No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07640 |
| fragaria_vesca | FvH4_6g40230 |
| malus_domestica | MD17G1121200.v1.1 MD17G1122600.v1.1 |
| prunus_persica | Prupe.3G192700_v2.0.a1 Prupe.3G192700_v2.0.a1 Prupe.3G192700_v2.0.a1 |
| pyrus_communis | pycom17g11160 pycom17g11210 pycom17g11290 pycom17g11320 pycom17g11390 pycom17g11430 |
| rosa_chinensis | RchiOBHm_Chr2g0155251 |
| rosa_laevigata | RLG00000020830 |
| rosa_multiflora | Rmu_sc0012066.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00093830 |
| rosa_rugosa | Rorug02G0446300 |
| rosa_samantha | Rh2AG512800 Rh2BG523400 Rh2CG497800 Rh2DG533100 |
| rosa_wichuraiana | Rw2G042130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1413 |
| Acc65I | GGTACC | 1 cut(s) | 655 |
| AccB1I | GGYRCC | 2 cut(s) | 332, 655 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 577 |
| AccI | GTMKAC | 2 cut(s) | 219, 625 |
| AccII | CGCG | 1 cut(s) | 779 |
| AciI | CCGC | 5 cut(s) | 895, 1052, 1068, 1102, 1277 |
| AclWI | GGATC | 3 cut(s) | 13, 203, 995 |
| AcsI | RAATTY | 2 cut(s) | 1105, 1187 |
| AcuI | CTGAAG | 1 cut(s) | 1304 |
| AdeI | CACNNNGTG | 1 cut(s) | 65 |
| AfaI | GTAC | 1 cut(s) | 657 |
| AfeI | AGCGCT | 1 cut(s) | 553 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 142, 577, 793 |
| AflIII | ACRYGT | 1 cut(s) | 202 |
| AgsI | TTSAA | 5 cut(s) | 374, 1193, 1339, 1444, 1458 |
| AjnI | CCWGG | 1 cut(s) | 1005 |
| AleI | CACNNNNGTG | 1 cut(s) | 786 |
| Alw21I | GWGCWC | 2 cut(s) | 527, 951 |
| Alw26I | GTCTC | 3 cut(s) | 641, 849, 1455 |
| AlwI | GGATC | 3 cut(s) | 13, 203, 995 |
| Aor51HI | AGCGCT | 1 cut(s) | 553 |
| AoxI | GGCC | 1 cut(s) | 446 |
| ApeKI | GCWGC | 5 cut(s) | 188, 301, 343, 662, 1030 |
| ApoI | RAATTY | 2 cut(s) | 1105, 1187 |
| AseI | ATTAAT | 1 cut(s) | 1074 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1398 |
| Asp718I | GGTACC | 1 cut(s) | 655 |
| AspLEI | GCGC | 4 cut(s) | 511, 554, 779, 781 |
| AspS9I | GGNCC | 1 cut(s) | 1327 |
| AsuHPI | GGTGA | 1 cut(s) | 115 |
| AsuII | TTCGAA | 2 cut(s) | 616, 833 |
| AvaII | GGWCC | 1 cut(s) | 1327 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 639, 672 |
| BanI | GGYRCC | 2 cut(s) | 332, 655 |
| BanII | GRGCYC | 1 cut(s) | 951 |
| BauI | CACGAG | 1 cut(s) | 60 |
| Bbv12I | GWGCWC | 2 cut(s) | 527, 951 |
| BbvCI | CCTCAGC | 1 cut(s) | 1114 |
| BbvI | GCAGC | 5 cut(s) | 200, 313, 330, 649, 1017 |
| BccI | CCATC | 5 cut(s) | 17, 236, 304, 887, 1288 |
| BciT130I | CCWGG | 1 cut(s) | 1007 |
| BcoDI | GTCTC | 3 cut(s) | 641, 849, 1455 |
| BfaI | CTAG | 3 cut(s) | 1061, 1085, 1145 |
| BfmI | CTRYAG | 5 cut(s) | 186, 213, 547, 918, 1122 |
| BfoI | RGCGCY | 1 cut(s) | 555 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 884 |
| BglII | AGATCT | 1 cut(s) | 405 |
| BisI | GCNGC | 5 cut(s) | 189, 302, 344, 663, 1031 |
| BlsI | GCNGC | 5 cut(s) | 190, 303, 345, 664, 1032 |
| Bme1390I | CCNGG | 1 cut(s) | 1007 |
| Bme18I | GGWCC | 1 cut(s) | 1327 |
| BmgT120I | GGNCC | 1 cut(s) | 1327 |
| BmiI | GGNNCC | 4 cut(s) | 164, 334, 657, 1509 |
| BmrFI | CCNGG | 1 cut(s) | 1007 |
| BmsI | GCATC | 2 cut(s) | 315, 865 |
| BoxI | GACNNNNGTC | 1 cut(s) | 73 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1114 |
| Bpu14I | TTCGAA | 2 cut(s) | 616, 833 |
| BsaJI | CCNNGG | 4 cut(s) | 381, 1005, 1006, 1511 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1499, 1529 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 142, 577, 793 |
| BseBI | CCWGG | 1 cut(s) | 1007 |
| BseDI | CCNNGG | 4 cut(s) | 381, 1005, 1006, 1511 |
| BseGI | GGATG | 4 cut(s) | 377, 1109, 1151, 1280 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 142, 577, 793 |
| BseMII | CTCAG | 4 cut(s) | 636, 842, 873, 1128 |
| BsePI | GCGCGC | 1 cut(s) | 777 |
| BseXI | GCAGC | 5 cut(s) | 200, 313, 330, 649, 1017 |
| BsgI | GTGCAG | 1 cut(s) | 648 |
| Bsh1236I | CGCG | 1 cut(s) | 779 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1504 |
| BshFI | GGCC | 1 cut(s) | 448 |
| BshNI | GGYRCC | 2 cut(s) | 332, 655 |
| BsiEI | CGRYCG | 1 cut(s) | 1504 |
| BsiHKAI | GWGCWC | 2 cut(s) | 527, 951 |
| BslFI | GGGAC | 1 cut(s) | 371 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 142, 577, 793 |
| BsmAI | GTCTC | 3 cut(s) | 641, 849, 1455 |
| BsmFI | GGGAC | 1 cut(s) | 371 |
| BsmI | GAATGC | 2 cut(s) | 369, 610 |
| BsnI | GGCC | 1 cut(s) | 448 |
| Bsp119I | TTCGAA | 2 cut(s) | 616, 833 |
| Bsp1286I | GDGCHC | 2 cut(s) | 527, 951 |
| Bsp143I | GATC | 7 cut(s) | 18, 195, 405, 535, 1000, 1467, 1501 |
| Bsp19I | CCATGG | 2 cut(s) | 381, 1511 |
| BspACI | CCGC | 5 cut(s) | 895, 1052, 1068, 1102, 1277 |
| BspANI | GGCC | 1 cut(s) | 448 |
| BspCNI | CTCAG | 4 cut(s) | 637, 843, 872, 1127 |
| BspFNI | CGCG | 1 cut(s) | 779 |
| BspHI | TCATGA | 2 cut(s) | 15, 1297 |
| BspLI | GGNNCC | 4 cut(s) | 164, 334, 657, 1509 |
| BspMAI | CTGCAG | 1 cut(s) | 190 |
| BspPI | GGATC | 3 cut(s) | 13, 203, 995 |
| BspT104I | TTCGAA | 2 cut(s) | 616, 833 |
| BspT107I | GGYRCC | 2 cut(s) | 332, 655 |
| BssECI | CCNNGG | 4 cut(s) | 381, 1005, 1006, 1511 |
| BssHII | GCGCGC | 1 cut(s) | 777 |
| BssMI | GATC | 7 cut(s) | 18, 195, 405, 535, 1000, 1467, 1501 |
| BssSI | CACGAG | 1 cut(s) | 60 |
| BssT1I | CCWWGG | 2 cut(s) | 381, 1511 |
| Bst2BI | CACGAG | 1 cut(s) | 60 |
| Bst2UI | CCWGG | 1 cut(s) | 1007 |
| Bst4CI | ACNGT | 3 cut(s) | 533, 919, 1126 |
| Bst6I | CTCTTC | 4 cut(s) | 89, 266, 415, 1389 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 671 |
| BstBI | TTCGAA | 2 cut(s) | 616, 833 |
| BstC8I | GCNNGC | 4 cut(s) | 779, 1066, 1312, 1435 |
| BstDEI | CTNAG | 7 cut(s) | 459, 483, 588, 645, 851, 859, 1114 |
| BstDSI | CCRYGG | 2 cut(s) | 381, 1511 |
| BstF5I | GGATG | 4 cut(s) | 377, 1109, 1151, 1280 |
| BstFNI | CGCG | 1 cut(s) | 779 |
| BstH2I | RGCGCY | 1 cut(s) | 555 |
| BstHHI | GCGC | 4 cut(s) | 511, 554, 779, 781 |
| BstKTI | GATC | 7 cut(s) | 21, 198, 408, 538, 1003, 1470, 1504 |
| BstMAI | GTCTC | 3 cut(s) | 641, 849, 1455 |
| BstMBI | GATC | 7 cut(s) | 18, 195, 405, 535, 1000, 1467, 1501 |
| BstMCI | CGRYCG | 1 cut(s) | 1504 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 287, 671, 884, 1094, 1285, 1372 |
| BstNI | CCWGG | 1 cut(s) | 1007 |
| BstNSI | RCATGY | 1 cut(s) | 206 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 73 |
| BstSCI | CCNGG | 1 cut(s) | 1005 |
| BstSFI | CTRYAG | 5 cut(s) | 186, 213, 547, 918, 1122 |
| BstUI | CGCG | 1 cut(s) | 779 |
| BstV1I | GCAGC | 5 cut(s) | 200, 313, 330, 649, 1017 |
| BstX2I | RGATCY | 1 cut(s) | 405 |
| BstYI | RGATCY | 1 cut(s) | 405 |
| BsuRI | GGCC | 1 cut(s) | 448 |
| BtgI | CCRYGG | 2 cut(s) | 381, 1511 |
| BtgZI | GCGATG | 1 cut(s) | 888 |
| BtsCI | GGATG | 4 cut(s) | 377, 1109, 1151, 1280 |
| BtsIMutI | CAGTG | 1 cut(s) | 538 |
| Cac8I | GCNNGC | 4 cut(s) | 779, 1066, 1312, 1435 |
| CciI | TCATGA | 2 cut(s) | 15, 1297 |
| CfoI | GCGC | 4 cut(s) | 511, 554, 779, 781 |
| Cfr13I | GGNCC | 1 cut(s) | 1327 |
| Csp6I | GTAC | 1 cut(s) | 656 |
| CviAII | CATG | 6 cut(s) | 16, 203, 382, 1298, 1473, 1512 |
| CviQI | GTAC | 1 cut(s) | 656 |
| DdeI | CTNAG | 7 cut(s) | 459, 483, 588, 645, 851, 859, 1114 |
| DpnI | GATC | 7 cut(s) | 20, 197, 407, 537, 1002, 1469, 1503 |
| DpnII | GATC | 7 cut(s) | 18, 195, 405, 535, 1000, 1467, 1501 |
| DraIII | CACNNNGTG | 1 cut(s) | 65 |
| Eam1104I | CTCTTC | 4 cut(s) | 89, 266, 415, 1389 |
| EarI | CTCTTC | 4 cut(s) | 89, 266, 415, 1389 |
| EciI | GGCGGA | 2 cut(s) | 884, 1117 |
| Ecl136II | GAGCTC | 1 cut(s) | 949 |
| Eco130I | CCWWGG | 2 cut(s) | 381, 1511 |
| Eco24I | GRGCYC | 1 cut(s) | 951 |
| Eco47I | GGWCC | 1 cut(s) | 1327 |
| Eco47III | AGCGCT | 1 cut(s) | 553 |
| Eco53kI | GAGCTC | 1 cut(s) | 949 |
| Eco57I | CTGAAG | 1 cut(s) | 1304 |
| EcoICRI | GAGCTC | 1 cut(s) | 949 |
| EcoRI | GAATTC | 1 cut(s) | 1105 |
| EcoRII | CCWGG | 1 cut(s) | 1005 |
| EcoT14I | CCWWGG | 2 cut(s) | 381, 1511 |
| EcoT38I | GRGCYC | 1 cut(s) | 951 |
| ErhI | CCWWGG | 2 cut(s) | 381, 1511 |
| FaeI | CATG | 6 cut(s) | 19, 206, 385, 1301, 1476, 1515 |
| FaqI | GGGAC | 1 cut(s) | 371 |
| FatI | CATG | 6 cut(s) | 15, 202, 381, 1297, 1472, 1511 |
| FauNDI | CATATG | 1 cut(s) | 1351 |
| FblI | GTMKAC | 2 cut(s) | 219, 625 |
| Fnu4HI | GCNGC | 5 cut(s) | 189, 302, 344, 663, 1031 |
| FokI | GGATG | 4 cut(s) | 364, 1096, 1138, 1267 |
| FriOI | GRGCYC | 1 cut(s) | 951 |
| Fsp4HI | GCNGC | 5 cut(s) | 189, 302, 344, 663, 1031 |
| FspBI | CTAG | 3 cut(s) | 1061, 1085, 1145 |
| GlaI | GCGC | 4 cut(s) | 510, 553, 778, 780 |
| GluI | GCNGC | 5 cut(s) | 189, 302, 344, 663, 1031 |
| HaeII | RGCGCY | 1 cut(s) | 555 |
| HaeIII | GGCC | 1 cut(s) | 448 |
| HhaI | GCGC | 4 cut(s) | 511, 554, 779, 781 |
| Hin1II | CATG | 6 cut(s) | 19, 206, 385, 1301, 1476, 1515 |
| Hin6I | GCGC | 4 cut(s) | 509, 552, 777, 779 |
| HinP1I | GCGC | 4 cut(s) | 509, 552, 777, 779 |
| HindIII | AAGCTT | 3 cut(s) | 461, 485, 972 |
| HphI | GGTGA | 1 cut(s) | 115 |
| Hpy166II | GTNNAC | 6 cut(s) | 68, 220, 480, 519, 626, 1205 |
| Hpy188I | TCNGA | 7 cut(s) | 111, 200, 603, 862, 1231, 1387, 1404 |
| Hpy188III | TCNNGA | 8 cut(s) | 16, 60, 631, 766, 978, 1298, 1458, 1505 |
| Hpy8I | GTNNAC | 6 cut(s) | 68, 220, 480, 519, 626, 1205 |
| HpyAV | CCTTC | 5 cut(s) | 32, 459, 795, 829, 995 |
| HpyCH4III | ACNGT | 3 cut(s) | 533, 919, 1126 |
| HpyCH4IV | ACGT | 1 cut(s) | 351 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 287, 671, 884, 1094, 1285, 1372 |
| HpyF3I | CTNAG | 7 cut(s) | 459, 483, 588, 645, 851, 859, 1114 |
| HpySE526I | ACGT | 1 cut(s) | 351 |
| Hsp92II | CATG | 6 cut(s) | 19, 206, 385, 1301, 1476, 1515 |
| HspAI | GCGC | 4 cut(s) | 509, 552, 777, 779 |
| KpnI | GGTACC | 1 cut(s) | 659 |
| Kzo9I | GATC | 7 cut(s) | 18, 195, 405, 535, 1000, 1467, 1501 |
| LmnI | GCTCC | 2 cut(s) | 946, 1507 |
| Lsp1109I | GCAGC | 5 cut(s) | 200, 313, 330, 649, 1017 |
| LweI | GCATC | 2 cut(s) | 315, 865 |
| MaeI | CTAG | 3 cut(s) | 1061, 1085, 1145 |
| MaeII | ACGT | 1 cut(s) | 351 |
| MaeIII | GTNAC | 1 cut(s) | 583 |
| MalI | GATC | 7 cut(s) | 20, 197, 407, 537, 1002, 1469, 1503 |
| MboI | GATC | 7 cut(s) | 18, 195, 405, 535, 1000, 1467, 1501 |
| MboII | GAAGA | 6 cut(s) | 106, 283, 402, 935, 1310, 1406 |
| MfeI | CAATTG | 2 cut(s) | 394, 694 |
| MflI | RGATCY | 1 cut(s) | 405 |
| MhlI | GDGCHC | 2 cut(s) | 527, 951 |
| MlyI | GAGTC | 3 cut(s) | 283, 851, 1157 |
| MmeI | TCCRAC | 1 cut(s) | 1505 |
| MnlI | CCTC | 7 cut(s) | 56, 176, 794, 856, 1007, 1012, 1123 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1398 |
| MseI | TTAA | 2 cut(s) | 1074, 1531 |
| MslI | CAYNNNNRTG | 2 cut(s) | 14, 786 |
| MspA1I | CMGCKG | 1 cut(s) | 662 |
| MspR9I | CCNGG | 1 cut(s) | 1007 |
| MunI | CAATTG | 2 cut(s) | 394, 694 |
| Mva1269I | GAATGC | 2 cut(s) | 369, 610 |
| MvaI | CCWGG | 1 cut(s) | 1007 |
| MvnI | CGCG | 1 cut(s) | 779 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 287, 671, 884, 1094, 1285, 1372 |
| NcoI | CCATGG | 2 cut(s) | 381, 1511 |
| NdeI | CATATG | 1 cut(s) | 1351 |
| NdeII | GATC | 7 cut(s) | 18, 195, 405, 535, 1000, 1467, 1501 |
| NlaIII | CATG | 6 cut(s) | 19, 206, 385, 1301, 1476, 1515 |
| NlaIV | GGNNCC | 4 cut(s) | 164, 334, 657, 1509 |
| NmeAIII | GCCGAG | 1 cut(s) | 863 |
| NspI | RCATGY | 1 cut(s) | 206 |
| NspV | TTCGAA | 2 cut(s) | 616, 833 |
| OliI | CACNNNNGTG | 1 cut(s) | 786 |
| PagI | TCATGA | 2 cut(s) | 15, 1297 |
| PasI | CCCWGGG | 1 cut(s) | 1006 |
| PauI | GCGCGC | 1 cut(s) | 777 |
| PciI | ACATGT | 1 cut(s) | 202 |
| PctI | GAATGC | 2 cut(s) | 369, 610 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1398 |
| PfeI | GAWTC | 7 cut(s) | 112, 338, 386, 957, 981, 1291, 1477 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 577 |
| PkrI | GCNGC | 5 cut(s) | 190, 303, 345, 664, 1032 |
| Ple19I | CGATCG | 1 cut(s) | 1504 |
| PleI | GAGTC | 3 cut(s) | 282, 851, 1156 |
| PpsI | GAGTC | 3 cut(s) | 282, 851, 1156 |
| PscI | ACATGT | 1 cut(s) | 202 |
| PshAI | GACNNNNGTC | 1 cut(s) | 73 |
| PshBI | ATTAAT | 1 cut(s) | 1074 |
| PsiI | TTATAA | 1 cut(s) | 1413 |
| Psp124BI | GAGCTC | 1 cut(s) | 951 |
| Psp6I | CCWGG | 1 cut(s) | 1005 |
| PspGI | CCWGG | 1 cut(s) | 1005 |
| PspN4I | GGNNCC | 4 cut(s) | 164, 334, 657, 1509 |
| PspPI | GGNCC | 1 cut(s) | 1327 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1041, 1073 |
| PstI | CTGCAG | 1 cut(s) | 190 |
| PsuI | RGATCY | 1 cut(s) | 405 |
| PteI | GCGCGC | 1 cut(s) | 777 |
| PvuI | CGATCG | 1 cut(s) | 1504 |
| PvuII | CAGCTG | 1 cut(s) | 662 |
| RsaI | GTAC | 1 cut(s) | 657 |
| RsaNI | GTAC | 1 cut(s) | 656 |
| RseI | CAYNNNNRTG | 2 cut(s) | 14, 786 |
| SacI | GAGCTC | 1 cut(s) | 951 |
| SaqAI | TTAA | 2 cut(s) | 1074, 1531 |
| SatI | GCNGC | 5 cut(s) | 189, 302, 344, 663, 1031 |
| Sau3AI | GATC | 7 cut(s) | 18, 195, 405, 535, 1000, 1467, 1501 |
| Sau96I | GGNCC | 1 cut(s) | 1327 |
| SchI | GAGTC | 3 cut(s) | 283, 851, 1157 |
| ScrFI | CCNGG | 1 cut(s) | 1007 |
| SduI | GDGCHC | 2 cut(s) | 527, 951 |
| SfaNI | GCATC | 2 cut(s) | 315, 865 |
| SfcI | CTRYAG | 5 cut(s) | 186, 213, 547, 918, 1122 |
| SfuI | TTCGAA | 2 cut(s) | 616, 833 |
| SinI | GGWCC | 1 cut(s) | 1327 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 14, 786 |
| SsiI | CCGC | 5 cut(s) | 895, 1052, 1068, 1102, 1277 |
| SspI | AATATT | 2 cut(s) | 51, 613 |
| SspMI | CTAG | 3 cut(s) | 1061, 1085, 1145 |
| SstI | GAGCTC | 1 cut(s) | 951 |
| StyD4I | CCNGG | 1 cut(s) | 1005 |
| StyI | CCWWGG | 2 cut(s) | 381, 1511 |
| TaaI | ACNGT | 3 cut(s) | 533, 919, 1126 |
| TaiI | ACGT | 1 cut(s) | 354 |
| TaqI | TCGA | 6 cut(s) | 261, 413, 616, 833, 933, 999 |
| TfiI | GAWTC | 7 cut(s) | 112, 338, 386, 957, 981, 1291, 1477 |
| Tru1I | TTAA | 2 cut(s) | 1074, 1531 |
| Tru9I | TTAA | 2 cut(s) | 1074, 1531 |
| TscAI | CASTG | 1 cut(s) | 538 |
| TseI | GCWGC | 5 cut(s) | 188, 301, 343, 662, 1030 |
| TspDTI | ATGAA | 6 cut(s) | 171, 1062, 1092, 1098, 1283, 1314 |
| TspGWI | ACGGA | 2 cut(s) | 776, 1319 |
| TspRI | CASTG | 1 cut(s) | 538 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 577 |
| VpaK11BI | GGWCC | 1 cut(s) | 1327 |
| VspI | ATTAAT | 1 cut(s) | 1074 |
| XapI | RAATTY | 2 cut(s) | 1105, 1187 |
| XceI | RCATGY | 1 cut(s) | 206 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 29 |
| XmiI | GTMKAC | 2 cut(s) | 219, 625 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1398 |
| XspI | CTAG | 3 cut(s) | 1061, 1085, 1145 |