pycom17g11290

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
8830420 .. 8834084
3665 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g11290.4

Sequence Viewer

Length: 1533 bp
ATGTTCTCCATCATCATGATCCATATTCTTTATGGGGAAGGAATACAAATATTACTTTCACGAGGTGGACAAGGGTCAAACAAGATAGAGTGGAAGAGAAATACTAATCTGATTCACTTATTCACCTACGCAGTCCAAAGTAAGGAGTATGCTGTAATATGGTTCCTCACAAGTGATAGTTCATCTGCAGCTTGGATCAGACATGTTTGCTCTGTAGTAGACCAGATGACAAACCTATTTGATGGTGTGCCAAAATGTTTCGATTATTGGAAGAGTCTTGCTGATTTAGCACTCTTTTTGCAGCATAAGATGGCAATTTATATGATGCTCGGTGCCGATTCGCTGCTTTACGTCAGGGACTATCAAGGCATTCAATCATCCATGGAATCTCTCAATTGGTGGGAGATCTCTTCGACATTTTTTGGTGTATTGTGGAACAACAAGTGGCCTTCACTCACTAAGCTTGGGGTATTCTTGTTCACTAAGCTTTGGGTCTGCAATTTATGGGCGCATTTGTTTACGAGCACCAACAGTGATCTCATTGTCTGTAGCGCTACAAGTGGGATTGACCACCCAATGGGAGTTACTAAGCCTAAAAATCTGAATGCCAATATTCGAAGTTGTCTACTCTTGACCACAATTACTGAGACTTGGGTACCAGCTGCACAAAATGCAGAAAACCATTTGGACATCAATTGTCATTCTTTTGGGGAGTTGGTGGTCGGTTATGCAACAAAGCTGATTGTTCTTTTGCTCAATGCTATCAAGATTAGTTGCGCGCACCTCCGTGCATTGGTTAGAAGGACGGGCAGAAAGAAAATCAAGGTTGGTTCGAAGGTAGTGTTTCTGCTGAGAGACTCAGAGGGCTTCGGCGATGCCATCTCGGCTACTTTCCGCCCAAGTCCAAGCAATTATACTGTAGAAGAAAGTTTCGAGCTTTCTTTGGAGCTCTATGGAATCCAAAATTGCAAAGCTTCTGGAATCCTTCGCCACTTCCTCGATCCCCAGGGTCAATATGAGGTGTCTGTGCTGCTTATGGAATACTATGAACCGCCAATACTAGCCTGCGGTATTAATGAAGTTCTAGCACAATTAGCAGGGCGGAATTCATCCTCAGCTTCTACAGTCGTTGCCCTGTTTTTCCTAGAGTCATCCAAGCTAAAGGGGGAAAGTAAATCTGCAACAAAATTTGAAAGCAAATGTTCACTTTATGGTATAGAGATTGGTTCAGAAACAGCCATAAGCAAGGCTATGGCAACCAAAACCCAGAAGCCACCGCCATCCTTGCAGATTCATCATGAACATTTGGCTTGCTTTCTTCAGTTGGTCCGTATTTTGAAGTTGCCAACATATGTTCTTATCAAGCAAATAGGGCAACACATTTCTGATAAAGAAGAGTTTCAGATACTTTATAAGATTGGAGAACTTTTAGCAAGCACTTTGAACCTTTCCTTTTCAAGAGACAAGATCACATGGAATCCAACAAGAAAATCAAAAGACGATCGGGAGCCATGGTGTGCATTATATGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

511

Amino Acids

57.35

Weight (kDa)

8.57

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1413
Acc65I GGTACC 1 cut(s) 655
AccB1I GGYRCC 2 cut(s) 332, 655
AccB7I CCANNNNNTGG 1 cut(s) 577
AccI GTMKAC 2 cut(s) 219, 625
AccII CGCG 1 cut(s) 779
AciI CCGC 5 cut(s) 895, 1052, 1068, 1102, 1277
AclWI GGATC 3 cut(s) 13, 203, 995
AcsI RAATTY 2 cut(s) 1105, 1187
AcuI CTGAAG 1 cut(s) 1304
AdeI CACNNNGTG 1 cut(s) 65
AfaI GTAC 1 cut(s) 657
AfeI AGCGCT 1 cut(s) 553
AfiI CCNNNNNNNGG 3 cut(s) 142, 577, 793
AflIII ACRYGT 1 cut(s) 202
AgsI TTSAA 5 cut(s) 374, 1193, 1339, 1444, 1458
AjnI CCWGG 1 cut(s) 1005
AleI CACNNNNGTG 1 cut(s) 786
Alw21I GWGCWC 2 cut(s) 527, 951
Alw26I GTCTC 3 cut(s) 641, 849, 1455
AlwI GGATC 3 cut(s) 13, 203, 995
Aor51HI AGCGCT 1 cut(s) 553
AoxI GGCC 1 cut(s) 446
ApeKI GCWGC 5 cut(s) 188, 301, 343, 662, 1030
ApoI RAATTY 2 cut(s) 1105, 1187
AseI ATTAAT 1 cut(s) 1074
Asp700I GAANNNNTTC 1 cut(s) 1398
Asp718I GGTACC 1 cut(s) 655
AspLEI GCGC 4 cut(s) 511, 554, 779, 781
AspS9I GGNCC 1 cut(s) 1327
AsuHPI GGTGA 1 cut(s) 115
AsuII TTCGAA 2 cut(s) 616, 833
AvaII GGWCC 1 cut(s) 1327
BaeI ACNNNNGTAYC 2 cut(s) 639, 672
BanI GGYRCC 2 cut(s) 332, 655
BanII GRGCYC 1 cut(s) 951
BauI CACGAG 1 cut(s) 60
Bbv12I GWGCWC 2 cut(s) 527, 951
BbvCI CCTCAGC 1 cut(s) 1114
BbvI GCAGC 5 cut(s) 200, 313, 330, 649, 1017
BccI CCATC 5 cut(s) 17, 236, 304, 887, 1288
BciT130I CCWGG 1 cut(s) 1007
BcoDI GTCTC 3 cut(s) 641, 849, 1455
BfaI CTAG 3 cut(s) 1061, 1085, 1145
BfmI CTRYAG 5 cut(s) 186, 213, 547, 918, 1122
BfoI RGCGCY 1 cut(s) 555
BglI GCCNNNNNGGC 1 cut(s) 884
BglII AGATCT 1 cut(s) 405
BisI GCNGC 5 cut(s) 189, 302, 344, 663, 1031
BlsI GCNGC 5 cut(s) 190, 303, 345, 664, 1032
Bme1390I CCNGG 1 cut(s) 1007
Bme18I GGWCC 1 cut(s) 1327
BmgT120I GGNCC 1 cut(s) 1327
BmiI GGNNCC 4 cut(s) 164, 334, 657, 1509
BmrFI CCNGG 1 cut(s) 1007
BmsI GCATC 2 cut(s) 315, 865
BoxI GACNNNNGTC 1 cut(s) 73
Bpu10I CCTNAGC 1 cut(s) 1114
Bpu14I TTCGAA 2 cut(s) 616, 833
BsaJI CCNNGG 4 cut(s) 381, 1005, 1006, 1511
BsaXI ACNNNNNCTCC 2 cut(s) 1499, 1529
Bsc4I CCNNNNNNNGG 3 cut(s) 142, 577, 793
BseBI CCWGG 1 cut(s) 1007
BseDI CCNNGG 4 cut(s) 381, 1005, 1006, 1511
BseGI GGATG 4 cut(s) 377, 1109, 1151, 1280
BseLI CCNNNNNNNGG 3 cut(s) 142, 577, 793
BseMII CTCAG 4 cut(s) 636, 842, 873, 1128
BsePI GCGCGC 1 cut(s) 777
BseXI GCAGC 5 cut(s) 200, 313, 330, 649, 1017
BsgI GTGCAG 1 cut(s) 648
Bsh1236I CGCG 1 cut(s) 779
Bsh1285I CGRYCG 1 cut(s) 1504
BshFI GGCC 1 cut(s) 448
BshNI GGYRCC 2 cut(s) 332, 655
BsiEI CGRYCG 1 cut(s) 1504
BsiHKAI GWGCWC 2 cut(s) 527, 951
BslFI GGGAC 1 cut(s) 371
BslI CCNNNNNNNGG 3 cut(s) 142, 577, 793
BsmAI GTCTC 3 cut(s) 641, 849, 1455
BsmFI GGGAC 1 cut(s) 371
BsmI GAATGC 2 cut(s) 369, 610
BsnI GGCC 1 cut(s) 448
Bsp119I TTCGAA 2 cut(s) 616, 833
Bsp1286I GDGCHC 2 cut(s) 527, 951
Bsp143I GATC 7 cut(s) 18, 195, 405, 535, 1000, 1467, 1501
Bsp19I CCATGG 2 cut(s) 381, 1511
BspACI CCGC 5 cut(s) 895, 1052, 1068, 1102, 1277
BspANI GGCC 1 cut(s) 448
BspCNI CTCAG 4 cut(s) 637, 843, 872, 1127
BspFNI CGCG 1 cut(s) 779
BspHI TCATGA 2 cut(s) 15, 1297
BspLI GGNNCC 4 cut(s) 164, 334, 657, 1509
BspMAI CTGCAG 1 cut(s) 190
BspPI GGATC 3 cut(s) 13, 203, 995
BspT104I TTCGAA 2 cut(s) 616, 833
BspT107I GGYRCC 2 cut(s) 332, 655
BssECI CCNNGG 4 cut(s) 381, 1005, 1006, 1511
BssHII GCGCGC 1 cut(s) 777
BssMI GATC 7 cut(s) 18, 195, 405, 535, 1000, 1467, 1501
BssSI CACGAG 1 cut(s) 60
BssT1I CCWWGG 2 cut(s) 381, 1511
Bst2BI CACGAG 1 cut(s) 60
Bst2UI CCWGG 1 cut(s) 1007
Bst4CI ACNGT 3 cut(s) 533, 919, 1126
Bst6I CTCTTC 4 cut(s) 89, 266, 415, 1389
BstAPI GCANNNNNTGC 1 cut(s) 671
BstBI TTCGAA 2 cut(s) 616, 833
BstC8I GCNNGC 4 cut(s) 779, 1066, 1312, 1435
BstDEI CTNAG 7 cut(s) 459, 483, 588, 645, 851, 859, 1114
BstDSI CCRYGG 2 cut(s) 381, 1511
BstF5I GGATG 4 cut(s) 377, 1109, 1151, 1280
BstFNI CGCG 1 cut(s) 779
BstH2I RGCGCY 1 cut(s) 555
BstHHI GCGC 4 cut(s) 511, 554, 779, 781
BstKTI GATC 7 cut(s) 21, 198, 408, 538, 1003, 1470, 1504
BstMAI GTCTC 3 cut(s) 641, 849, 1455
BstMBI GATC 7 cut(s) 18, 195, 405, 535, 1000, 1467, 1501
BstMCI CGRYCG 1 cut(s) 1504
BstMWI GCNNNNNNNGC 6 cut(s) 287, 671, 884, 1094, 1285, 1372
BstNI CCWGG 1 cut(s) 1007
BstNSI RCATGY 1 cut(s) 206
BstPAI GACNNNNGTC 1 cut(s) 73
BstSCI CCNGG 1 cut(s) 1005
BstSFI CTRYAG 5 cut(s) 186, 213, 547, 918, 1122
BstUI CGCG 1 cut(s) 779
BstV1I GCAGC 5 cut(s) 200, 313, 330, 649, 1017
BstX2I RGATCY 1 cut(s) 405
BstYI RGATCY 1 cut(s) 405
BsuRI GGCC 1 cut(s) 448
BtgI CCRYGG 2 cut(s) 381, 1511
BtgZI GCGATG 1 cut(s) 888
BtsCI GGATG 4 cut(s) 377, 1109, 1151, 1280
BtsIMutI CAGTG 1 cut(s) 538
Cac8I GCNNGC 4 cut(s) 779, 1066, 1312, 1435
CciI TCATGA 2 cut(s) 15, 1297
CfoI GCGC 4 cut(s) 511, 554, 779, 781
Cfr13I GGNCC 1 cut(s) 1327
Csp6I GTAC 1 cut(s) 656
CviAII CATG 6 cut(s) 16, 203, 382, 1298, 1473, 1512
CviQI GTAC 1 cut(s) 656
DdeI CTNAG 7 cut(s) 459, 483, 588, 645, 851, 859, 1114
DpnI GATC 7 cut(s) 20, 197, 407, 537, 1002, 1469, 1503
DpnII GATC 7 cut(s) 18, 195, 405, 535, 1000, 1467, 1501
DraIII CACNNNGTG 1 cut(s) 65
Eam1104I CTCTTC 4 cut(s) 89, 266, 415, 1389
EarI CTCTTC 4 cut(s) 89, 266, 415, 1389
EciI GGCGGA 2 cut(s) 884, 1117
Ecl136II GAGCTC 1 cut(s) 949
Eco130I CCWWGG 2 cut(s) 381, 1511
Eco24I GRGCYC 1 cut(s) 951
Eco47I GGWCC 1 cut(s) 1327
Eco47III AGCGCT 1 cut(s) 553
Eco53kI GAGCTC 1 cut(s) 949
Eco57I CTGAAG 1 cut(s) 1304
EcoICRI GAGCTC 1 cut(s) 949
EcoRI GAATTC 1 cut(s) 1105
EcoRII CCWGG 1 cut(s) 1005
EcoT14I CCWWGG 2 cut(s) 381, 1511
EcoT38I GRGCYC 1 cut(s) 951
ErhI CCWWGG 2 cut(s) 381, 1511
FaeI CATG 6 cut(s) 19, 206, 385, 1301, 1476, 1515
FaqI GGGAC 1 cut(s) 371
FatI CATG 6 cut(s) 15, 202, 381, 1297, 1472, 1511
FauNDI CATATG 1 cut(s) 1351
FblI GTMKAC 2 cut(s) 219, 625
Fnu4HI GCNGC 5 cut(s) 189, 302, 344, 663, 1031
FokI GGATG 4 cut(s) 364, 1096, 1138, 1267
FriOI GRGCYC 1 cut(s) 951
Fsp4HI GCNGC 5 cut(s) 189, 302, 344, 663, 1031
FspBI CTAG 3 cut(s) 1061, 1085, 1145
GlaI GCGC 4 cut(s) 510, 553, 778, 780
GluI GCNGC 5 cut(s) 189, 302, 344, 663, 1031
HaeII RGCGCY 1 cut(s) 555
HaeIII GGCC 1 cut(s) 448
HhaI GCGC 4 cut(s) 511, 554, 779, 781
Hin1II CATG 6 cut(s) 19, 206, 385, 1301, 1476, 1515
Hin6I GCGC 4 cut(s) 509, 552, 777, 779
HinP1I GCGC 4 cut(s) 509, 552, 777, 779
HindIII AAGCTT 3 cut(s) 461, 485, 972
HphI GGTGA 1 cut(s) 115
Hpy166II GTNNAC 6 cut(s) 68, 220, 480, 519, 626, 1205
Hpy188I TCNGA 7 cut(s) 111, 200, 603, 862, 1231, 1387, 1404
Hpy188III TCNNGA 8 cut(s) 16, 60, 631, 766, 978, 1298, 1458, 1505
Hpy8I GTNNAC 6 cut(s) 68, 220, 480, 519, 626, 1205
HpyAV CCTTC 5 cut(s) 32, 459, 795, 829, 995
HpyCH4III ACNGT 3 cut(s) 533, 919, 1126
HpyCH4IV ACGT 1 cut(s) 351
HpyF10VI GCNNNNNNNGC 6 cut(s) 287, 671, 884, 1094, 1285, 1372
HpyF3I CTNAG 7 cut(s) 459, 483, 588, 645, 851, 859, 1114
HpySE526I ACGT 1 cut(s) 351
Hsp92II CATG 6 cut(s) 19, 206, 385, 1301, 1476, 1515
HspAI GCGC 4 cut(s) 509, 552, 777, 779
KpnI GGTACC 1 cut(s) 659
Kzo9I GATC 7 cut(s) 18, 195, 405, 535, 1000, 1467, 1501
LmnI GCTCC 2 cut(s) 946, 1507
Lsp1109I GCAGC 5 cut(s) 200, 313, 330, 649, 1017
LweI GCATC 2 cut(s) 315, 865
MaeI CTAG 3 cut(s) 1061, 1085, 1145
MaeII ACGT 1 cut(s) 351
MaeIII GTNAC 1 cut(s) 583
MalI GATC 7 cut(s) 20, 197, 407, 537, 1002, 1469, 1503
MboI GATC 7 cut(s) 18, 195, 405, 535, 1000, 1467, 1501
MboII GAAGA 6 cut(s) 106, 283, 402, 935, 1310, 1406
MfeI CAATTG 2 cut(s) 394, 694
MflI RGATCY 1 cut(s) 405
MhlI GDGCHC 2 cut(s) 527, 951
MlyI GAGTC 3 cut(s) 283, 851, 1157
MmeI TCCRAC 1 cut(s) 1505
MnlI CCTC 7 cut(s) 56, 176, 794, 856, 1007, 1012, 1123
MroXI GAANNNNTTC 1 cut(s) 1398
MseI TTAA 2 cut(s) 1074, 1531
MslI CAYNNNNRTG 2 cut(s) 14, 786
MspA1I CMGCKG 1 cut(s) 662
MspR9I CCNGG 1 cut(s) 1007
MunI CAATTG 2 cut(s) 394, 694
Mva1269I GAATGC 2 cut(s) 369, 610
MvaI CCWGG 1 cut(s) 1007
MvnI CGCG 1 cut(s) 779
MwoI GCNNNNNNNGC 6 cut(s) 287, 671, 884, 1094, 1285, 1372
NcoI CCATGG 2 cut(s) 381, 1511
NdeI CATATG 1 cut(s) 1351
NdeII GATC 7 cut(s) 18, 195, 405, 535, 1000, 1467, 1501
NlaIII CATG 6 cut(s) 19, 206, 385, 1301, 1476, 1515
NlaIV GGNNCC 4 cut(s) 164, 334, 657, 1509
NmeAIII GCCGAG 1 cut(s) 863
NspI RCATGY 1 cut(s) 206
NspV TTCGAA 2 cut(s) 616, 833
OliI CACNNNNGTG 1 cut(s) 786
PagI TCATGA 2 cut(s) 15, 1297
PasI CCCWGGG 1 cut(s) 1006
PauI GCGCGC 1 cut(s) 777
PciI ACATGT 1 cut(s) 202
PctI GAATGC 2 cut(s) 369, 610
PdmI GAANNNNTTC 1 cut(s) 1398
PfeI GAWTC 7 cut(s) 112, 338, 386, 957, 981, 1291, 1477
PflMI CCANNNNNTGG 1 cut(s) 577
PkrI GCNGC 5 cut(s) 190, 303, 345, 664, 1032
Ple19I CGATCG 1 cut(s) 1504
PleI GAGTC 3 cut(s) 282, 851, 1156
PpsI GAGTC 3 cut(s) 282, 851, 1156
PscI ACATGT 1 cut(s) 202
PshAI GACNNNNGTC 1 cut(s) 73
PshBI ATTAAT 1 cut(s) 1074
PsiI TTATAA 1 cut(s) 1413
Psp124BI GAGCTC 1 cut(s) 951
Psp6I CCWGG 1 cut(s) 1005
PspGI CCWGG 1 cut(s) 1005
PspN4I GGNNCC 4 cut(s) 164, 334, 657, 1509
PspPI GGNCC 1 cut(s) 1327
PsrI GAACNNNNNNTAC 2 cut(s) 1041, 1073
PstI CTGCAG 1 cut(s) 190
PsuI RGATCY 1 cut(s) 405
PteI GCGCGC 1 cut(s) 777
PvuI CGATCG 1 cut(s) 1504
PvuII CAGCTG 1 cut(s) 662
RsaI GTAC 1 cut(s) 657
RsaNI GTAC 1 cut(s) 656
RseI CAYNNNNRTG 2 cut(s) 14, 786
SacI GAGCTC 1 cut(s) 951
SaqAI TTAA 2 cut(s) 1074, 1531
SatI GCNGC 5 cut(s) 189, 302, 344, 663, 1031
Sau3AI GATC 7 cut(s) 18, 195, 405, 535, 1000, 1467, 1501
Sau96I GGNCC 1 cut(s) 1327
SchI GAGTC 3 cut(s) 283, 851, 1157
ScrFI CCNGG 1 cut(s) 1007
SduI GDGCHC 2 cut(s) 527, 951
SfaNI GCATC 2 cut(s) 315, 865
SfcI CTRYAG 5 cut(s) 186, 213, 547, 918, 1122
SfuI TTCGAA 2 cut(s) 616, 833
SinI GGWCC 1 cut(s) 1327
SmiMI CAYNNNNRTG 2 cut(s) 14, 786
SsiI CCGC 5 cut(s) 895, 1052, 1068, 1102, 1277
SspI AATATT 2 cut(s) 51, 613
SspMI CTAG 3 cut(s) 1061, 1085, 1145
SstI GAGCTC 1 cut(s) 951
StyD4I CCNGG 1 cut(s) 1005
StyI CCWWGG 2 cut(s) 381, 1511
TaaI ACNGT 3 cut(s) 533, 919, 1126
TaiI ACGT 1 cut(s) 354
TaqI TCGA 6 cut(s) 261, 413, 616, 833, 933, 999
TfiI GAWTC 7 cut(s) 112, 338, 386, 957, 981, 1291, 1477
Tru1I TTAA 2 cut(s) 1074, 1531
Tru9I TTAA 2 cut(s) 1074, 1531
TscAI CASTG 1 cut(s) 538
TseI GCWGC 5 cut(s) 188, 301, 343, 662, 1030
TspDTI ATGAA 6 cut(s) 171, 1062, 1092, 1098, 1283, 1314
TspGWI ACGGA 2 cut(s) 776, 1319
TspRI CASTG 1 cut(s) 538
Van91I CCANNNNNTGG 1 cut(s) 577
VpaK11BI GGWCC 1 cut(s) 1327
VspI ATTAAT 1 cut(s) 1074
XapI RAATTY 2 cut(s) 1105, 1187
XceI RCATGY 1 cut(s) 206
XcmI CCANNNNNNNNNTGG 1 cut(s) 29
XmiI GTMKAC 2 cut(s) 219, 625
XmnI GAANNNNTTC 1 cut(s) 1398
XspI CTAG 3 cut(s) 1061, 1085, 1145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.