pycom16g17300

Acylamino-acid-releasing enzyme-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
13399494 .. 13403228
3735 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1416 bp
ATGAATGGAATAAGTCCGCGTTATAAAATCGTGGCGAGTCAGCTTGATTCGTCCCACTCCAAGATTCCCTCCTCCTCTTCCTATTTTATCTCACCTTCACACCTTCTCACTCCCAGGAGGAGCAGTCGCAGACCCTTTCGCTATTTTCTCTCTACTAAAAGATTGTCAACGCTTTTAGCCATGGGCAGTTCTAAAGATGGTCCAGTGAAGGAGATGCCTCTCGGGGTAGATGCAACAACTGAGGAAGAATATGCATCTCAGTCTAGGTTACTTCAAGACTTCACTAGTATTTCCAGCATTGACAAGGCATGGATTTTTAAGTCTGATAGCGGAATTGGGTCTCAGGCAATGTTTTCAATTAGTCAACTGAATCTTTTGGCAAACAAGAGGAAGAAATTCATTCTATCCTCTCATATTTCAAGAGAAAGTAACAATTCTGTAAACTTCCAATGGTCCCCGTTCCCGGTTGAGATGACAGGAGTATCTGTATTTGTTCCATCCCCGTCCGGTGCAAAGCTTTTTGTAGTTCGGAATCCTGAGAACGAATCTCCCTGCCAATTTGAAATTTGGGGCCGAGGTCAATTGGAGAAAGAATTCCACATTCCCCAATCTGTTCATGGTTCAGTTTATGCTGATGGATGGTTTCAGGGAATTTCTTGGAACGTTGATGAAACTCTCATTGCTTATGTTGCTGAGGAACCAGCTCCCTCCAAGCCCACATTTACAGGTCAGGGCTACAAGAAAGGTAGTTCCACGGATAAGGACTTTGGTAACTGGAAAGGTCAAGGGGATTGGAAGGAAGAATGGGGGGAAACCTATGCTGGAAAAAGGCAGCCTGCACTTTTTGTCATCAATATTAACAGTGGAGAGGCACAAGCTGTCAAAGGAATTGAAAAGTCTTTGAGTGTTGGTCAAGTTGTATGGGCGCCACCAGTTAAAGGCTCGCATCAACCTTTGGTTTTTGTTGGGTGGTCAGAAGGTATCAGAAAGCTTGGTATCAAGTTCTGCTTTAACAGGCCCTGTGCATTGTATGTGGTCAAGGCACCAAATTTTGAATCAGAAGCCAATGGATCTGAACTCAAAGCTAGTTCAACTGAAGATCTTCCTGCTGTAAAGCTGACTCAAAGCATAAGTAGTGCTTTCTATCCACGGTTCAGCCCAGATGGAAAATTCCTTTTGTTTTTATCGGCTAGAAGTTCTGTGGATTCTGGGGCACATTCTGCAACAGATTCTCTTCACAGAATAGACTGGCCAGTGGATGGAGTGCTATCCTCATCTGCAAAAATTGTTGATGTGATTCCTGTTGTTATGTGTGCTGAGGATGGTTGCTTCCCTGGGCTTTACTGGTCAAGTATCCTTAGTAATCCATGGCTTTCTGATGGATGCACAATCGATCATATCTTCTATCTGGGGTAG

Protein Analysis

472

Amino Acids

51.85

Weight (kDa)

7.62

Isoelectric Point (pI)

53.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
APEH_N PF19283 70 - 464 4.7e-216 Acylamino-acid-releasing enzyme, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 24
AccB1I GGYRCC 2 cut(s) 925, 1042
AccB7I CCANNNNNTGG 1 cut(s) 1259
AccII CGCG 1 cut(s) 19
AciI CCGC 2 cut(s) 17, 330
AclI AACGTT 1 cut(s) 663
AclWI GGATC 1 cut(s) 1078
AcoI YGGCCR 1 cut(s) 1250
AcsI RAATTY 6 cut(s) 395, 564, 593, 651, 1048, 1169
AcuI CTGAAG 1 cut(s) 1116
AcyI GRCGYC 1 cut(s) 926
AfiI CCNNNNNNNGG 3 cut(s) 463, 938, 1259
AgsI TTSAA 7 cut(s) 275, 357, 420, 563, 893, 1055, 1092
AhlI ACTAGT 1 cut(s) 284
AjnI CCWGG 2 cut(s) 113, 1333
AluBI AGCT 7 cut(s) 43, 517, 704, 878, 991, 1085, 1117
AluI AGCT 7 cut(s) 43, 517, 704, 878, 991, 1085, 1117
Alw26I GTCTC 1 cut(s) 345
AlwI GGATC 1 cut(s) 1078
AlwNI CAGNNNCTG 1 cut(s) 1020
Ama87I CYCGRG 1 cut(s) 221
AoxI GGCC 3 cut(s) 571, 1016, 1250
ApeKI GCWGC 1 cut(s) 832
ApoI RAATTY 6 cut(s) 395, 564, 593, 651, 1048, 1169
Asp700I GAANNNNTTC 3 cut(s) 395, 593, 1101
AspLEI GCGC 1 cut(s) 928
AspS9I GGNCC 4 cut(s) 200, 453, 571, 1017
AsuC2I CCSGG 1 cut(s) 464
AsuHPI GGTGA 1 cut(s) 84
AvaI CYCGRG 1 cut(s) 221
AvaII GGWCC 2 cut(s) 200, 453
BaeGI GKGCMC 1 cut(s) 1216
BaeI ACNNNNGTAYC 2 cut(s) 465, 498
BalI TGGCCA 1 cut(s) 1252
BanI GGYRCC 2 cut(s) 925, 1042
BbvCI CCTCAGC 2 cut(s) 693, 1317
BbvI GCAGC 1 cut(s) 844
BccI CCATC 8 cut(s) 191, 505, 629, 633, 1157, 1253, 1316, 1373
BciT130I CCWGG 2 cut(s) 115, 1335
BciVI GTATCC 1 cut(s) 1364
BcnI CCSGG 1 cut(s) 464
BcoDI GTCTC 1 cut(s) 345
BcuI ACTAGT 1 cut(s) 284
BfaI CTAG 4 cut(s) 264, 285, 1086, 1191
BfoI RGCGCY 1 cut(s) 929
BfuI GTATCC 1 cut(s) 1364
BglII AGATCT 1 cut(s) 1099
BisI GCNGC 1 cut(s) 833
BlsI GCNGC 1 cut(s) 834
Bme1390I CCNGG 3 cut(s) 115, 464, 1335
Bme18I GGWCC 2 cut(s) 200, 453
BmeT110I CYCGRG 1 cut(s) 221
BmgT120I GGNCC 4 cut(s) 200, 453, 571, 1017
BmiI GGNNCC 5 cut(s) 455, 572, 699, 927, 1044
BmrFI CCNGG 3 cut(s) 115, 464, 1335
BmsI GCATC 5 cut(s) 204, 220, 263, 955, 1373
Bpu10I CCTNAGC 2 cut(s) 693, 1317
BpuMI CCSGG 1 cut(s) 464
Bsa29I ATCGAT 1 cut(s) 1392
BsaHI GRCGYC 1 cut(s) 926
BsaI GGTCTC 1 cut(s) 345
BsaJI CCNNGG 8 cut(s) 113, 180, 574, 753, 1148, 1333, 1334, 1367
BsaWI WCCGGW 1 cut(s) 506
BsaXI ACNNNNNCTCC 4 cut(s) 109, 139, 471, 501
Bsc4I CCNNNNNNNGG 3 cut(s) 463, 938, 1259
Bse1I ACTGG 6 cut(s) 203, 779, 932, 1253, 1253, 1349
Bse3DI GCAATG 2 cut(s) 354, 678
BseBI CCWGG 2 cut(s) 115, 1335
BseCI ATCGAT 1 cut(s) 1392
BseDI CCNNGG 8 cut(s) 113, 180, 574, 753, 1148, 1333, 1334, 1367
BseGI GGATG 5 cut(s) 497, 644, 1264, 1327, 1388
BseLI CCNNNNNNNGG 3 cut(s) 463, 938, 1259
BseMI GCAATG 2 cut(s) 354, 678
BseMII CTCAG 6 cut(s) 231, 272, 356, 528, 684, 1308
BseNI ACTGG 6 cut(s) 203, 779, 932, 1253, 1253, 1349
BseRI GAGGAG 3 cut(s) 61, 64, 133
BseSI GKGCMC 1 cut(s) 1216
BseXI GCAGC 1 cut(s) 844
BsgI GTGCAG 1 cut(s) 822
Bsh1236I CGCG 1 cut(s) 19
BshFI GGCC 3 cut(s) 573, 1018, 1252
BshNI GGYRCC 2 cut(s) 925, 1042
BshVI ATCGAT 1 cut(s) 1392
BsiHKCI CYCGRG 1 cut(s) 221
BsiSI CCGG 2 cut(s) 464, 507
BslFI GGGAC 2 cut(s) 37, 439
BslI CCNNNNNNNGG 3 cut(s) 463, 938, 1259
BsmAI GTCTC 1 cut(s) 345
BsmFI GGGAC 2 cut(s) 37, 439
BsnI GGCC 3 cut(s) 573, 1018, 1252
Bso31I GGTCTC 1 cut(s) 345
BsoBI CYCGRG 1 cut(s) 221
Bsp1286I GDGCHC 1 cut(s) 1216
Bsp143I GATC 3 cut(s) 1070, 1099, 1393
Bsp19I CCATGG 2 cut(s) 180, 1367
BspACI CCGC 2 cut(s) 17, 330
BspANI GGCC 3 cut(s) 573, 1018, 1252
BspCNI CTCAG 6 cut(s) 232, 271, 355, 529, 685, 1309
BspDI ATCGAT 1 cut(s) 1392
BspFNI CGCG 1 cut(s) 19
BspLI GGNNCC 5 cut(s) 455, 572, 699, 927, 1044
BspPI GGATC 1 cut(s) 1078
BspT107I GGYRCC 2 cut(s) 925, 1042
BspTNI GGTCTC 1 cut(s) 345
BsrDI GCAATG 2 cut(s) 354, 678
BsrI ACTGG 6 cut(s) 203, 779, 932, 1253, 1253, 1349
BssECI CCNNGG 8 cut(s) 113, 180, 574, 753, 1148, 1333, 1334, 1367
BssMI GATC 3 cut(s) 1070, 1099, 1393
BssNI GRCGYC 1 cut(s) 926
BssT1I CCWWGG 2 cut(s) 180, 1367
Bst2UI CCWGG 2 cut(s) 115, 1335
Bst4CI ACNGT 2 cut(s) 863, 1152
Bst6I CTCTTC 2 cut(s) 82, 1239
BstACI GRCGYC 1 cut(s) 926
BstAPI GCANNNNNTGC 1 cut(s) 1220
BstC8I GCNNGC 2 cut(s) 837, 944
BstDEI CTNAG 7 cut(s) 240, 258, 342, 537, 693, 1317, 1358
BstDSI CCRYGG 4 cut(s) 180, 753, 1148, 1367
BstF5I GGATG 5 cut(s) 497, 644, 1264, 1327, 1388
BstFNI CGCG 1 cut(s) 19
BstH2I RGCGCY 1 cut(s) 929
BstHHI GCGC 1 cut(s) 928
BstKTI GATC 3 cut(s) 1073, 1102, 1396
BstMAI GTCTC 1 cut(s) 345
BstMBI GATC 3 cut(s) 1070, 1099, 1393
BstMWI GCNNNNNNNGC 2 cut(s) 689, 1220
BstNI CCWGG 2 cut(s) 115, 1335
BstSCI CCNGG 3 cut(s) 113, 462, 1333
BstSLI GKGCMC 1 cut(s) 1216
BstUI CGCG 1 cut(s) 19
BstV1I GCAGC 1 cut(s) 844
BstX2I RGATCY 2 cut(s) 1070, 1099
BstYI RGATCY 2 cut(s) 1070, 1099
Bsu15I ATCGAT 1 cut(s) 1392
BsuI GTATCC 1 cut(s) 1364
BsuRI GGCC 3 cut(s) 573, 1018, 1252
BsuTUI ATCGAT 1 cut(s) 1392
BtgI CCRYGG 4 cut(s) 180, 753, 1148, 1367
BtsCI GGATG 5 cut(s) 497, 644, 1264, 1327, 1388
BtsIMutI CAGTG 3 cut(s) 210, 868, 1260
Cac8I GCNNGC 2 cut(s) 837, 944
CaiI CAGNNNCTG 1 cut(s) 1020
CfoI GCGC 1 cut(s) 928
Cfr13I GGNCC 4 cut(s) 200, 453, 571, 1017
ClaI ATCGAT 1 cut(s) 1392
CviAII CATG 4 cut(s) 181, 309, 617, 1368
DdeI CTNAG 7 cut(s) 240, 258, 342, 537, 693, 1317, 1358
DinI GGCGCC 1 cut(s) 927
DpnI GATC 3 cut(s) 1072, 1101, 1395
DpnII GATC 3 cut(s) 1070, 1099, 1393
EaeI YGGCCR 1 cut(s) 1250
Eam1104I CTCTTC 2 cut(s) 82, 1239
EarI CTCTTC 2 cut(s) 82, 1239
Eco130I CCWWGG 2 cut(s) 180, 1367
Eco31I GGTCTC 1 cut(s) 345
Eco47I GGWCC 2 cut(s) 200, 453
Eco57I CTGAAG 1 cut(s) 1116
Eco88I CYCGRG 1 cut(s) 221
EcoO109I RGGNCCY 1 cut(s) 1017
EcoRI GAATTC 1 cut(s) 593
EcoRII CCWGG 2 cut(s) 113, 1333
EcoT14I CCWWGG 2 cut(s) 180, 1367
EcoT22I ATGCAT 1 cut(s) 256
EgeI GGCGCC 1 cut(s) 927
EheI GGCGCC 1 cut(s) 927
ErhI CCWWGG 2 cut(s) 180, 1367
FaeI CATG 4 cut(s) 184, 312, 620, 1371
FalI AAGNNNNNCTT 4 cut(s) 992, 1024, 1123, 1155
FaqI GGGAC 2 cut(s) 37, 439
FatI CATG 4 cut(s) 180, 308, 616, 1367
Fnu4HI GCNGC 1 cut(s) 833
FokI GGATG 5 cut(s) 484, 651, 1271, 1334, 1395
Fsp4HI GCNGC 1 cut(s) 833
FspBI CTAG 4 cut(s) 264, 285, 1086, 1191
GlaI GCGC 1 cut(s) 927
GluI GCNGC 1 cut(s) 833
HaeII RGCGCY 1 cut(s) 929
HaeIII GGCC 3 cut(s) 573, 1018, 1252
HapII CCGG 2 cut(s) 464, 507
HhaI GCGC 1 cut(s) 928
Hin1I GRCGYC 1 cut(s) 926
Hin1II CATG 4 cut(s) 184, 312, 620, 1371
Hin6I GCGC 1 cut(s) 926
HinP1I GCGC 1 cut(s) 926
HincII GTYRAC 2 cut(s) 168, 365
HindII GTYRAC 2 cut(s) 168, 365
HindIII AAGCTT 2 cut(s) 515, 989
HpaII CCGG 2 cut(s) 464, 507
HphI GGTGA 1 cut(s) 84
Hpy166II GTNNAC 3 cut(s) 168, 365, 442
Hpy188I TCNGA 7 cut(s) 325, 531, 976, 986, 1060, 1075, 1378
Hpy188III TCNNGA 3 cut(s) 275, 420, 536
Hpy8I GTNNAC 3 cut(s) 168, 365, 442
HpyAV CCTTC 5 cut(s) 105, 113, 202, 790, 971
HpyCH4III ACNGT 2 cut(s) 863, 1152
HpyCH4IV ACGT 1 cut(s) 663
HpyCH4V TGCA 8 cut(s) 233, 254, 512, 839, 1025, 1223, 1280, 1386
HpyF10VI GCNNNNNNNGC 2 cut(s) 689, 1220
HpyF3I CTNAG 7 cut(s) 240, 258, 342, 537, 693, 1317, 1358
HpySE526I ACGT 1 cut(s) 663
Hsp92I GRCGYC 1 cut(s) 926
Hsp92II CATG 4 cut(s) 184, 312, 620, 1371
HspAI GCGC 1 cut(s) 926
KasI GGCGCC 1 cut(s) 925
Kzo9I GATC 3 cut(s) 1070, 1099, 1393
LmnI GCTCC 2 cut(s) 120, 709
Lsp1109I GCAGC 1 cut(s) 844
LweI GCATC 5 cut(s) 204, 220, 263, 955, 1373
MaeI CTAG 4 cut(s) 264, 285, 1086, 1191
MaeII ACGT 1 cut(s) 663
MaeIII GTNAC 3 cut(s) 267, 428, 770
MalI GATC 3 cut(s) 1072, 1101, 1395
MboI GATC 3 cut(s) 1070, 1099, 1393
MboII GAAGA 8 cut(s) 69, 257, 403, 812, 1094, 1109, 1226, 1393
MfeI CAATTG 1 cut(s) 581
MflI RGATCY 2 cut(s) 1070, 1099
MhlI GDGCHC 1 cut(s) 1216
MlsI TGGCCA 1 cut(s) 1252
MluNI TGGCCA 1 cut(s) 1252
Mly113I GGCGCC 1 cut(s) 926
MlyI GAGTC 2 cut(s) 46, 1114
Mox20I TGGCCA 1 cut(s) 1252
Mph1103I ATGCAT 1 cut(s) 256
MroXI GAANNNNTTC 3 cut(s) 395, 593, 1101
MscI TGGCCA 1 cut(s) 1252
MseI TTAA 4 cut(s) 318, 858, 936, 1011
Msp20I TGGCCA 1 cut(s) 1252
MspI CCGG 2 cut(s) 464, 507
MspR9I CCNGG 3 cut(s) 115, 464, 1335
MunI CAATTG 1 cut(s) 581
MvaI CCWGG 2 cut(s) 115, 1335
MvnI CGCG 1 cut(s) 19
MwoI GCNNNNNNNGC 2 cut(s) 689, 1220
NarI GGCGCC 1 cut(s) 926
NciI CCSGG 1 cut(s) 464
NcoI CCATGG 2 cut(s) 180, 1367
NdeII GATC 3 cut(s) 1070, 1099, 1393
NlaIII CATG 4 cut(s) 184, 312, 620, 1371
NlaIV GGNNCC 5 cut(s) 455, 572, 699, 927, 1044
NmeAIII GCCGAG 1 cut(s) 599
NsiI ATGCAT 1 cut(s) 256
PasI CCCWGGG 1 cut(s) 1334
PdmI GAANNNNTTC 3 cut(s) 395, 593, 1101
PfeI GAWTC 9 cut(s) 47, 64, 370, 532, 545, 1055, 1205, 1229, 1297
PflMI CCANNNNNTGG 1 cut(s) 1259
PkrI GCNGC 1 cut(s) 834
PleI GAGTC 2 cut(s) 45, 1114
PluTI GGCGCC 1 cut(s) 929
PpsI GAGTC 2 cut(s) 45, 1114
PsiI TTATAA 1 cut(s) 24
Psp1406I AACGTT 1 cut(s) 663
Psp6I CCWGG 2 cut(s) 113, 1333
PspGI CCWGG 2 cut(s) 113, 1333
PspN4I GGNNCC 5 cut(s) 455, 572, 699, 927, 1044
PspPI GGNCC 4 cut(s) 200, 453, 571, 1017
PstNI CAGNNNCTG 1 cut(s) 1020
PsuI RGATCY 2 cut(s) 1070, 1099
SaqAI TTAA 4 cut(s) 318, 858, 936, 1011
SatI GCNGC 1 cut(s) 833
Sau3AI GATC 3 cut(s) 1070, 1099, 1393
Sau96I GGNCC 4 cut(s) 200, 453, 571, 1017
SchI GAGTC 2 cut(s) 46, 1114
ScrFI CCNGG 3 cut(s) 115, 464, 1335
SduI GDGCHC 1 cut(s) 1216
SfaNI GCATC 5 cut(s) 204, 220, 263, 955, 1373
SfoI GGCGCC 1 cut(s) 927
SinI GGWCC 2 cut(s) 200, 453
SpeI ACTAGT 1 cut(s) 284
SsiI CCGC 2 cut(s) 17, 330
SspDI GGCGCC 1 cut(s) 925
SspI AATATT 1 cut(s) 856
SspMI CTAG 4 cut(s) 264, 285, 1086, 1191
StyD4I CCNGG 3 cut(s) 113, 462, 1333
StyI CCWWGG 2 cut(s) 180, 1367
TaaI ACNGT 2 cut(s) 863, 1152
TaiI ACGT 1 cut(s) 666
TaqI TCGA 1 cut(s) 1392
TfiI GAWTC 9 cut(s) 47, 64, 370, 532, 545, 1055, 1205, 1229, 1297
Tru1I TTAA 4 cut(s) 318, 858, 936, 1011
Tru9I TTAA 4 cut(s) 318, 858, 936, 1011
TscAI CASTG 3 cut(s) 210, 868, 1260
TseI GCWGC 1 cut(s) 832
TspDTI ATGAA 4 cut(s) 17, 388, 605, 684
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 3 cut(s) 210, 868, 1260
Van91I CCANNNNNTGG 1 cut(s) 1259
VpaK11BI GGWCC 2 cut(s) 200, 453
XapI RAATTY 6 cut(s) 395, 564, 593, 651, 1048, 1169
XcmI CCANNNNNNNNNTGG 1 cut(s) 614
XmnI GAANNNNTTC 3 cut(s) 395, 593, 1101
XspI CTAG 4 cut(s) 264, 285, 1086, 1191
Zsp2I ATGCAT 1 cut(s) 256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.