1 cut(s) | 434 |
| TseFI | GTSAC | 1 cut(s) | 421 |
| Tsp45I | GTSAC | 1 cut(s) | 421 |
| TspRI | CASTG | 1 cut(s) | 434 |
| XceI | RCATGY | 1 cut(s) | 331 |
| XhoI | CTCGAG | 1 cut(s) | 198 |
| XmnI | GAANNNNTTC | 1 cut(s) | 95 |
| XspI | CTAG | 1 cut(s) | 416 |