pycom16g16090

Protein TIME FOR

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
11994281 .. 11999107
4827 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3810 bp
ATGTCCGCCGCCGCACCCAAGAGGAAAAGACCACGACCCGTGAAGTATGAAGACGAGAACCCAGCAATTTTTGCAGTTCAAAACAGTCCCATTTCGTCTACGGCCAAAATGGTGGCCGATCAGCCTTCAAAGGTTGAGACTTCCTCTCCAAAATTGGAGAAAAACCCAGGATCTGCAGCTGAAAACGGTGGCTTTGCGTACGATTTGCCCAACTCGCAAGCTGTTCCAGCTGCTCCGGCATCAATGGAGGCTCAGCCGGAGGCAATTAAGCCGGAGAGCAACGTCGTGTCAAATTCAAGGCCAGCGAGCGACGAATCGGAGAGTAGAAATGTTAGAACGAACAAAGTGGAACTTCAATCTCCCAAGAAGGAATCCACTGGCCTCAGATTGGATGATAAACGTGAAGAAATCACCCTGACCAAACCGAGTTCAACAATCCCAGAAGTTGAAAACCACAGAGAAGAAAAGTTCCAGATAGACCTGATGGCTCCTCCAGAAAGGGATGGTGAAGTTGATTTTATCTCCGTAGATCCTAAGCCTGCGGTCGTAGATGCAGAAACGGACTTAAAAGCTGTGAGCAGAGAGGATGACAGCAAAGCTCTGAAAATTGGCAACAAGGAAGAAGTACAGCCTTTAAATTTGGAAACTGAGAAGTCAAAAGCAGCTTTGGAAGAAGCAGAAGCAGGTGATTTGAAAAGGCAGACTTCTTCCTTTGTTGGTGGGAAAGAAAGGAATTTTGATCTGCAGCTTGATTTGGAGAAGACTGAGAGTTTTAGTGGAAACAAGCTGCCCCATAATGTTGCAAAGCAGAACACTGAGAAAACTGTGCAATCGGGTTCTGTACCTTTGCCGATGTCCGTGGCGGGCTGGCCGAGCGGGCTTCCTCCTATGGGGTACGCTCTTCGCAGATATATGGCGCCCTTACCAGGAGTTGTATCCATGGACGGGAGCACCGTTTCTTCAGCTCCGATACAACCGCCGCATTTGCTTTTTAGTCAACCTCGGCCAAAGAGGTGCACAACCCATTGCTACATTGCAAGGAATATATACTGTCACCAGCAAATCTCGAGGATGAATCCTTTCTGGCCGGTAGCAGCTGGTTCGGGATCTCTGTATGGAGGAGCCAAGCATAGCAATCCCAATGTATTACCTCCAGAATTGCTTGGCAATGTTCCAGGAAGAGGGGTGAATCCTGCACAGGACAAGGGGCAGGGGATTGCTATGTTTCCTGCTCAATCTGCGAAGGAAAAAACTTCACAAGCAGCAAACCTTGTGGATGCGCAGAGAAAGCAAATCGTGCTCCAGCAAGCTCTGCCTCCCGGGCCACCTACTAATATATTGCATGGTCCTGCTTTCATTTTCCCATTGAGCCAGCAACAGGCCGCTCCCGCTCCTTCTGTCCGACCTGGTTCTGTGAAGTCTTCTAATGCTGGTGGTGCAGCTTCATCCAGTGCATCTAACTCTGCTTCATTGAGTGCGTCAGCTGCAACCGCTGCTGCAGCACCAGCATTGAGTTTCAACTACCCAAATATGGCTGGAAATGAACCCCAGTATTTGGCGATTTTGCAGAACAATGCATATCCATTTCCAATGCCACCTCATGTAGGTGCACAGCCGGCATACAGAGGACCCCATGCTCAGGCGATGCCTTATTTTAACGGGTCTTTCTATCCTTCTCAAATGCTCCATCCTTCTCAACTACAACAGCAGCAGCAGCAACCCCCACCGCCTTCTCAATCACAGCAAAGTCAACAAGGTCATCCAAACACTACTATTTCAAGTGGTTCTTCGTCGTCCCAGAAGCATTTGCAAAATCAGCAGCAAAGGCCACATCAAAGTGTTGTCAATGGTGGCAGTGGAAGCTTGCAAGGCTTTCCTGCCTCAAAAAACCATCCTTCGCAAGCAATACAGCTGCAGCAGCAGCAGAACCTGCATGTTTCGCGCCAACTTGAGCCTGAAATGGGTGGCGAAGACAGCCCGTCAACTGCCGATAGTCGTGTCTCTCGTGCAAACATGAGTATTTATGGTCAGAATTTTGCAATGCCAATGCATCCGCCAAACTTTGCTTTGATGACACATCCTTCAGTTGGAAGTGCCAGTGGTGCAACAGGTGCTAGTGGTAGTGAAAAGAAGCAGCAGCAACAGCAACAGGGCTCAAAGGCTGGGGTTGAAGCATCCCAAGCTTTCGCCATGTCTTTTGCTTCCTTAAATGGTGCCACCGTTTCTCCTGGAATTGACATAACATCGATGAATCATACAATTCTCCAGAACTTTCCAGATGTTACTAGGCACAGCTATCATCAGTATATGGCTGTTGCTGCGGCTGCCCAAGCTGCACAACAGAAAAAGAATTATCGAGGTGCGGAAGAAGGGAAAACCGGAGGAGGGGATTCCTCTAATGTGGAAGAGGAAAGAAAGGCCATGGCTGGGAAAGCTTCATCAAATGTTGGGCACTCTATTGCTTTCTCCAGGGCAGATTTGACCGACACATCTGGTTCTACAATACCAGGCAACAATGTGATTGATAGTTCAGCAAGAGCAGTTAACCTCAGCTCCACTCCTGTCCGATCATCCAGTTCTTCTATGCCAGCTGCTGTCAGCCCTGCAAATGCACCCATACCCCAGCAACAAATGCAGCAACAGATGCGGAATCACCAGCAACAGCAGCCGCAGCAGATGTATCAGCTTCAGAAGCAGCAGTTTTCTTCTGTGGCTCCAGCTCGTAACAAAACACCAACAACGAGTAATGGCAGTGTGTACTCTGATCACCTCCCTTCAACCTCTTCTATGGCTGCAAAGTTTCCTAATGCTCTATCATCATTCCCCCAAAACCTTGTCCAAAGCAGCACCAGTCCAGCTCAATCTCCTCAGTGGAAGAATTCTGCAAGGATAACCACTTCCCAAGTTCCTTCATCTTCTCTTGCGTCGTCAACCTCTTCGTCCCTCAAAAACCTCCCTCAAAAGCATGGGCGGACACAGCAAAGCCACACACAGATTTCTTTTGCTGCAAACACCAAGGCTTCAACCCAATCTCAAGGTTTGCAGCCTGCCAGTAGCAATCAGTCTCCATCTCCTCCTGTAATGGTTGGTTCGCCCACAACCACAACATCATCAATGTCTAGAAGTGCTGGTGGAAGCCCCAGGACAACTACTTCGACTTCCACAGGAAATAAAGCTGGCCAAATATCTTCTTTTTCATCTCAGCAGGCCAAGAACTCACCATCAGTGCCCAGTCAGAAGTCGTCTCCTGTTGGCGGGAGGAATGTCCCTTCGATCCTAGGCAACACCCATATTACCTCTTCGGGCGCTGGTACTAAGCCACAATTGCAGCAACAGCATCAGCAACATCAGCAACAACAGTTATATAAGCAATCGATTCAACAAGTGCAGTTCTTCTCTAATGCCTACATGCAGCCTCAAGCTTCACATTCCAATAGTAACACTTCTACTCAATCTCCTTCAAGCGGGTATTATCATGCTTCTAAGCGCCGACCTGAGCAACAGCAGCAGTCACAAGGCTCATCAGGAACTTCTTCGAGCGGGATGTTGTCACTCTGCCCTCCTGTTACGCATTCAAATACCAGCACCAACGATCCTGCAAAGGCGGCTGCTGCTGCTAACATGAGAGGCGGTAACTTATCCTCGCAGACTCTTATGCATGCTCAGTTTACTGCTGCACCGGCATCTGGGCCACACCAACTTGTACCAGCAGTTGTACCTGCAGGATTCTCTTACGTACAACATGCTGCTGTTCCGACTGTGGCCCAGGTAAAACCGGCAGAACAGAAGAAACAACCTGCCGGTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1270

Amino Acids

134.32

Weight (kDa)

9.51

Isoelectric Point (pI)

72.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 674
Acc16I TGCGCA 1 cut(s) 1281
Acc36I ACCTGC 4 cut(s) 674, 1938, 3727, 3805
AccB1I GGYRCC 2 cut(s) 916, 2213
AccB7I CCANNNNNTGG 1 cut(s) 1555
AccBSI CCGCTC 4 cut(s) 876, 1385, 1391, 3540
AccI GTMKAC 1 cut(s) 98
AccII CGCG 1 cut(s) 1942
AclWI GGATC 5 cut(s) 178, 524, 1114, 3268, 3587
AcoI YGGCCR 6 cut(s) 102, 114, 869, 1004, 1085, 3178
AcsI RAATTY 5 cut(s) 292, 637, 733, 2032, 2878
AcuI CTGAAG 3 cut(s) 945, 2067, 2672
AcyI GRCGYC 1 cut(s) 917
AfaI GTAC 9 cut(s) 200, 627, 843, 896, 2759, 3313, 3705, 3717, 3738
AhdI GACNNNNNGTC 1 cut(s) 1978
AjnI CCWGG 9 cut(s) 166, 925, 1174, 1405, 2227, 2468, 2506, 3140, 3765
Alw21I GWGCWC 4 cut(s) 953, 1019, 1302, 1612
Alw26I GTCTC 4 cut(s) 131, 2005, 3069, 3249
Alw44I GTGCAC 2 cut(s) 1015, 1608
AlwI GGATC 5 cut(s) 178, 524, 1114, 3268, 3587
AlwNI CAGNNNCTG 3 cut(s) 173, 1930, 2594
Ama87I CYCGRG 2 cut(s) 1066, 1319
ApaLI GTGCAC 2 cut(s) 1015, 1608
ApoI RAATTY 5 cut(s) 292, 637, 733, 2032, 2878
ArsI GACNNNNNNTTYG 2 cut(s) 3136, 3168
Asp700I GAANNNNTTC 2 cut(s) 1079, 3532
AspA2I CCTAGG 1 cut(s) 3277
AspLEI GCGC 5 cut(s) 919, 1282, 1944, 3308, 3489
AspS9I GGNCC 5 cut(s) 1322, 1346, 1628, 3689, 3763
AsuC2I CCSGG 2 cut(s) 1320, 1321
AsuHPI GGTGA 8 cut(s) 403, 518, 698, 1046, 1198, 2645, 2759, 3210
AvaI CYCGRG 2 cut(s) 1066, 1319
AvaII GGWCC 2 cut(s) 1346, 1628
AvrII CCTAGG 1 cut(s) 3277
BaeGI GKGCMC 4 cut(s) 1019, 1612, 2454, 3231
BalI TGGCCA 1 cut(s) 3180
BanI GGYRCC 2 cut(s) 916, 2213
BanII GRGCYC 1 cut(s) 2156
BauI CACGAG 1 cut(s) 2004
BbsI GAAGAC 4 cut(s) 57, 767, 1413, 1977
Bbv12I GWGCWC 4 cut(s) 953, 1019, 1302, 1612
BbvCI CCTCAGC 1 cut(s) 2549
BccI CCATC 6 cut(s) 478, 497, 1695, 1899, 3076, 3229
BceAI ACGGC 1 cut(s) 117
BcgI CGANNNNNNTGC 2 cut(s) 1083, 1117
BciT130I CCWGG 9 cut(s) 168, 927, 1176, 1407, 2229, 2470, 2508, 3142, 3767
BciVI GTATCC 1 cut(s) 946
BclI TGATCA 1 cut(s) 2764
BcnI CCSGG 2 cut(s) 1320, 1321
BcoDI GTCTC 4 cut(s) 131, 2005, 3069, 3249
BfaI CTAG 4 cut(s) 2115, 2286, 3120, 3278
BfmI CTRYAG 5 cut(s) 174, 743, 1497, 1913, 3720
BfoI RGCGCY 3 cut(s) 920, 3309, 3490
BfuAI ACCTGC 4 cut(s) 674, 1938, 3727, 3805
BfuI GTATCC 1 cut(s) 946
BglI GCCNNNNNGGC 2 cut(s) 877, 1321
BlnI CCTAGG 1 cut(s) 3277
BlpI GCTNAGC 1 cut(s) 252
Bme18I GGWCC 2 cut(s) 1346, 1628
BmeRI GACNNNNNGTC 1 cut(s) 1978
BmeT110I CYCGRG 2 cut(s) 1066, 1319
BmgT120I GGNCC 5 cut(s) 1322, 1346, 1628, 3689, 3763
BmiI GGNNCC 6 cut(s) 489, 918, 1123, 1630, 2215, 2715
BmrI ACTGGG 2 cut(s) 1543, 3225
BmuI ACTGGG 2 cut(s) 1543, 3225
BpiI GAAGAC 4 cut(s) 57, 767, 1413, 1977
BplI GAGNNNNNCTC 2 cut(s) 128, 160
BpmI CTGGAG 6 cut(s) 477, 1137, 1286, 2249, 2452, 2700
Bpu10I CCTNAGC 4 cut(s) 534, 1638, 2549, 3495
Bpu1102I GCTNAGC 1 cut(s) 252
BpuEI CTTGAG 3 cut(s) 1970, 3018, 3402
BpuMI CCSGG 2 cut(s) 1320, 1321
Bsa29I ATCGAT 2 cut(s) 2246, 3374
BsaAI YACGTR 1 cut(s) 3736
BsaHI GRCGYC 1 cut(s) 917
BsaWI WCCGGW 1 cut(s) 2378
BsaXI ACNNNNNCTCC 8 cut(s) 130, 160, 2209, 2239, 2537, 2567, 3439, 3469
Bse118I RCCGGY 5 cut(s) 1087, 1615, 3679, 3775, 3800
Bse1I ACTGG 8 cut(s) 382, 1449, 1549, 2097, 2574, 2850, 3051, 3231
Bse3DI GCAATG 4 cut(s) 1024, 1032, 1174, 2046
BseBI CCWGG 9 cut(s) 168, 927, 1176, 1407, 2229, 2470, 2508, 3142, 3767
BseCI ATCGAT 2 cut(s) 2246, 3374
BseMI GCAATG 4 cut(s) 1024, 1032, 1174, 2046
BseNI ACTGG 8 cut(s) 382, 1449, 1549, 2097, 2574, 2850, 3051, 3231
BseRI GAGGAG 5 cut(s) 480, 1134, 2397, 2856, 3063
BseSI GKGCMC 4 cut(s) 1019, 1612, 2454, 3231
BseYI CCCAGC 4 cut(s) 61, 2162, 2426, 2622
BsgI GTGCAG 5 cut(s) 1179, 1458, 2319, 3407, 3660
Bsh1236I CGCG 1 cut(s) 1942
Bsh1285I CGRYCG 1 cut(s) 546
BshNI GGYRCC 2 cut(s) 916, 2213
BshVI ATCGAT 2 cut(s) 2246, 3374
BsiEI CGRYCG 1 cut(s) 546
BsiHKAI GWGCWC 4 cut(s) 953, 1019, 1302, 1612
BsiHKCI CYCGRG 2 cut(s) 1066, 1319
BsiWI CGTACG 1 cut(s) 198
BslFI GGGAC 4 cut(s) 72, 1780, 2926, 3251
BsmAI GTCTC 4 cut(s) 131, 2005, 3069, 3249
BsmBI CGTCTC 1 cut(s) 3249
BsmFI GGGAC 4 cut(s) 72, 1780, 2926, 3251
BsmI GAATGC 1 cut(s) 3571
BsoBI CYCGRG 2 cut(s) 1066, 1319
Bsp1286I GDGCHC 7 cut(s) 953, 1019, 1302, 1612, 2156, 2454, 3231
Bsp143I GATC 9 cut(s) 118, 170, 529, 739, 1106, 2567, 2764, 3273, 3592
Bsp1720I GCTNAGC 1 cut(s) 252
Bsp19I CCATGG 2 cut(s) 939, 2421
BspDI ATCGAT 2 cut(s) 2246, 3374
BspFNI CGCG 1 cut(s) 1942
BspLI GGNNCC 6 cut(s) 489, 918, 1123, 1630, 2215, 2715
BspMAI CTGCAG 5 cut(s) 178, 747, 1501, 1917, 3724
BspMI ACCTGC 4 cut(s) 674, 1938, 3727, 3805
BspPI GGATC 5 cut(s) 178, 524, 1114, 3268, 3587
BspQI GCTCTTC 1 cut(s) 906
BspT107I GGYRCC 2 cut(s) 916, 2213
BsrBI CCGCTC 4 cut(s) 876, 1385, 1391, 3540
BsrDI GCAATG 4 cut(s) 1024, 1032, 1174, 2046
BsrFI RCCGGY 5 cut(s) 1087, 1615, 3679, 3775, 3800
BsrI ACTGG 8 cut(s) 382, 1449, 1549, 2097, 2574, 2850, 3051, 3231
BssAI RCCGGY 5 cut(s) 1087, 1615, 3679, 3775, 3800
BssMI GATC 9 cut(s) 118, 170, 529, 739, 1106, 2567, 2764, 3273, 3592
BssNI GRCGYC 1 cut(s) 917
BssSI CACGAG 1 cut(s) 2004
BssT1I CCWWGG 4 cut(s) 939, 2421, 3015, 3277
Bst2BI CACGAG 1 cut(s) 2004
Bst2UI CCWGG 9 cut(s) 168, 927, 1176, 1407, 2229, 2470, 2508, 3142, 3767
Bst4CI ACNGT 8 cut(s) 86, 188, 826, 955, 1052, 2221, 3360, 3760
Bst6I CTCTTC 6 cut(s) 906, 1174, 2400, 2788, 2941, 3304
BstACI GRCGYC 1 cut(s) 917
BstAPI GCANNNNNTGC 8 cut(s) 71, 1297, 1312, 1493, 1930, 2111, 2632, 2644
BstBAI YACGTR 1 cut(s) 3736
BstDSI CCRYGG 3 cut(s) 858, 939, 2421
BstENI CCTNNNNNAGG 1 cut(s) 1602
BstFNI CGCG 1 cut(s) 1942
BstH2I RGCGCY 3 cut(s) 920, 3309, 3490
BstHHI GCGC 5 cut(s) 919, 1282, 1944, 3308, 3489
BstKTI GATC 9 cut(s) 121, 173, 532, 742, 1109, 2570, 2767, 3276, 3595
BstMAI GTCTC 4 cut(s) 131, 2005, 3069, 3249
BstMBI GATC 9 cut(s) 118, 170, 529, 739, 1106, 2567, 2764, 3273, 3592
BstMCI CGRYCG 1 cut(s) 546
BstNI CCWGG 9 cut(s) 168, 927, 1176, 1407, 2229, 2470, 2508, 3142, 3767
BstNSI RCATGY 4 cut(s) 1937, 3412, 3662, 3746
BstSFI CTRYAG 5 cut(s) 174, 743, 1497, 1913, 3720
BstSLI GKGCMC 4 cut(s) 1019, 1612, 2454, 3231
BstSNI TACGTA 1 cut(s) 3736
BstUI CGCG 1 cut(s) 1942
BstV2I GAAGAC 4 cut(s) 57, 767, 1413, 1977
BstX2I RGATCY 3 cut(s) 170, 529, 1106
BstXI CCANNNNNNTGG 1 cut(s) 112
BstYI RGATCY 3 cut(s) 170, 529, 1106
Bsu15I ATCGAT 2 cut(s) 2246, 3374
BsuI GTATCC 1 cut(s) 946
BsuTUI ATCGAT 2 cut(s) 2246, 3374
BtgI CCRYGG 3 cut(s) 858, 939, 2421
BtgZI GCGATG 1 cut(s) 1658
BtsI GCAGTG 2 cut(s) 1861, 2758
BtsIMutI CAGTG 8 cut(s) 375, 813, 1456, 1861, 2104, 2758, 2876, 3231
BveI ACCTGC 4 cut(s) 674, 1938, 3727, 3805
CaiI CAGNNNCTG 3 cut(s) 173, 1930, 2594
CfoI GCGC 5 cut(s) 919, 1282, 1944, 3308, 3489
Cfr10I RCCGGY 5 cut(s) 1087, 1615, 3679, 3775, 3800
Cfr13I GGNCC 5 cut(s) 1322, 1346, 1628, 3689, 3763
Cfr9I CCCGGG 1 cut(s) 1319
ClaI ATCGAT 2 cut(s) 2246, 3374
CseI GACGC 2 cut(s) 1467, 2913
CsiI ACCWGGT 1 cut(s) 1405
Csp6I GTAC 9 cut(s) 199, 626, 842, 895, 2758, 3312, 3704, 3716, 3737
CspCI CAANNNNNGTGG 2 cut(s) 1254, 1289
CviQI GTAC 9 cut(s) 199, 626, 842, 895, 2758, 3312, 3704, 3716, 3737
DinI GGCGCC 1 cut(s) 918
DpnI GATC 9 cut(s) 120, 172, 531, 741, 1108, 2569, 2766, 3275, 3594
DpnII GATC 9 cut(s) 118, 170, 529, 739, 1106, 2567, 2764, 3273, 3592
DraI TTTAAA 1 cut(s) 636
DriI GACNNNNNGTC 1 cut(s) 1978
EaeI YGGCCR 6 cut(s) 102, 114, 869, 1004, 1085, 3178
Eam1104I CTCTTC 6 cut(s) 906, 1174, 2400, 2788, 2941, 3304
Eam1105I GACNNNNNGTC 1 cut(s) 1978
EarI CTCTTC 6 cut(s) 906, 1174, 2400, 2788, 2941, 3304
EciI GGCGGA 2 cut(s) 2043, 2986
Eco105I TACGTA 1 cut(s) 3736
Eco130I CCWWGG 4 cut(s) 939, 2421, 3015, 3277
Eco24I GRGCYC 1 cut(s) 2156
Eco47I GGWCC 2 cut(s) 1346, 1628
Eco57I CTGAAG 3 cut(s) 945, 2067, 2672
Eco88I CYCGRG 2 cut(s) 1066, 1319
EcoNI CCTNNNNNAGG 1 cut(s) 1602
EcoO109I RGGNCCY 1 cut(s) 1628
EcoRI GAATTC 1 cut(s) 2878
EcoRII CCWGG 9 cut(s) 166, 925, 1174, 1405, 2227, 2468, 2506, 3140, 3765
EcoT14I CCWWGG 4 cut(s) 939, 2421, 3015, 3277
EcoT22I ATGCAT 3 cut(s) 1579, 2052, 3660
EcoT38I GRGCYC 1 cut(s) 2156
EgeI GGCGCC 1 cut(s) 918
EheI GGCGCC 1 cut(s) 918
ErhI CCWWGG 4 cut(s) 939, 2421, 3015, 3277
Esp3I CGTCTC 1 cut(s) 3249
FalI AAGNNNNNCTT 6 cut(s) 336, 368, 688, 720, 1771, 1803
FaqI GGGAC 4 cut(s) 72, 1780, 2926, 3251
FauI CCCGC 6 cut(s) 856, 869, 1396, 3248, 3458, 3533
FbaI TGATCA 1 cut(s) 2764
FblI GTMKAC 1 cut(s) 98
FriOI GRGCYC 1 cut(s) 2156
FspBI CTAG 4 cut(s) 2115, 2286, 3120, 3278
FspI TGCGCA 1 cut(s) 1281
GlaI GCGC 5 cut(s) 918, 1281, 1943, 3307, 3488
GsaI CCCAGC 4 cut(s) 65, 2166, 2430, 2626
GsuI CTGGAG 6 cut(s) 477, 1137, 1286, 2249, 2452, 2700
HaeII RGCGCY 3 cut(s) 920, 3309, 3490
HgaI GACGC 2 cut(s) 1467, 2913
HhaI GCGC 5 cut(s) 919, 1282, 1944, 3308, 3489
Hin1I GRCGYC 1 cut(s) 917
Hin6I GCGC 5 cut(s) 917, 1280, 1942, 3306, 3487
HinP1I GCGC 5 cut(s) 917, 1280, 1942, 3306, 3487
HincII GTYRAC 5 cut(s) 998, 1751, 1983, 2545, 2931
HindII GTYRAC 5 cut(s) 998, 1751, 1983, 2545, 2931
HindIII AAGCTT 4 cut(s) 1861, 2181, 2433, 3420
HpaI GTTAAC 1 cut(s) 2545
HphI GGTGA 8 cut(s) 403, 518, 698, 1046, 1198, 2645, 2759, 3210
Hpy188III TCNNGA 9 cut(s) 472, 494, 1066, 1104, 1154, 2266, 2276, 3120, 3525
Hpy99I CGWCG 4 cut(s) 287, 314, 1795, 2929
HpyCH4III ACNGT 8 cut(s) 86, 188, 826, 955, 1052, 2221, 3360, 3760
HpyCH4IV ACGT 3 cut(s) 282, 400, 3735
HpySE526I ACGT 3 cut(s) 282, 400, 3735
Hsp92I GRCGYC 1 cut(s) 917
HspAI GCGC 5 cut(s) 917, 1280, 1942, 3306, 3487
KasI GGCGCC 1 cut(s) 916
KroI GCCGGC 1 cut(s) 1615
KroNI GCCGGC 1 cut(s) 1617
Ksp22I TGATCA 1 cut(s) 2764
KspAI GTTAAC 1 cut(s) 2545
Kzo9I GATC 9 cut(s) 118, 170, 529, 739, 1106, 2567, 2764, 3273, 3592
LguI GCTCTTC 1 cut(s) 906
MabI ACCWGGT 1 cut(s) 1405
MaeI CTAG 4 cut(s) 2115, 2286, 3120, 3278
MaeII ACGT 3 cut(s) 282, 400, 3735
MaeIII GTNAC 8 cut(s) 1052, 2281, 2723, 3437, 3510, 3549, 3565, 3632
MalI GATC 9 cut(s) 120, 172, 531, 741, 1108, 2569, 2766, 3275, 3594
MbiI CCGCTC 4 cut(s) 876, 1385, 1391, 3540
MboI GATC 9 cut(s) 118, 170, 529, 739, 1106, 2567, 2764, 3273, 3592
MfeI CAATTG 1 cut(s) 3323
MflI RGATCY 3 cut(s) 170, 529, 1106
MhlI GDGCHC 7 cut(s) 953, 1019, 1302, 1612, 2156, 2454, 3231
MlsI TGGCCA 1 cut(s) 3180
MluNI TGGCCA 1 cut(s) 3180
Mly113I GGCGCC 1 cut(s) 917
MlyI GAGTC 1 cut(s) 3643
MmeI TCCRAC 3 cut(s) 1426, 2068, 3779
Mox20I TGGCCA 1 cut(s) 3180
Mph1103I ATGCAT 3 cut(s) 1579, 2052, 3660
MroNI GCCGGC 1 cut(s) 1615
MroXI GAANNNNTTC 2 cut(s) 1079, 3532
MscI TGGCCA 1 cut(s) 3180
MseI TTAA 6 cut(s) 267, 566, 635, 1656, 2207, 2544
MslI CAYNNNNRTG 2 cut(s) 1605, 1836
Msp20I TGGCCA 1 cut(s) 3180
MspA1I CMGCKG 7 cut(s) 179, 230, 1097, 1484, 1493, 1912, 2591
MunI CAATTG 1 cut(s) 3323
Mva1269I GAATGC 1 cut(s) 3571
MvaI CCWGG 9 cut(s) 168, 927, 1176, 1407, 2229, 2470, 2508, 3142, 3767
MvnI CGCG 1 cut(s) 1942
NaeI GCCGGC 1 cut(s) 1617
NarI GGCGCC 1 cut(s) 917
NciI CCSGG 2 cut(s) 1320, 1321
NcoI CCATGG 2 cut(s) 939, 2421
NdeII GATC 9 cut(s) 118, 170, 529, 739, 1106, 2567, 2764, 3273, 3592
NgoMIV GCCGGC 1 cut(s) 1615
NlaIV GGNNCC 6 cut(s) 489, 918, 1123, 1630, 2215, 2715
NmeAIII GCCGAG 2 cut(s) 897, 982
NmuCI GTSAC 3 cut(s) 1052, 3510, 3549
NsbI TGCGCA 1 cut(s) 1281
NsiI ATGCAT 3 cut(s) 1579, 2052, 3660
NspI RCATGY 4 cut(s) 1937, 3412, 3662, 3746
PaeI GCATGC 1 cut(s) 3662
PaeR7I CTCGAG 1 cut(s) 1066
PaqCI CACCTGC 1 cut(s) 674
PciSI GCTCTTC 1 cut(s) 906
PcsI WCGNNNNNNNCGW 2 cut(s) 951, 2002
PctI GAATGC 1 cut(s) 3571
PdiI GCCGGC 1 cut(s) 1617
PdmI GAANNNNTTC 2 cut(s) 1079, 3532
PfeI GAWTC 9 cut(s) 314, 371, 1075, 1189, 2251, 2390, 2650, 3376, 3726
Pfl23II CGTACG 1 cut(s) 198
PflMI CCANNNNNTGG 1 cut(s) 1555
PfoI TCCNGGA 2 cut(s) 1174, 2227
PleI GAGTC 1 cut(s) 3643
PluTI GGCGCC 1 cut(s) 920
PpsI GAGTC 1 cut(s) 3643
Ppu21I YACGTR 1 cut(s) 3736
PpuMI RGGWCCY 1 cut(s) 1628
Psp5II RGGWCCY 1 cut(s) 1628
Psp6I CCWGG 9 cut(s) 166, 925, 1174, 1405, 2227, 2468, 2506, 3140, 3765
PspFI CCCAGC 4 cut(s) 61, 2162, 2426, 2622
PspGI CCWGG 9 cut(s) 166, 925, 1174, 1405, 2227, 2468, 2506, 3140, 3765
PspLI CGTACG 1 cut(s) 198
PspN4I GGNNCC 6 cut(s) 489, 918, 1123, 1630, 2215, 2715
PspPI GGNCC 5 cut(s) 1322, 1346, 1628, 3689, 3763
PspPPI RGGWCCY 1 cut(s) 1628
PstI CTGCAG 5 cut(s) 178, 747, 1501, 1917, 3724
PstNI CAGNNNCTG 3 cut(s) 173, 1930, 2594
PsuI RGATCY 3 cut(s) 170, 529, 1106
PvuII CAGCTG 6 cut(s) 179, 230, 1097, 1484, 1912, 2591
RsaI GTAC 9 cut(s) 200, 627, 843, 896, 2759, 3313, 3705, 3717, 3738
RsaNI GTAC 9 cut(s) 199, 626, 842, 895, 2758, 3312, 3704, 3716, 3737
RseI CAYNNNNRTG 2 cut(s) 1605, 1836
SapI GCTCTTC 1 cut(s) 906
SaqAI TTAA 6 cut(s) 267, 566, 635, 1656, 2207, 2544
Sau3AI GATC 9 cut(s) 118, 170, 529, 739, 1106, 2567, 2764, 3273, 3592
Sau96I GGNCC 5 cut(s) 1322, 1346, 1628, 3689, 3763
SbfI CCTGCAGG 1 cut(s) 3724
SchI GAGTC 1 cut(s) 3643
SdaI CCTGCAGG 1 cut(s) 3724
SduI GDGCHC 7 cut(s) 953, 1019, 1302, 1612, 2156, 2454, 3231
SexAI ACCWGGT 1 cut(s) 1405
SfcI CTRYAG 5 cut(s) 174, 743, 1497, 1913, 3720
SfoI GGCGCC 1 cut(s) 918
Sfr274I CTCGAG 1 cut(s) 1066
SinI GGWCC 2 cut(s) 1346, 1628
SlaI CTCGAG 1 cut(s) 1066
SmaI CCCGGG 1 cut(s) 1321
SmiMI CAYNNNNRTG 2 cut(s) 1605, 1836
SmlI CTYRAG 4 cut(s) 1066, 1949, 3033, 3417
SmoI CTYRAG 4 cut(s) 1066, 1949, 3033, 3417
SnaBI TACGTA 1 cut(s) 3736
SphI GCATGC 1 cut(s) 3662
Sse8387I CCTGCAGG 1 cut(s) 3724
SspDI GGCGCC 1 cut(s) 916
SspMI CTAG 4 cut(s) 2115, 2286, 3120, 3278
StyI CCWWGG 4 cut(s) 939, 2421, 3015, 3277
TaaI ACNGT 8 cut(s) 86, 188, 826, 955, 1052, 2221, 3360, 3760
TaiI ACGT 3 cut(s) 285, 403, 3738
TaqI TCGA 7 cut(s) 1067, 2246, 2356, 3155, 3272, 3374, 3536
TaqII GACCGA 1 cut(s) 2498
TatI WGTACW 2 cut(s) 625, 2757
TauI GCSGC 7 cut(s) 11, 14, 982, 1385, 2324, 2671, 3608
TfiI GAWTC 9 cut(s) 314, 371, 1075, 1189, 2251, 2390, 2650, 3376, 3726
Tru1I TTAA 6 cut(s) 267, 566, 635, 1656, 2207, 2544
Tru9I TTAA 6 cut(s) 267, 566, 635, 1656, 2207, 2544
TscAI CASTG 8 cut(s) 382, 820, 1456, 1861, 2104, 2758, 2876, 3231
TseFI GTSAC 3 cut(s) 1052, 3510, 3549
Tsp45I GTSAC 3 cut(s) 1052, 3510, 3549
TspGWI ACGGA 3 cut(s) 514, 575, 847
TspMI CCCGGG 1 cut(s) 1319
TspRI CASTG 8 cut(s) 382, 820, 1456, 1861, 2104, 2758, 2876, 3231
Van91I CCANNNNNTGG 1 cut(s) 1555
VneI GTGCAC 2 cut(s) 1015, 1608
VpaK11BI GGWCC 2 cut(s) 1346, 1628
XagI CCTNNNNNAGG 1 cut(s) 1602
XapI RAATTY 5 cut(s) 292, 637, 733, 2032, 2878
XbaI TCTAGA 1 cut(s) 3119
XceI RCATGY 4 cut(s) 1937, 3412, 3662, 3746
XhoI CTCGAG 1 cut(s) 1066
XmaI CCCGGG 1 cut(s) 1319
XmaJI CCTAGG 1 cut(s) 3277
XmiI GTMKAC 1 cut(s) 98
XmnI GAANNNNTTC 2 cut(s) 1079, 3532
XspI CTAG 4 cut(s) 2115, 2286, 3120, 3278
Zsp2I ATGCAT 3 cut(s) 1579, 2052, 3660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.