Rroxscaffold_2G00091140

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0006274
Physical Location & Seq
Reverse (-)
12771619 .. 12774300
2682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00091140.1

Sequence Viewer

Length: 1950 bp
ATGGCCGTGGAAATCCCGACGGATGCGATAAAGCAGCTGCAGATCTTGCTTCGAAAACAAGCCAAGATGTCGTCGTACGACCCAGACGACACGCCGTTGGCAAATCTCCCTTCTCCGGAAGAAACCATATCGGAGCTGGATCCGTCACCGCCGTACCTCCGGTGCAAGCATTGCAGAGGCCGACTTCTCAGAGGCGTAGCGTCTCTGAGTTGCGTCTTCTGTGGCGCAGAAACCTGCAAGGACCTGCCTCCTGATCCTATCAATTTCCGCAACACTTTAGGGTTCCGGTGGTTGCTCAAGTCCTTGGCTCTAGATGGATCGGAGATAGTGGACCTACCAACTAAAGCGAATGAATCCAGTAGAGGCCAGAATGCAGCCAAGGATGAGTTAACCGTGTCTGAGCTTTTAAATGTAGAAATAAGATGGACTTCTAAGTCAGAGAAATCCGGGGCTGGGCTTTCGGATGAGAAGGCTCCCACTCGGCCTAAAAGGTTTTTGGATTTGGCTGGAGTGAATCTGGACAACTTCTTTTCTGAAGGAGAGAAAGATGCTGCTTTGAATGCATCTGAAGAGCCGTTTGAGCCCAGCTCTCCGACTGCAACTACAGAGAGTAGTGCTTTCAAACGTAGTGAAAATCTTAGTTTGTTTGCATCAGAAGAGCCGTTTGAGCCGAACAAACCAATTGCTACTACAGAGAGTAGTGCTTTCAAAGGTAGTGAAAATCTTAGTATATTTGCGTTTGAGCCAAGCAAACAGATTGCCACTACAGAGAGTGGTGCGTTCCAAGGTAGTGAAAATCTTAGTTTCTTTGCGTCTGAGAAGCCGTTTGAGTCGGGCAAACAGATTACCACCACAGAGAGTACTGCTTTTCAAGGTCATGAAAATCTTAGCTTGTTTGAGAATGTGCAGCCTTCTGCGACAGCTGTGCAGTCTACTCAAGGTGAGAGCGGTGATTCCATTTCCAGTTGGCCGGCAAGTTTTCAGTCAGCTGCTTCAGAAAATGTTCCTCAAGAATCAAAATCACTTGACCCCTTTGTGGGTTCTACAGTTGATCTTTCTACCCATATAGACACGGTGTTTGGATCTGTTGGGGACTCGACTAATGTAAAATCAAACCATAGTACATCCACGAGTAATGACTGGTTTTCAGATGATTTATTGAGTATTTCCAACTCTGGGTTAGCCGGGCAGCCTCAACAGTTAGAATCACTTTCTACAGTGAAGGATGACAGAATAGCTGAAAATGCAAAGAACTTATTATCTACTGGTGTTGATTGGGTTGAAGACACTCAATGGCTGACCACTAGCAAGGAGGCTCCTGATAATACGACAGCTGATGAGGATGATGATTCGTTTGGTGCTTGGAATGATTTTACTAGCTCGAGTAGTGCACAGAATCCATCTAGCTCTTCAAAACAAACTGTCAATCAGACAACAGCTCCTGACAAGAATTCAGTAACAAATCTGTTCAGCACAGCTAGCAATTCACAGGATGATGATTCGTTTGGTGCTTGGAATGATTTTACTAGCTTGAGTAGTGCACAGAATGGTTCTAGCTCTTCAAAACAAACTGTCGATCAGATGACACCTGATGATGAGACGTCAGTAACAAATCTGTTCAGCACAGCTAGCAACTCACAGGACTTGGATTTTGGTAACTTTTCGCAGCCAGATCTCTCTGCTGGAGCAATTAGCAGTTCACATGGTTCTACAGTAGTGAATATATCCCAGCCAGAGGCTTCTGTTTTAGACAGGATGGCTGATGCGGGCCCAAAAGATGAAGATGTTGCGAAGGATGGAGGAGATATTTTTAGTGCAAAAACAGGATCAAAGACTGAAGATGTGGAGAAAATAATGTCACAGATGCATGATCTCTCTTTTATGCTTGAGAGCAATCTTTCAATACCTCCCAAGCGAGATGTACATTCACTTTCCCAAGATCACACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

649

Amino Acids

69.7

Weight (kDa)

4.36

Isoelectric Point (pI)

49.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7815 PF25122 51 - 77 1e-13 Domain of unknown function (DUF7815)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 433
AatII GACGTC 1 cut(s) 1604
Acc36I ACCTGC 2 cut(s) 242, 252
AccBSI CCGCTC 1 cut(s) 948
AccI GTMKAC 1 cut(s) 932
AccIII TCCGGA 1 cut(s) 115
AciI CCGC 4 cut(s) 149, 268, 948, 1766
AclWI GGATC 6 cut(s) 134, 147, 248, 325, 1090, 1834
AcoI YGGCCR 2 cut(s) 3, 968
AcsI RAATTY 1 cut(s) 1450
AcuI CTGAAG 4 cut(s) 555, 588, 978, 1857
AcyI GRCGYC 1 cut(s) 1601
AfaI GTAC 5 cut(s) 77, 155, 862, 1123, 1923
AfiI CCNNNNNNNGG 6 cut(s) 115, 453, 1036, 1037, 1176, 1735
AgsI TTSAA 8 cut(s) 559, 622, 709, 872, 1283, 1413, 1563, 1902
Alw21I GWGCWC 2 cut(s) 1393, 1543
Alw26I GTCTC 2 cut(s) 207, 1592
Alw44I GTGCAC 2 cut(s) 1389, 1539
AlwI GGATC 6 cut(s) 134, 147, 248, 325, 1090, 1834
AlwNI CAGNNNCTG 1 cut(s) 1442
Ama87I CYCGRG 1 cut(s) 1381
Aor13HI TCCGGA 1 cut(s) 115
AoxI GGCC 6 cut(s) 3, 178, 364, 482, 968, 1768
ApaI GGGCCC 1 cut(s) 1772
ApaLI GTGCAC 2 cut(s) 1389, 1539
ApeKI GCWGC 8 cut(s) 34, 37, 374, 551, 907, 989, 1189, 1666
ApoI RAATTY 1 cut(s) 1450
ArsI GACNNNNNNTTYG 4 cut(s) 1061, 1093, 1634, 1666
Asp700I GAANNNNTTC 1 cut(s) 1002
AspLEI GCGC 1 cut(s) 227
AspS9I GGNCC 4 cut(s) 241, 331, 1768, 1769
AsuC2I CCSGG 2 cut(s) 448, 1186
AsuHPI GGTGA 3 cut(s) 138, 953, 962
AsuII TTCGAA 1 cut(s) 52
AsuNHI GCTAGC 2 cut(s) 1478, 1628
AvaI CYCGRG 1 cut(s) 1381
AvaII GGWCC 2 cut(s) 241, 331
BaeGI GKGCMC 3 cut(s) 1393, 1543, 1772
BaeI ACNNNNGTAYC 2 cut(s) 137, 170
BamHI GGATCC 1 cut(s) 139
BanII GRGCYC 2 cut(s) 585, 1772
BauI CACGAG 1 cut(s) 1129
BbsI GAAGAC 2 cut(s) 208, 1290
Bbv12I GWGCWC 2 cut(s) 1393, 1543
BbvI GCAGC 8 cut(s) 24, 46, 386, 538, 919, 976, 1201, 1678
BccI CCATC 5 cut(s) 308, 417, 1408, 1750, 1790
BceAI ACGGC 5 cut(s) 79, 136, 559, 646, 808
BcgI CGANNNNNNTGC 2 cut(s) 907, 941
BcnI CCSGG 2 cut(s) 448, 1186
BcoDI GTCTC 2 cut(s) 207, 1592
BfaI CTAG 8 cut(s) 311, 1305, 1377, 1404, 1479, 1527, 1554, 1629
BfmI CTRYAG 7 cut(s) 38, 603, 690, 765, 1044, 1215, 1710
BfuAI ACCTGC 2 cut(s) 242, 252
BglII AGATCT 2 cut(s) 42, 1672
BisI GCNGC 8 cut(s) 35, 38, 375, 552, 908, 990, 1190, 1667
BlsI GCNGC 8 cut(s) 36, 39, 376, 553, 909, 991, 1191, 1668
BmcAI AGTACT 1 cut(s) 862
Bme1390I CCNGG 2 cut(s) 448, 1186
Bme18I GGWCC 2 cut(s) 241, 331
BmeT110I CYCGRG 1 cut(s) 1381
BmgT120I GGNCC 4 cut(s) 241, 331, 1768, 1769
BmiI GGNNCC 5 cut(s) 141, 284, 474, 1317, 1770
BmrFI CCNGG 2 cut(s) 448, 1186
BmsI GCATC 6 cut(s) 13, 538, 572, 659, 1753, 1854
BmtI GCTAGC 2 cut(s) 1482, 1632
BpiI GAAGAC 2 cut(s) 208, 1290
BplI GAGNNNNNCTC 2 cut(s) 572, 604
BpmI CTGGAG 2 cut(s) 528, 1704
Bpu14I TTCGAA 1 cut(s) 52
BpuEI CTTGAG 5 cut(s) 281, 921, 993, 1552, 1907
BpuMI CCSGG 2 cut(s) 448, 1186
BsaHI GRCGYC 1 cut(s) 1601
BsaJI CCNNGG 5 cut(s) 6, 303, 378, 447, 784
BsaWI WCCGGW 3 cut(s) 115, 159, 285
BsaXI ACNNNNNCTCC 2 cut(s) 1423, 1453
Bsc4I CCNNNNNNNGG 6 cut(s) 115, 453, 1036, 1037, 1176, 1735
Bse118I RCCGGY 1 cut(s) 970
Bse1I ACTGG 4 cut(s) 357, 963, 1145, 1270
Bse3DI GCAATG 1 cut(s) 169
BseAI TCCGGA 1 cut(s) 115
BseDI CCNNGG 5 cut(s) 6, 303, 378, 447, 784
BseGI GGATG 9 cut(s) 28, 388, 469, 1124, 1231, 1348, 1498, 1761, 1801
BseLI CCNNNNNNNGG 6 cut(s) 115, 453, 1036, 1037, 1176, 1735
BseMI GCAATG 1 cut(s) 169
BseMII CTCAG 4 cut(s) 197, 202, 390, 807
BseNI ACTGG 4 cut(s) 357, 963, 1145, 1270
BseRI GAGGAG 1 cut(s) 1815
BseSI GKGCMC 3 cut(s) 1393, 1543, 1772
BseXI GCAGC 8 cut(s) 24, 46, 386, 538, 919, 976, 1201, 1678
BseYI CCCAGC 3 cut(s) 452, 584, 1728
BsgI GTGCAG 2 cut(s) 926, 947
BshFI GGCC 6 cut(s) 5, 180, 366, 484, 970, 1770
BsiHKAI GWGCWC 2 cut(s) 1393, 1543
BsiHKCI CYCGRG 1 cut(s) 1381
BsiSI CCGG 6 cut(s) 116, 160, 286, 447, 971, 1185
BsiWI CGTACG 1 cut(s) 75
BslFI GGGAC 1 cut(s) 1106
BslI CCNNNNNNNGG 6 cut(s) 115, 453, 1036, 1037, 1176, 1735
BsmAI GTCTC 2 cut(s) 207, 1592
BsmBI CGTCTC 2 cut(s) 207, 1592
BsmFI GGGAC 1 cut(s) 1106
BsmI GAATGC 2 cut(s) 376, 565
BsnI GGCC 6 cut(s) 5, 180, 366, 484, 970, 1770
BsoBI CYCGRG 1 cut(s) 1381
Bsp119I TTCGAA 1 cut(s) 52
Bsp120I GGGCCC 1 cut(s) 1768
Bsp1286I GDGCHC 4 cut(s) 585, 1393, 1543, 1772
Bsp13I TCCGGA 1 cut(s) 115
Bsp1407I TGTACA 1 cut(s) 1921
BspACI CCGC 4 cut(s) 149, 268, 948, 1766
BspANI GGCC 6 cut(s) 5, 180, 366, 484, 970, 1770
BspCNI CTCAG 4 cut(s) 198, 201, 391, 808
BspEI TCCGGA 1 cut(s) 115
BspHI TCATGA 1 cut(s) 877
BspLI GGNNCC 5 cut(s) 141, 284, 474, 1317, 1770
BspMAI CTGCAG 1 cut(s) 42
BspMI ACCTGC 2 cut(s) 242, 252
BspOI GCTAGC 2 cut(s) 1482, 1632
BspPI GGATC 6 cut(s) 134, 147, 248, 325, 1090, 1834
BspQI GCTCTTC 4 cut(s) 564, 651, 1414, 1564
BspT104I TTCGAA 1 cut(s) 52
BsrBI CCGCTC 1 cut(s) 948
BsrDI GCAATG 1 cut(s) 169
BsrFI RCCGGY 1 cut(s) 970
BsrGI TGTACA 1 cut(s) 1921
BsrI ACTGG 4 cut(s) 357, 963, 1145, 1270
BssAI RCCGGY 1 cut(s) 970
BssECI CCNNGG 5 cut(s) 6, 303, 378, 447, 784
BssNI GRCGYC 1 cut(s) 1601
BssSI CACGAG 1 cut(s) 1129
BssT1I CCWWGG 3 cut(s) 303, 378, 784
Bst2BI CACGAG 1 cut(s) 1129
Bst4CI ACNGT 8 cut(s) 394, 1048, 1075, 1200, 1219, 1423, 1573, 1714
Bst6I CTCTTC 4 cut(s) 564, 651, 1414, 1564
BstACI GRCGYC 1 cut(s) 1601
BstAPI GCANNNNNTGC 2 cut(s) 46, 171
BstAUI TGTACA 1 cut(s) 1921
BstBI TTCGAA 1 cut(s) 52
BstC8I GCNNGC 5 cut(s) 167, 972, 1480, 1630, 1768
BstDEI CTNAG 9 cut(s) 188, 206, 399, 432, 638, 725, 800, 816, 887
BstDSI CCRYGG 1 cut(s) 6
BstF5I GGATG 9 cut(s) 28, 388, 469, 1124, 1231, 1348, 1498, 1761, 1801
BstHHI GCGC 1 cut(s) 227
BstMAI GTCTC 2 cut(s) 207, 1592
BstMWI GCNNNNNNNGC 8 cut(s) 46, 171, 560, 580, 667, 1244, 1479, 1629
BstSCI CCNGG 2 cut(s) 446, 1184
BstSFI CTRYAG 7 cut(s) 38, 603, 690, 765, 1044, 1215, 1710
BstSLI GKGCMC 3 cut(s) 1393, 1543, 1772
BstV1I GCAGC 8 cut(s) 24, 46, 386, 538, 919, 976, 1201, 1678
BstV2I GAAGAC 2 cut(s) 208, 1290
BstX2I RGATCY 4 cut(s) 42, 139, 1082, 1672
BstYI RGATCY 4 cut(s) 42, 139, 1082, 1672
BsuRI GGCC 6 cut(s) 5, 180, 366, 484, 970, 1770
BtgI CCRYGG 1 cut(s) 6
BtsCI GGATG 9 cut(s) 28, 388, 469, 1124, 1231, 1348, 1498, 1761, 1801
BtsIMutI CAGTG 1 cut(s) 1224
BveI ACCTGC 2 cut(s) 242, 252
Cac8I GCNNGC 5 cut(s) 167, 972, 1480, 1630, 1768
CaiI CAGNNNCTG 1 cut(s) 1442
CciI TCATGA 1 cut(s) 877
CfoI GCGC 1 cut(s) 227
Cfr10I RCCGGY 1 cut(s) 970
Cfr13I GGNCC 4 cut(s) 241, 331, 1768, 1769
CseI GACGC 3 cut(s) 189, 202, 801
Csp6I GTAC 5 cut(s) 76, 154, 861, 1122, 1922
CviAII CATG 3 cut(s) 878, 1703, 1868
CviQI GTAC 5 cut(s) 76, 154, 861, 1122, 1922
DdeI CTNAG 9 cut(s) 188, 206, 399, 432, 638, 725, 800, 816, 887
DraI TTTAAA 1 cut(s) 408
DrdI GACNNNNNNGTC 1 cut(s) 433
DseDI GACNNNNNNGTC 1 cut(s) 433
EaeI YGGCCR 2 cut(s) 3, 968
Eam1104I CTCTTC 4 cut(s) 564, 651, 1414, 1564
EarI CTCTTC 4 cut(s) 564, 651, 1414, 1564
Eco130I CCWWGG 3 cut(s) 303, 378, 784
Eco24I GRGCYC 2 cut(s) 585, 1772
Eco47I GGWCC 2 cut(s) 241, 331
Eco57I CTGAAG 4 cut(s) 555, 588, 978, 1857
Eco88I CYCGRG 1 cut(s) 1381
EcoO109I RGGNCCY 1 cut(s) 241
EcoRI GAATTC 1 cut(s) 1450
EcoT14I CCWWGG 3 cut(s) 303, 378, 784
EcoT22I ATGCAT 2 cut(s) 565, 1869
EcoT38I GRGCYC 2 cut(s) 585, 1772
ErhI CCWWGG 3 cut(s) 303, 378, 784
Esp3I CGTCTC 2 cut(s) 207, 1592
FaeI CATG 3 cut(s) 881, 1706, 1871
FalI AAGNNNNNCTT 2 cut(s) 412, 444
FaqI GGGAC 1 cut(s) 1106
FatI CATG 3 cut(s) 877, 1702, 1867
FauI CCCGC 1 cut(s) 1759
FblI GTMKAC 1 cut(s) 932
Fnu4HI GCNGC 8 cut(s) 35, 38, 375, 552, 908, 990, 1190, 1667
FokI GGATG 9 cut(s) 35, 395, 476, 1111, 1238, 1355, 1505, 1768, 1808
FriOI GRGCYC 2 cut(s) 585, 1772
Fsp4HI GCNGC 8 cut(s) 35, 38, 375, 552, 908, 990, 1190, 1667
FspBI CTAG 8 cut(s) 311, 1305, 1377, 1404, 1479, 1527, 1554, 1629
GlaI GCGC 1 cut(s) 226
GluI GCNGC 8 cut(s) 35, 38, 375, 552, 908, 990, 1190, 1667
GsaI CCCAGC 3 cut(s) 456, 588, 1732
GsuI CTGGAG 2 cut(s) 528, 1704
HaeIII GGCC 6 cut(s) 5, 180, 366, 484, 970, 1770
HapII CCGG 6 cut(s) 116, 160, 286, 447, 971, 1185
HgaI GACGC 3 cut(s) 189, 202, 801
HhaI GCGC 1 cut(s) 227
Hin1I GRCGYC 1 cut(s) 1601
Hin1II CATG 3 cut(s) 881, 1706, 1871
Hin6I GCGC 1 cut(s) 225
HinP1I GCGC 1 cut(s) 225
HincII GTYRAC 1 cut(s) 390
HindII GTYRAC 1 cut(s) 390
HpaI GTTAAC 1 cut(s) 390
HpaII CCGG 6 cut(s) 116, 160, 286, 447, 971, 1185
HphI GGTGA 3 cut(s) 138, 953, 962
Hpy166II GTNNAC 6 cut(s) 331, 390, 933, 1391, 1541, 1700
Hpy188III TCNNGA 9 cut(s) 16, 116, 251, 311, 518, 878, 1010, 1319, 1442
Hpy8I GTNNAC 6 cut(s) 331, 390, 933, 1391, 1541, 1700
Hpy99I CGWCG 2 cut(s) 22, 76
HpyAV CCTTC 6 cut(s) 120, 463, 530, 921, 1216, 1786
HpyCH4III ACNGT 8 cut(s) 394, 1048, 1075, 1200, 1219, 1423, 1573, 1714
HpyCH4IV ACGT 2 cut(s) 625, 1601
HpyF10VI GCNNNNNNNGC 8 cut(s) 46, 171, 560, 580, 667, 1244, 1479, 1629
HpyF3I CTNAG 9 cut(s) 188, 206, 399, 432, 638, 725, 800, 816, 887
HpySE526I ACGT 2 cut(s) 625, 1601
Hsp92I GRCGYC 1 cut(s) 1601
Hsp92II CATG 3 cut(s) 881, 1706, 1871
HspAI GCGC 1 cut(s) 225
Kpn2I TCCGGA 1 cut(s) 115
KroI GCCGGC 1 cut(s) 970
KroNI GCCGGC 1 cut(s) 972
KspAI GTTAAC 1 cut(s) 390
LguI GCTCTTC 4 cut(s) 564, 651, 1414, 1564
LmnI GCTCC 5 cut(s) 133, 478, 1321, 1444, 1685
Lsp1109I GCAGC 8 cut(s) 24, 46, 386, 538, 919, 976, 1201, 1678
LweI GCATC 6 cut(s) 13, 538, 572, 659, 1753, 1854
MaeI CTAG 8 cut(s) 311, 1305, 1377, 1404, 1479, 1527, 1554, 1629
MaeII ACGT 2 cut(s) 625, 1601
MaeIII GTNAC 5 cut(s) 144, 1456, 1606, 1655, 1857
MbiI CCGCTC 1 cut(s) 948
MboII GAAGA 9 cut(s) 131, 208, 581, 668, 1295, 1401, 1551, 1793, 1850
MfeI CAATTG 1 cut(s) 681
MflI RGATCY 4 cut(s) 42, 139, 1082, 1672
MhlI GDGCHC 4 cut(s) 585, 1393, 1543, 1772
MluCI AATT 5 cut(s) 262, 681, 1450, 1483, 1689
MlyI GAGTC 2 cut(s) 839, 1088
MmeI TCCRAC 2 cut(s) 617, 1194
Mph1103I ATGCAT 2 cut(s) 565, 1869
MroI TCCGGA 1 cut(s) 115
MroNI GCCGGC 1 cut(s) 970
MroXI GAANNNNTTC 1 cut(s) 1002
MseI TTAA 2 cut(s) 389, 407
MspA1I CMGCKG 4 cut(s) 37, 923, 989, 1334
MspI CCGG 6 cut(s) 116, 160, 286, 447, 971, 1185
MspR9I CCNGG 2 cut(s) 448, 1186
MunI CAATTG 1 cut(s) 681
Mva1269I GAATGC 2 cut(s) 376, 565
MwoI GCNNNNNNNGC 8 cut(s) 46, 171, 560, 580, 667, 1244, 1479, 1629
NaeI GCCGGC 1 cut(s) 972
NciI CCSGG 2 cut(s) 448, 1186
NgoMIV GCCGGC 1 cut(s) 970
NheI GCTAGC 2 cut(s) 1478, 1628
NlaIII CATG 3 cut(s) 881, 1706, 1871
NlaIV GGNNCC 5 cut(s) 141, 284, 474, 1317, 1770
NmeAIII GCCGAG 1 cut(s) 460
NmuCI GTSAC 2 cut(s) 144, 1857
NsiI ATGCAT 2 cut(s) 565, 1869
NspV TTCGAA 1 cut(s) 52
PaeR7I CTCGAG 1 cut(s) 1381
PagI TCATGA 1 cut(s) 877
PciSI GCTCTTC 4 cut(s) 564, 651, 1414, 1564
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PctI GAATGC 2 cut(s) 376, 565
PdiI GCCGGC 1 cut(s) 972
PdmI GAANNNNTTC 1 cut(s) 1002
PfeI GAWTC 8 cut(s) 353, 514, 953, 1013, 1205, 1349, 1396, 1499
Pfl23II CGTACG 1 cut(s) 75
PkrI GCNGC 8 cut(s) 36, 39, 376, 553, 909, 991, 1191, 1668
PleI GAGTC 2 cut(s) 838, 1088
PpsI GAGTC 2 cut(s) 838, 1088
PpuMI RGGWCCY 1 cut(s) 241
Psp5II RGGWCCY 1 cut(s) 241
PspFI CCCAGC 3 cut(s) 452, 584, 1728
PspLI CGTACG 1 cut(s) 75
PspN4I GGNNCC 5 cut(s) 141, 284, 474, 1317, 1770
PspOMI GGGCCC 1 cut(s) 1768
PspPI GGNCC 4 cut(s) 241, 331, 1768, 1769
PspPPI RGGWCCY 1 cut(s) 241
PspXI VCTCGAGB 1 cut(s) 1381
PstI CTGCAG 1 cut(s) 42
PstNI CAGNNNCTG 1 cut(s) 1442
PsuI RGATCY 4 cut(s) 42, 139, 1082, 1672
PvuII CAGCTG 4 cut(s) 37, 923, 989, 1334
RsaI GTAC 5 cut(s) 77, 155, 862, 1123, 1923
RsaNI GTAC 5 cut(s) 76, 154, 861, 1122, 1922
SapI GCTCTTC 4 cut(s) 564, 651, 1414, 1564
SaqAI TTAA 2 cut(s) 389, 407
SatI GCNGC 8 cut(s) 35, 38, 375, 552, 908, 990, 1190, 1667
Sau96I GGNCC 4 cut(s) 241, 331, 1768, 1769
ScaI AGTACT 1 cut(s) 862
SchI GAGTC 2 cut(s) 839, 1088
ScrFI CCNGG 2 cut(s) 448, 1186
SduI GDGCHC 4 cut(s) 585, 1393, 1543, 1772
SfaNI GCATC 6 cut(s) 13, 538, 572, 659, 1753, 1854
SfcI CTRYAG 7 cut(s) 38, 603, 690, 765, 1044, 1215, 1710
Sfr274I CTCGAG 1 cut(s) 1381
SfuI TTCGAA 1 cut(s) 52
SinI GGWCC 2 cut(s) 241, 331
SlaI CTCGAG 1 cut(s) 1381
SmlI CTYRAG 6 cut(s) 296, 936, 1008, 1381, 1531, 1886
SmoI CTYRAG 6 cut(s) 296, 936, 1008, 1381, 1531, 1886
Sse9I AATT 5 cut(s) 262, 681, 1450, 1483, 1689
SsiI CCGC 4 cut(s) 149, 268, 948, 1766
SspMI CTAG 8 cut(s) 311, 1305, 1377, 1404, 1479, 1527, 1554, 1629
StyD4I CCNGG 2 cut(s) 446, 1184
StyI CCWWGG 3 cut(s) 303, 378, 784
TaaI ACNGT 8 cut(s) 394, 1048, 1075, 1200, 1219, 1423, 1573, 1714
TaiI ACGT 2 cut(s) 628, 1604
TaqI TCGA 4 cut(s) 52, 1097, 1382, 1575
TasI AATT 5 cut(s) 262, 681, 1450, 1483, 1689
TatI WGTACW 3 cut(s) 860, 1121, 1921
TfiI GAWTC 8 cut(s) 353, 514, 953, 1013, 1205, 1349, 1396, 1499
Tru1I TTAA 2 cut(s) 389, 407
Tru9I TTAA 2 cut(s) 389, 407
TscAI CASTG 1 cut(s) 1224
TseFI GTSAC 2 cut(s) 144, 1857
TseI GCWGC 8 cut(s) 34, 37, 374, 551, 907, 989, 1189, 1666
Tsp45I GTSAC 2 cut(s) 144, 1857
TspDTI ATGAA 3 cut(s) 366, 894, 1794
TspGWI ACGGA 2 cut(s) 35, 132
TspRI CASTG 1 cut(s) 1224
VneI GTGCAC 2 cut(s) 1389, 1539
VpaK11BI GGWCC 2 cut(s) 241, 331
XapI RAATTY 1 cut(s) 1450
XbaI TCTAGA 1 cut(s) 310
XcmI CCANNNNNNNNNTGG 1 cut(s) 133
XhoI CTCGAG 1 cut(s) 1381
XmiI GTMKAC 1 cut(s) 932
XmnI GAANNNNTTC 1 cut(s) 1002
XspI CTAG 8 cut(s) 311, 1305, 1377, 1404, 1479, 1527, 1554, 1629
ZraI GACGTC 1 cut(s) 1602
ZrmI AGTACT 1 cut(s) 862
Zsp2I ATGCAT 2 cut(s) 565, 1869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.