pycom17g09500

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
7247248 .. 7247818
571 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 531 bp
ATGATTTGTTGGGCGTTCCAACTCTGGGTGAAGGGGGGAATAGCTGAAAATGTGAATAACTCTTTTCCTGCTGGTGTCGATTGGGTTCAAGACAACCAATTGCAGATCACTAGCAACAAGGATCTTGATAATAAGACTACCGAGGAGAATGATGATTTATTTGATGCTTGGAATGATTTTGCAAGCTCGAGCAATGCACCAAATCTTGTTGATAGTTCTGTAAAACAAAGTAGTGTCGATTGGGTTCGAGACAACCAAATGCAGACCACCAGCAACAAGGCTCTTTATCATAAGACTACTGATGCGGGTGATGATTCATTCGATGCTTGGAATGATCTTGCTAGCTCGAATAATGCATCAAATCTTGCAGATAATTCTGTAAAACAAAGTATTAATCAGACAACTTCTGTTGACCACACTTCAGAAACAAATTTGTTTGGCACTAGCAACTCGGTGACTTGGCTTTTGGTAGCTTTTTGCAATTATATGGGTGCTATTATAGCTGCCGAATCCTGTTTCGAATCACCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

177

Amino Acids

19.37

Weight (kDa)

4.05

Isoelectric Point (pI)

44.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 305
AclWI GGATC 1 cut(s) 129
AcsI RAATTY 1 cut(s) 430
AcuI CTGAAG 1 cut(s) 405
AfiI CCNNNNNNNGG 1 cut(s) 25
AgsI TTSAA 1 cut(s) 89
AluBI AGCT 5 cut(s) 44, 186, 345, 473, 503
AluI AGCT 5 cut(s) 44, 186, 345, 473, 503
Alw26I GTCTC 1 cut(s) 243
AlwI GGATC 1 cut(s) 129
Ama87I CYCGRG 1 cut(s) 187
ApeKI GCWGC 1 cut(s) 503
ApoI RAATTY 1 cut(s) 430
ArsI GACNNNNNNTTYG 2 cut(s) 448, 480
AseI ATTAAT 1 cut(s) 393
AsuHPI GGTGA 4 cut(s) 40, 320, 466, 516
AsuII TTCGAA 1 cut(s) 519
AsuNHI GCTAGC 1 cut(s) 341
AvaI CYCGRG 1 cut(s) 187
BbvI GCAGC 1 cut(s) 490
BcoDI GTCTC 1 cut(s) 243
BfaI CTAG 3 cut(s) 111, 342, 444
BisI GCNGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 505
BmeT110I CYCGRG 1 cut(s) 187
BmsI GCATC 4 cut(s) 154, 292, 313, 365
BmtI GCTAGC 1 cut(s) 345
Bpu14I TTCGAA 1 cut(s) 519
BsaJI CCNNGG 1 cut(s) 141
Bsc4I CCNNNNNNNGG 1 cut(s) 25
Bse3DI GCAATG 1 cut(s) 199
BseDI CCNNGG 1 cut(s) 141
BseLI CCNNNNNNNGG 1 cut(s) 25
BseMI GCAATG 1 cut(s) 199
BseRI GAGGAG 1 cut(s) 158
BseXI GCAGC 1 cut(s) 490
BsiHKCI CYCGRG 1 cut(s) 187
BslI CCNNNNNNNGG 1 cut(s) 25
BsmAI GTCTC 1 cut(s) 243
BsoBI CYCGRG 1 cut(s) 187
Bsp119I TTCGAA 1 cut(s) 519
Bsp143I GATC 3 cut(s) 105, 121, 334
BspACI CCGC 1 cut(s) 305
BspOI GCTAGC 1 cut(s) 345
BspPI GGATC 1 cut(s) 129
BspT104I TTCGAA 1 cut(s) 519
BsrDI GCAATG 1 cut(s) 199
BssECI CCNNGG 1 cut(s) 141
BssMI GATC 3 cut(s) 105, 121, 334
Bst4CI ACNGT 1 cut(s) 528
BstBI TTCGAA 1 cut(s) 519
BstC8I GCNNGC 2 cut(s) 184, 343
BstKTI GATC 3 cut(s) 108, 124, 337
BstMAI GTCTC 1 cut(s) 243
BstMBI GATC 3 cut(s) 105, 121, 334
BstMWI GCNNNNNNNGC 1 cut(s) 500
BstV1I GCAGC 1 cut(s) 490
BstX2I RGATCY 1 cut(s) 121
BstYI RGATCY 1 cut(s) 121
Cac8I GCNNGC 2 cut(s) 184, 343
CviJI RGCY 7 cut(s) 44, 186, 281, 345, 463, 473, 503
CviKI_1 RGCY 7 cut(s) 44, 186, 281, 345, 463, 473, 503
DpnI GATC 3 cut(s) 107, 123, 336
DpnII GATC 3 cut(s) 105, 121, 334
Eco57I CTGAAG 1 cut(s) 405
Eco88I CYCGRG 1 cut(s) 187
EcoT22I ATGCAT 1 cut(s) 358
FaiI YATR 4 cut(s) 291, 486, 488, 500
FauI CCCGC 1 cut(s) 298
Fnu4HI GCNGC 1 cut(s) 504
Fsp4HI GCNGC 1 cut(s) 504
FspBI CTAG 3 cut(s) 111, 342, 444
GluI GCNGC 1 cut(s) 504
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HinfI GANTC 3 cut(s) 314, 509, 521
HphI GGTGA 4 cut(s) 40, 320, 466, 516
Hpy166II GTNNAC 1 cut(s) 412
Hpy188I TCNGA 2 cut(s) 399, 424
Hpy188III TCNNGA 3 cut(s) 89, 125, 248
Hpy8I GTNNAC 1 cut(s) 412
HpyAV CCTTC 1 cut(s) 25
HpyCH4III ACNGT 1 cut(s) 528
HpyCH4V TGCA 7 cut(s) 103, 182, 197, 262, 356, 368, 480
HpyF10VI GCNNNNNNNGC 1 cut(s) 500
Kzo9I GATC 3 cut(s) 105, 121, 334
LpnPI CCDG 5 cut(s) 10, 57, 81, 283, 526
Lsp1109I GCAGC 1 cut(s) 490
LweI GCATC 4 cut(s) 154, 292, 313, 365
MaeI CTAG 3 cut(s) 111, 342, 444
MaeIII GTNAC 1 cut(s) 454
MalI GATC 3 cut(s) 107, 123, 336
MboI GATC 3 cut(s) 105, 121, 334
MfeI CAATTG 1 cut(s) 98
MflI RGATCY 1 cut(s) 121
MluCI AATT 4 cut(s) 98, 373, 430, 481
MmeI TCCRAC 1 cut(s) 43
MnlI CCTC 1 cut(s) 136
Mph1103I ATGCAT 1 cut(s) 358
MseI TTAA 1 cut(s) 393
MunI CAATTG 1 cut(s) 98
MwoI GCNNNNNNNGC 1 cut(s) 500
NdeII GATC 3 cut(s) 105, 121, 334
NheI GCTAGC 1 cut(s) 341
NmuCI GTSAC 1 cut(s) 454
NsiI ATGCAT 1 cut(s) 358
NspV TTCGAA 1 cut(s) 519
PaeR7I CTCGAG 1 cut(s) 187
PfeI GAWTC 3 cut(s) 314, 509, 521
PkrI GCNGC 1 cut(s) 505
PshBI ATTAAT 1 cut(s) 393
PspXI VCTCGAGB 1 cut(s) 187
PsuI RGATCY 1 cut(s) 121
SaqAI TTAA 1 cut(s) 393
SatI GCNGC 1 cut(s) 504
Sau3AI GATC 3 cut(s) 105, 121, 334
SetI ASST 5 cut(s) 46, 188, 347, 475, 505
SfaNI GCATC 4 cut(s) 154, 292, 313, 365
Sfr274I CTCGAG 1 cut(s) 187
SfuI TTCGAA 1 cut(s) 519
SlaI CTCGAG 1 cut(s) 187
SmlI CTYRAG 1 cut(s) 187
SmoI CTYRAG 1 cut(s) 187
Sse9I AATT 4 cut(s) 98, 373, 430, 481
SsiI CCGC 1 cut(s) 305
SspMI CTAG 3 cut(s) 111, 342, 444
TaaI ACNGT 1 cut(s) 528
TaqI TCGA 7 cut(s) 78, 188, 237, 247, 321, 347, 519
TasI AATT 4 cut(s) 98, 373, 430, 481
TfiI GAWTC 3 cut(s) 314, 509, 521
Tru1I TTAA 1 cut(s) 393
Tru9I TTAA 1 cut(s) 393
TseFI GTSAC 1 cut(s) 454
TseI GCWGC 1 cut(s) 503
Tsp45I GTSAC 1 cut(s) 454
TspDTI ATGAA 1 cut(s) 306
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 1 cut(s) 430
XhoI CTCGAG 1 cut(s) 187
XspI CTAG 3 cut(s) 111, 342, 444
Zsp2I ATGCAT 1 cut(s) 358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.