pycom16g20340

Ribosomal RNA processing protein 1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0012270
Physical Location & Seq
Forward (+)
18092728 .. 18094437
1710 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1710 bp
ATGCAGGCATCTCACAATCTGAAACCACCGCATCAAACCTCAAAAATGGAGGCAGACACGGCGGTGGAAGCAGGCCTCTCCCTGATAAAGCAACTGGCCTCATGCAACAAAAGCAACCGAGACAGGGCCCTTAGGGTCCTGCTCAAAACATGGCTGCCGGCGCAACTCAACCTCCAAGATGACCACATGAAGAAGCTCTGGAAAGGCCTTTTCTACTGCCTGTGGCACGCCGACAAGGCCCCGGTCCAGACCCAGCTCATCGATCGTCTCTCCTCTCTGGTCCTCAGCCTCCACCTCCAGCTCTCCCTCCACTACTTCTCGGTGTTTTTGCTCACCATGCGCCGCGAGTGGCCCGGCATCGACGCCCTGAGGTTAGACAAGTTCTACTTATCGATTCGCAGATTTATGACTAGTTTCTTTACTTTGATGAGAAATAATTTGTGGGATTTGGAGCTTGTGAAACGTTTGATGGTTGTGTTGGAGGAGAGGACATTTTTTGCGGATGATAAGTGTTTGGGGAATGGGGTTAATTACCACATTGCCTCGGTTTTTCTCGAAGAGCTTAGGCCATTTCTTCCGATTAAGGCTGAAGTTCTTGAGGTTTTGATAGTTGGTTTTATTCGAGTTTCTGCCAAAGTGCCCGATAAGGTGTTGTTGGGGAAGATTAAGAGTAATTTGTTTGATGTGCTGCTTGGGGCGGCGAAGAGGCTGTTGGAGGTTAAGAAGTCGGGGGAGGACTTGGATTCGAGTGATGAGTTTGTTGTCTTCGGGACAGTTGCGCTGAAAATGGGGTTTGCAAGCAAGTTTTATGAATCGGGGTCTTCACCTGAGTGCTGCCAGGGGAATAGGAAAGTGTTGTTTGGCTTGCACGAGGAGTTTTTGATGTTGGAGAAAGAGTTGGAATCTTCTGGGGTTGAGATTTCTCTTCCTGATGTTGTTTATCATGATGATGAGGAGGTGCCGGATTTGGTGCCTCTTGCTGGTGAGGAGATGGATGTAAGTAACTCGGAGCCTGCTGAGATTGTCATTGCCAATGGGTCTGCTGGAAAGCGTTTGAAGAAGTGCAAGAAGAATGAGAAGGACACTGGTGGTGCTGATACAAAGGCAGAGAAGAAAAAGAAGAAGAAAAAAAAGAATAAGGAGGGGAATGGGAGTTTGGATGAAAAGAACTCTGCGGATAGGGATAATGAGAATGTAGCTGCAAATGGTGAGATTTCAGATGATCAGCAGGTCACTGATGCCGATGCTTTTAAACTTGATGATAATGTGATATCGAACTTGCAGATGCAGTTTGAGAAGATTGCTGCTGATGCTGGCTTGGATGACGATGTTCCAAGTGCCTGTGATTTGCCTTTAGTTTCAGATAAGGGTCCTATCTCTAAGAAGAGAAAGAGAATGAAGAAATCTGTTGAAGAAGATGCTGAGGGTGGCACGAATGCAAAGAGTGGGGAGAAGAGTGCAAAGAAGGTAAAGTTTTCCATGAAAAACAATTTGGTGTGGAAACCCCAAACCCCTTTACCTCCGCAAGATTTAAGACTGCCTCCTTCAGCTACACCTAGAGGAAGTGCACTCAAGAAAGGAGTACCGCCAGGTCCGATTTGGGAAATGCCTACACCTACTAAGAAGGTGAAAATGGTAAGAGTTGTTGCTGTCAAGAAGGCACGGAAGTCTGTCAAACGAGTAAAGAAGTTGAAATCTCGTCCTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000791 GO:0000792 GO:0001652 GO:0003674 GO:0003712 GO:0003713 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010563 GO:0010604 GO:0010628 GO:0010921 GO:0010923 GO:0010941 GO:0010942 GO:0016070 GO:0016072 GO:0019219 GO:0019220 GO:0019222 GO:0022613 GO:0030684 GO:0030687 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034260 GO:0034470 GO:0034641 GO:0034660 GO:0035303 GO:0035305 GO:0035821 GO:0042254 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043086 GO:0043087 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043900 GO:0043902 GO:0043903 GO:0043921 GO:0043923 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045936 GO:0045944 GO:0046483 GO:0046782 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048524 GO:0050434 GO:0050789 GO:0050790 GO:0050792 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051252 GO:0051254 GO:0051336 GO:0051346 GO:0051702 GO:0051704 GO:0051707 GO:0051817 GO:0051851 GO:0052312 GO:0052472 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098586 GO:0140110 GO:1901360 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nop52

Protein Analysis

570

Amino Acids

63.61

Weight (kDa)

9.18

Isoelectric Point (pI)

38.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nop52 PF05997 26 - 246 5.3e-63 Nucleolar protein,Nop52
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1219
AccB1I GGYRCC 2 cut(s) 958, 970
AccII CGCG 1 cut(s) 345
AciI CCGC 8 cut(s) 29, 62, 343, 500, 698, 1175, 1523, 1586
AclI AACGTT 1 cut(s) 463
AcuI CTGAAG 2 cut(s) 609, 1530
AcyI GRCGYC 1 cut(s) 363
AfaI GTAC 1 cut(s) 1584
AfiI CCNNNNNNNGG 2 cut(s) 124, 980
AgsI TTSAA 3 cut(s) 1057, 1412, 1693
AhlI ACTAGT 1 cut(s) 410
AjnI CCWGG 2 cut(s) 837, 1588
AjuI GAANNNNNNNTTGG 6 cut(s) 695, 727, 1139, 1171, 1475, 1507
AleI CACNNNNGTG 2 cut(s) 62, 829
AluBI AGCT 7 cut(s) 196, 256, 301, 454, 562, 1199, 1550
AluI AGCT 7 cut(s) 196, 256, 301, 454, 562, 1199, 1550
Alw21I GWGCWC 1 cut(s) 1570
Alw26I GTCTC 2 cut(s) 114, 272
Alw44I GTGCAC 1 cut(s) 1566
AoxI GGCC 7 cut(s) 73, 96, 126, 205, 237, 350, 566
ApaI GGGCCC 1 cut(s) 130
ApaLI GTGCAC 1 cut(s) 1566
ApeKI GCWGC 5 cut(s) 154, 688, 834, 1199, 1304
AspLEI GCGC 3 cut(s) 163, 342, 781
AspS9I GGNCC 9 cut(s) 126, 127, 136, 238, 244, 280, 351, 1370, 1592
AsuC2I CCSGG 2 cut(s) 242, 354
AsuHPI GGTGA 5 cut(s) 325, 816, 995, 1220, 1639
AvaII GGWCC 5 cut(s) 136, 244, 280, 1370, 1592
AxyI CCTNAGG 2 cut(s) 131, 368
BaeGI GKGCMC 3 cut(s) 130, 642, 1570
BanI GGYRCC 2 cut(s) 958, 970
BanII GRGCYC 1 cut(s) 130
BauI CACGAG 1 cut(s) 869
BbsI GAAGAC 2 cut(s) 757, 813
Bbv12I GWGCWC 1 cut(s) 1570
BbvCI CCTCAGC 2 cut(s) 284, 1422
BbvI GCAGC 5 cut(s) 141, 675, 821, 1186, 1291
BccI CCATC 2 cut(s) 463, 985
BceAI ACGGC 1 cut(s) 75
BciT130I CCWGG 2 cut(s) 839, 1590
BclI TGATCA 1 cut(s) 1222
BcnI CCSGG 2 cut(s) 242, 354
BcoDI GTCTC 2 cut(s) 114, 272
BcuI ACTAGT 1 cut(s) 410
BfaI CTAG 2 cut(s) 411, 1557
BfuAI ACCTGC 1 cut(s) 1219
BglI GCCNNNNNGGC 1 cut(s) 236
BisI GCNGC 7 cut(s) 155, 343, 689, 699, 835, 1200, 1305
BlsI GCNGC 7 cut(s) 156, 344, 690, 700, 836, 1201, 1306
Bme1390I CCNGG 4 cut(s) 242, 354, 839, 1590
Bme18I GGWCC 5 cut(s) 136, 244, 280, 1370, 1592
BmgT120I GGNCC 9 cut(s) 126, 127, 136, 238, 244, 280, 351, 1370, 1592
BmiI GGNNCC 7 cut(s) 128, 137, 240, 960, 972, 1011, 1371
BmrFI CCNGG 4 cut(s) 242, 354, 839, 1590
BmsI GCATC 8 cut(s) 17, 40, 366, 1228, 1234, 1275, 1300, 1408
BpiI GAAGAC 2 cut(s) 757, 813
BpmI CTGGAG 1 cut(s) 281
Bpu10I CCTNAGC 3 cut(s) 284, 563, 1422
BpuEI CTTGAG 2 cut(s) 617, 1556
BpuMI CCSGG 2 cut(s) 242, 354
Bsa29I ATCGAT 2 cut(s) 261, 392
BsaHI GRCGYC 1 cut(s) 363
BsaJI CCNNGG 3 cut(s) 240, 543, 838
BsaXI ACNNNNNCTCC 4 cut(s) 156, 186, 881, 911
Bsc4I CCNNNNNNNGG 2 cut(s) 124, 980
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 2 cut(s) 99, 1090
Bse21I CCTNAGG 2 cut(s) 131, 368
Bse3DI GCAATG 2 cut(s) 537, 1026
BseBI CCWGG 2 cut(s) 839, 1590
BseCI ATCGAT 2 cut(s) 261, 392
BseDI CCNNGG 3 cut(s) 240, 543, 838
BseGI GGATG 4 cut(s) 508, 1000, 1165, 1327
BseLI CCNNNNNNNGG 2 cut(s) 124, 980
BseMI GCAATG 2 cut(s) 537, 1026
BseMII CTCAG 5 cut(s) 298, 359, 819, 1008, 1413
BseNI ACTGG 2 cut(s) 99, 1090
BseRI GAGGAG 5 cut(s) 262, 497, 887, 968, 1001
BseSI GKGCMC 3 cut(s) 130, 642, 1570
BseXI GCAGC 5 cut(s) 141, 675, 821, 1186, 1291
BseYI CCCAGC 1 cut(s) 252
Bsh1236I CGCG 1 cut(s) 345
Bsh1285I CGRYCG 1 cut(s) 265
BshFI GGCC 7 cut(s) 75, 98, 128, 207, 239, 352, 568
BshNI GGYRCC 2 cut(s) 958, 970
BshVI ATCGAT 2 cut(s) 261, 392
BsiEI CGRYCG 1 cut(s) 265
BsiHKAI GWGCWC 1 cut(s) 1570
BsiSI CCGG 4 cut(s) 158, 242, 354, 962
BslFI GGGAC 1 cut(s) 784
BslI CCNNNNNNNGG 2 cut(s) 124, 980
BsmAI GTCTC 2 cut(s) 114, 272
BsmBI CGTCTC 1 cut(s) 272
BsmFI GGGAC 1 cut(s) 784
BsmI GAATGC 1 cut(s) 1441
BsnI GGCC 7 cut(s) 75, 98, 128, 207, 239, 352, 568
Bsp120I GGGCCC 1 cut(s) 126
Bsp1286I GDGCHC 3 cut(s) 130, 642, 1570
Bsp143I GATC 2 cut(s) 262, 1222
BspACI CCGC 8 cut(s) 29, 62, 343, 500, 698, 1175, 1523, 1586
BspANI GGCC 7 cut(s) 75, 98, 128, 207, 239, 352, 568
BspCNI CTCAG 5 cut(s) 297, 360, 820, 1009, 1414
BspDI ATCGAT 2 cut(s) 261, 392
BspFNI CGCG 1 cut(s) 345
BspHI TCATGA 1 cut(s) 943
BspLI GGNNCC 7 cut(s) 128, 137, 240, 960, 972, 1011, 1371
BspMI ACCTGC 1 cut(s) 1219
BspQI GCTCTTC 1 cut(s) 552
BspT107I GGYRCC 2 cut(s) 958, 970
BsrDI GCAATG 2 cut(s) 537, 1026
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 2 cut(s) 99, 1090
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 3 cut(s) 240, 543, 838
BssMI GATC 2 cut(s) 262, 1222
BssNI GRCGYC 1 cut(s) 363
BssSI CACGAG 1 cut(s) 869
Bst2BI CACGAG 1 cut(s) 869
Bst2UI CCWGG 2 cut(s) 839, 1590
Bst4CI ACNGT 1 cut(s) 775
Bst6I CTCTTC 5 cut(s) 552, 698, 930, 1379, 1448
BstACI GRCGYC 1 cut(s) 363
BstC8I GCNNGC 8 cut(s) 6, 73, 159, 228, 799, 866, 1014, 1315
BstF5I GGATG 4 cut(s) 508, 1000, 1165, 1327
BstFNI CGCG 1 cut(s) 345
BstHHI GCGC 3 cut(s) 163, 342, 781
BstKTI GATC 2 cut(s) 265, 1225
BstMAI GTCTC 2 cut(s) 114, 272
BstMBI GATC 2 cut(s) 262, 1222
BstMCI CGRYCG 1 cut(s) 265
BstMWI GCNNNNNNNGC 7 cut(s) 59, 68, 111, 160, 236, 337, 1310
BstNI CCWGG 2 cut(s) 839, 1590
BstSCI CCNGG 4 cut(s) 240, 352, 837, 1588
BstSLI GKGCMC 3 cut(s) 130, 642, 1570
BstUI CGCG 1 cut(s) 345
BstV1I GCAGC 5 cut(s) 141, 675, 821, 1186, 1291
BstV2I GAAGAC 2 cut(s) 757, 813
Bsu15I ATCGAT 2 cut(s) 261, 392
Bsu36I CCTNAGG 2 cut(s) 131, 368
BsuRI GGCC 7 cut(s) 75, 98, 128, 207, 239, 352, 568
BsuTUI ATCGAT 2 cut(s) 261, 392
BtsCI GGATG 4 cut(s) 508, 1000, 1165, 1327
BtsIMutI CAGTG 2 cut(s) 1083, 1233
BveI ACCTGC 1 cut(s) 1219
Cac8I GCNNGC 8 cut(s) 6, 73, 159, 228, 799, 866, 1014, 1315
CciI TCATGA 1 cut(s) 943
CfoI GCGC 3 cut(s) 163, 342, 781
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 9 cut(s) 126, 127, 136, 238, 244, 280, 351, 1370, 1592
ClaI ATCGAT 2 cut(s) 261, 392
CseI GACGC 1 cut(s) 371
Csp6I GTAC 1 cut(s) 1583
CviAII CATG 6 cut(s) 102, 150, 187, 337, 944, 1480
CviQI GTAC 1 cut(s) 1583
DpnI GATC 2 cut(s) 264, 1224
DpnII GATC 2 cut(s) 262, 1222
DraI TTTAAA 1 cut(s) 1252
Eam1104I CTCTTC 5 cut(s) 552, 698, 930, 1379, 1448
EarI CTCTTC 5 cut(s) 552, 698, 930, 1379, 1448
Eco147I AGGCCT 2 cut(s) 75, 207
Eco24I GRGCYC 1 cut(s) 130
Eco32I GATATC 1 cut(s) 1272
Eco47I GGWCC 5 cut(s) 136, 244, 280, 1370, 1592
Eco57I CTGAAG 2 cut(s) 609, 1530
Eco81I CCTNAGG 2 cut(s) 131, 368
EcoO109I RGGNCCY 5 cut(s) 126, 127, 136, 238, 1370
EcoRII CCWGG 2 cut(s) 837, 1588
EcoRV GATATC 1 cut(s) 1272
EcoT38I GRGCYC 1 cut(s) 130
Esp3I CGTCTC 1 cut(s) 272
FaeI CATG 6 cut(s) 105, 153, 190, 340, 947, 1483
FaiI YATR 8 cut(s) 103, 151, 188, 338, 407, 810, 945, 1481
FalI AAGNNNNNCTT 2 cut(s) 371, 403
FaqI GGGAC 1 cut(s) 784
FatI CATG 6 cut(s) 101, 149, 186, 336, 943, 1479
FbaI TGATCA 1 cut(s) 1222
Fnu4HI GCNGC 7 cut(s) 155, 343, 689, 699, 835, 1200, 1305
FokI GGATG 4 cut(s) 515, 1007, 1172, 1334
FriOI GRGCYC 1 cut(s) 130
Fsp4HI GCNGC 7 cut(s) 155, 343, 689, 699, 835, 1200, 1305
FspBI CTAG 2 cut(s) 411, 1557
GlaI GCGC 3 cut(s) 162, 341, 780
GluI GCNGC 7 cut(s) 155, 343, 689, 699, 835, 1200, 1305
GsaI CCCAGC 1 cut(s) 256
GsuI CTGGAG 1 cut(s) 281
HaeIII GGCC 7 cut(s) 75, 98, 128, 207, 239, 352, 568
HapII CCGG 4 cut(s) 158, 242, 354, 962
HgaI GACGC 1 cut(s) 371
HhaI GCGC 3 cut(s) 163, 342, 781
Hin1I GRCGYC 1 cut(s) 363
Hin1II CATG 6 cut(s) 105, 153, 190, 340, 947, 1483
Hin6I GCGC 3 cut(s) 161, 340, 779
HinP1I GCGC 3 cut(s) 161, 340, 779
HinfI GANTC 4 cut(s) 394, 743, 812, 902
HpaII CCGG 4 cut(s) 158, 242, 354, 962
HphI GGTGA 5 cut(s) 325, 816, 995, 1220, 1639
Hpy166II GTNNAC 1 cut(s) 1568
Hpy188I TCNGA 6 cut(s) 21, 579, 1009, 1219, 1363, 1596
Hpy188III TCNNGA 9 cut(s) 199, 247, 554, 596, 769, 929, 944, 1573, 1654
Hpy8I GTNNAC 1 cut(s) 1568
Hpy99I CGWCG 1 cut(s) 365
HpyAV CCTTC 5 cut(s) 1072, 1459, 1554, 1618, 1651
HpyCH4III ACNGT 1 cut(s) 775
HpyCH4IV ACGT 1 cut(s) 463
HpyF10VI GCNNNNNNNGC 7 cut(s) 59, 68, 111, 160, 236, 337, 1310
HpySE526I ACGT 1 cut(s) 463
Hsp92I GRCGYC 1 cut(s) 363
Hsp92II CATG 6 cut(s) 105, 153, 190, 340, 947, 1483
HspAI GCGC 3 cut(s) 161, 340, 779
KroI GCCGGC 1 cut(s) 157
KroNI GCCGGC 1 cut(s) 159
Ksp22I TGATCA 1 cut(s) 1222
Kzo9I GATC 2 cut(s) 262, 1222
LguI GCTCTTC 1 cut(s) 552
LmnI GCTCC 2 cut(s) 451, 1009
Lsp1109I GCAGC 5 cut(s) 141, 675, 821, 1186, 1291
LweI GCATC 8 cut(s) 17, 40, 366, 1228, 1234, 1275, 1300, 1408
MaeI CTAG 2 cut(s) 411, 1557
MaeII ACGT 1 cut(s) 463
MaeIII GTNAC 2 cut(s) 1001, 1231
MalI GATC 2 cut(s) 264, 1224
MboI GATC 2 cut(s) 262, 1222
MhlI GDGCHC 3 cut(s) 130, 642, 1570
MluCI AATT 4 cut(s) 436, 529, 673, 1489
MmeI TCCRAC 4 cut(s) 459, 693, 867, 879
MroNI GCCGGC 1 cut(s) 157
MseI TTAA 6 cut(s) 528, 582, 666, 720, 1251, 1532
MslI CAYNNNNRTG 3 cut(s) 62, 829, 948
MspI CCGG 4 cut(s) 158, 242, 354, 962
MspR9I CCNGG 4 cut(s) 242, 354, 839, 1590
Mva1269I GAATGC 1 cut(s) 1441
MvaI CCWGG 2 cut(s) 839, 1590
MvnI CGCG 1 cut(s) 345
MwoI GCNNNNNNNGC 7 cut(s) 59, 68, 111, 160, 236, 337, 1310
NaeI GCCGGC 1 cut(s) 159
NciI CCSGG 2 cut(s) 242, 354
NdeII GATC 2 cut(s) 262, 1222
NgoMIV GCCGGC 1 cut(s) 157
NlaIII CATG 6 cut(s) 105, 153, 190, 340, 947, 1483
NlaIV GGNNCC 7 cut(s) 128, 137, 240, 960, 972, 1011, 1371
NmuCI GTSAC 1 cut(s) 1231
OliI CACNNNNGTG 2 cut(s) 62, 829
PagI TCATGA 1 cut(s) 943
PceI AGGCCT 2 cut(s) 75, 207
PciSI GCTCTTC 1 cut(s) 552
PctI GAATGC 1 cut(s) 1441
PdiI GCCGGC 1 cut(s) 159
PfeI GAWTC 4 cut(s) 394, 743, 812, 902
PkrI GCNGC 7 cut(s) 156, 344, 690, 700, 836, 1201, 1306
Ple19I CGATCG 1 cut(s) 265
PpuMI RGGWCCY 2 cut(s) 136, 1370
Psp1406I AACGTT 1 cut(s) 463
Psp5II RGGWCCY 2 cut(s) 136, 1370
Psp6I CCWGG 2 cut(s) 837, 1588
PspFI CCCAGC 1 cut(s) 252
PspGI CCWGG 2 cut(s) 837, 1588
PspN4I GGNNCC 7 cut(s) 128, 137, 240, 960, 972, 1011, 1371
PspOMI GGGCCC 1 cut(s) 126
PspPI GGNCC 9 cut(s) 126, 127, 136, 238, 244, 280, 351, 1370, 1592
PspPPI RGGWCCY 2 cut(s) 136, 1370
PvuI CGATCG 1 cut(s) 265
RsaI GTAC 1 cut(s) 1584
RsaNI GTAC 1 cut(s) 1583
RseI CAYNNNNRTG 3 cut(s) 62, 829, 948
SapI GCTCTTC 1 cut(s) 552
SaqAI TTAA 6 cut(s) 528, 582, 666, 720, 1251, 1532
SatI GCNGC 7 cut(s) 155, 343, 689, 699, 835, 1200, 1305
Sau3AI GATC 2 cut(s) 262, 1222
Sau96I GGNCC 9 cut(s) 126, 127, 136, 238, 244, 280, 351, 1370, 1592
ScrFI CCNGG 4 cut(s) 242, 354, 839, 1590
SduI GDGCHC 3 cut(s) 130, 642, 1570
SfaNI GCATC 8 cut(s) 17, 40, 366, 1228, 1234, 1275, 1300, 1408
SinI GGWCC 5 cut(s) 136, 244, 280, 1370, 1592
SmiMI CAYNNNNRTG 3 cut(s) 62, 829, 948
SmlI CTYRAG 2 cut(s) 596, 1571
SmoI CTYRAG 2 cut(s) 596, 1571
SpeI ACTAGT 1 cut(s) 410
Sse9I AATT 4 cut(s) 436, 529, 673, 1489
SseBI AGGCCT 2 cut(s) 75, 207
SsiI CCGC 8 cut(s) 29, 62, 343, 500, 698, 1175, 1523, 1586
SspMI CTAG 2 cut(s) 411, 1557
StuI AGGCCT 2 cut(s) 75, 207
StyD4I CCNGG 4 cut(s) 240, 352, 837, 1588
TaaI ACNGT 1 cut(s) 775
TaiI ACGT 1 cut(s) 466
TaqI TCGA 7 cut(s) 261, 360, 392, 555, 622, 746, 1274
TasI AATT 4 cut(s) 436, 529, 673, 1489
TauI GCSGC 2 cut(s) 345, 701
TfiI GAWTC 4 cut(s) 394, 743, 812, 902
Tru1I TTAA 6 cut(s) 528, 582, 666, 720, 1251, 1532
Tru9I TTAA 6 cut(s) 528, 582, 666, 720, 1251, 1532
TscAI CASTG 2 cut(s) 1090, 1240
TseFI GTSAC 1 cut(s) 1231
TseI GCWGC 5 cut(s) 154, 688, 834, 1199, 1304
Tsp45I GTSAC 1 cut(s) 1231
TspDTI ATGAA 5 cut(s) 203, 825, 1176, 1412, 1496
TspGWI ACGGA 1 cut(s) 1678
TspRI CASTG 2 cut(s) 1090, 1240
VneI GTGCAC 1 cut(s) 1566
VpaK11BI GGWCC 5 cut(s) 136, 244, 280, 1370, 1592
XcmI CCANNNNNNNNNTGG 1 cut(s) 1596
XspI CTAG 2 cut(s) 411, 1557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.