first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15530 |
| fragaria_vesca | FvH4_6g47090 FvH4_6g47090 FvH4_6g47090 FvH4_6g47090 |
| malus_domestica | MD09G1064200.v1.1 MD10G1103400.v1.1 MD17G1057500.v1.1 |
| prunus_persica | Prupe.3G256800_v2.0.a1 |
| pyrus_communis | pycom111g05390 pycom17g05760 |
| rosa_chinensis | RchiOBHm_Chr2g0166141 |
| rosa_laevigata | RLG00000021589 |
| rosa_multiflora | Rmu_co8361143.1_g000001 Rmu_sc0006218.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00085170 |
| rosa_rugosa | Rorug02G0520700 Rorug02G0520700 |
| rosa_samantha | Rh2AG586700 Rh2BG598500 Rh2CG569200 Rh2DG608400 |
| rosa_wichuraiana | Rw2G048910 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 39, 52, 63, 66, 83 |
| AcuI | CTGAAG | 1 cut(s) | 140 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 186 |
| AjnI | CCWGG | 1 cut(s) | 185 |
| AluBI | AGCT | 2 cut(s) | 162, 205 |
| AluI | AGCT | 2 cut(s) | 162, 205 |
| Alw21I | GWGCWC | 1 cut(s) | 164 |
| AoxI | GGCC | 1 cut(s) | 151 |
| ApeKI | GCWGC | 2 cut(s) | 79, 123 |
| AspLEI | GCGC | 1 cut(s) | 38 |
| BanII | GRGCYC | 1 cut(s) | 164 |
| Bbv12I | GWGCWC | 1 cut(s) | 164 |
| BbvI | GCAGC | 2 cut(s) | 91, 110 |
| BceAI | ACGGC | 1 cut(s) | 58 |
| BciT130I | CCWGG | 1 cut(s) | 187 |
| BfmI | CTRYAG | 1 cut(s) | 140 |
| BisI | GCNGC | 5 cut(s) | 39, 66, 80, 83, 124 |
| BlsI | GCNGC | 5 cut(s) | 40, 67, 81, 84, 125 |
| Bme1390I | CCNGG | 1 cut(s) | 187 |
| BmiI | GGNNCC | 1 cut(s) | 61 |
| BmrFI | CCNGG | 1 cut(s) | 187 |
| BsaJI | CCNNGG | 2 cut(s) | 27, 55 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 186 |
| BseBI | CCWGG | 1 cut(s) | 187 |
| BseDI | CCNNGG | 2 cut(s) | 27, 55 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 186 |
| BseXI | GCAGC | 2 cut(s) | 91, 110 |
| BseYI | CCCAGC | 1 cut(s) | 69 |
| BsgI | GTGCAG | 1 cut(s) | 215 |
| BshFI | GGCC | 1 cut(s) | 153 |
| BsiHKAI | GWGCWC | 1 cut(s) | 164 |
| BslFI | GGGAC | 2 cut(s) | 2, 9 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 186 |
| BsmFI | GGGAC | 2 cut(s) | 2, 9 |
| BsnI | GGCC | 1 cut(s) | 153 |
| Bsp1286I | GDGCHC | 1 cut(s) | 164 |
| BspACI | CCGC | 5 cut(s) | 39, 52, 63, 66, 83 |
| BspANI | GGCC | 1 cut(s) | 153 |
| BspLI | GGNNCC | 1 cut(s) | 61 |
| BspMAI | CTGCAG | 1 cut(s) | 144 |
| BssECI | CCNNGG | 2 cut(s) | 27, 55 |
| BssT1I | CCWWGG | 1 cut(s) | 27 |
| Bst2UI | CCWGG | 1 cut(s) | 187 |
| Bst4CI | ACNGT | 1 cut(s) | 16 |
| Bst6I | CTCTTC | 1 cut(s) | 187 |
| BstC8I | GCNNGC | 2 cut(s) | 34, 198 |
| BstHHI | GCGC | 1 cut(s) | 38 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 38, 79, 88, 120, 159, 202 |
| BstNI | CCWGG | 1 cut(s) | 187 |
| BstSCI | CCNGG | 1 cut(s) | 185 |
| BstSFI | CTRYAG | 1 cut(s) | 140 |
| BstV1I | GCAGC | 2 cut(s) | 91, 110 |
| BsuRI | GGCC | 1 cut(s) | 153 |
| BtsIMutI | CAGTG | 1 cut(s) | 12 |
| Cac8I | GCNNGC | 2 cut(s) | 34, 198 |
| CfoI | GCGC | 1 cut(s) | 38 |
| CviJI | RGCY | 6 cut(s) | 60, 73, 82, 153, 162, 205 |
| CviKI_1 | RGCY | 6 cut(s) | 60, 73, 82, 153, 162, 205 |
| Eam1104I | CTCTTC | 1 cut(s) | 187 |
| EarI | CTCTTC | 1 cut(s) | 187 |
| EciI | GGCGGA | 1 cut(s) | 52 |
| Ecl136II | GAGCTC | 1 cut(s) | 162 |
| Eco130I | CCWWGG | 1 cut(s) | 27 |
| Eco24I | GRGCYC | 1 cut(s) | 164 |
| Eco53kI | GAGCTC | 1 cut(s) | 162 |
| Eco57I | CTGAAG | 1 cut(s) | 140 |
| EcoICRI | GAGCTC | 1 cut(s) | 162 |
| EcoRII | CCWGG | 1 cut(s) | 185 |
| EcoT14I | CCWWGG | 1 cut(s) | 27 |
| EcoT38I | GRGCYC | 1 cut(s) | 164 |
| ErhI | CCWWGG | 1 cut(s) | 27 |
| FaqI | GGGAC | 2 cut(s) | 2, 9 |
| FauI | CCCGC | 1 cut(s) | 59 |
| Fnu4HI | GCNGC | 5 cut(s) | 39, 66, 80, 83, 124 |
| FriOI | GRGCYC | 1 cut(s) | 164 |
| Fsp4HI | GCNGC | 5 cut(s) | 39, 66, 80, 83, 124 |
| GlaI | GCGC | 1 cut(s) | 37 |
| GluI | GCNGC | 5 cut(s) | 39, 66, 80, 83, 124 |
| GsaI | CCCAGC | 1 cut(s) | 73 |
| HaeIII | GGCC | 1 cut(s) | 153 |
| HhaI | GCGC | 1 cut(s) | 38 |
| Hin6I | GCGC | 1 cut(s) | 36 |
| HinP1I | GCGC | 1 cut(s) | 36 |
| HinfI | GANTC | 1 cut(s) | 5 |
| Hpy188I | TCNGA | 2 cut(s) | 159, 224 |
| Hpy188III | TCNNGA | 1 cut(s) | 169 |
| Hpy99I | CGWCG | 1 cut(s) | 79 |
| HpyAV | CCTTC | 3 cut(s) | 19, 112, 164 |
| HpyCH4III | ACNGT | 1 cut(s) | 16 |
| HpyCH4V | TGCA | 2 cut(s) | 142, 196 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 38, 79, 88, 120, 159, 202 |
| HspAI | GCGC | 1 cut(s) | 36 |
| LmnI | GCTCC | 2 cut(s) | 65, 167 |
| LpnPI | CCDG | 9 cut(s) | 34, 83, 101, 110, 135, 154, 172, 182, 199 |
| Lsp1109I | GCAGC | 2 cut(s) | 91, 110 |
| MaeIII | GTNAC | 1 cut(s) | 46 |
| MboII | GAAGA | 1 cut(s) | 174 |
| MhlI | GDGCHC | 1 cut(s) | 164 |
| MnlI | CCTC | 6 cut(s) | 65, 104, 125, 145, 190, 205 |
| MseI | TTAA | 1 cut(s) | 207 |
| MspR9I | CCNGG | 1 cut(s) | 187 |
| MvaI | CCWGG | 1 cut(s) | 187 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 38, 79, 88, 120, 159, 202 |
| NlaIV | GGNNCC | 1 cut(s) | 61 |
| NmeAIII | GCCGAG | 1 cut(s) | 36 |
| PfeI | GAWTC | 1 cut(s) | 5 |
| PfoI | TCCNGGA | 1 cut(s) | 185 |
| PkrI | GCNGC | 5 cut(s) | 40, 67, 81, 84, 125 |
| Psp124BI | GAGCTC | 1 cut(s) | 164 |
| Psp6I | CCWGG | 1 cut(s) | 185 |
| PspFI | CCCAGC | 1 cut(s) | 69 |
| PspGI | CCWGG | 1 cut(s) | 185 |
| PspN4I | GGNNCC | 1 cut(s) | 61 |
| PstI | CTGCAG | 1 cut(s) | 144 |
| SacI | GAGCTC | 1 cut(s) | 164 |
| SaqAI | TTAA | 1 cut(s) | 207 |
| SatI | GCNGC | 5 cut(s) | 39, 66, 80, 83, 124 |
| ScrFI | CCNGG | 1 cut(s) | 187 |
| SduI | GDGCHC | 1 cut(s) | 164 |
| SetI | ASST | 4 cut(s) | 96, 164, 207, 216 |
| SfcI | CTRYAG | 1 cut(s) | 140 |
| SsiI | CCGC | 5 cut(s) | 39, 52, 63, 66, 83 |
| SstI | GAGCTC | 1 cut(s) | 164 |
| StyD4I | CCNGG | 1 cut(s) | 185 |
| StyI | CCWWGG | 1 cut(s) | 27 |
| TaaI | ACNGT | 1 cut(s) | 16 |
| TauI | GCSGC | 3 cut(s) | 41, 68, 85 |
| TfiI | GAWTC | 1 cut(s) | 5 |
| Tru1I | TTAA | 1 cut(s) | 207 |
| Tru9I | TTAA | 1 cut(s) | 207 |
| TscAI | CASTG | 1 cut(s) | 19 |
| TseI | GCWGC | 2 cut(s) | 79, 123 |
| TspGWI | ACGGA | 1 cut(s) | 154 |
| TspRI | CASTG | 1 cut(s) | 19 |