pycom17g20760

Monothiol glutaredoxin-S15

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
19196273 .. 19197686
1414 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g20760.2

Sequence Viewer

Length: 288 bp
ATGCTTTACATGAAAGGAGTGCCTGAAGTTCCTCAATGTGGATTCAGCTCACTTGCTGTTAGAGTATTGAAACTATATGAAGTTCCTTTGGCTTCTAGAAATATTTTGGAAGACCCTGAACTGAAAAGTGCTGTAAAAGCCTTTAGCCACTGGCCGACGTTTCCTCAGATATTCATCAAGGGGGAGTTCGTCGGAGGGTCAGATATTATTCTCAATATGCATCAGAGTGGTGAACTGAAGGAAAAGCTTAAGGACATATCAGGCAGTCAGGAGAAGAAATCTGAATAA
Functional Annotation

Protein Analysis

96

Amino Acids

10.62

Weight (kDa)

6.73

Isoelectric Point (pI)

53.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 152
AcuI CTGAAG 2 cut(s) 45, 257
AfiI CCNNNNNNNGG 1 cut(s) 38
AflII CTTAAG 1 cut(s) 248
AgsI TTSAA 1 cut(s) 70
AluBI AGCT 2 cut(s) 48, 247
AluI AGCT 2 cut(s) 48, 247
AoxI GGCC 1 cut(s) 152
AsuHPI GGTGA 1 cut(s) 242
BbsI GAAGAC 1 cut(s) 117
BfaI CTAG 1 cut(s) 96
BfrI CTTAAG 1 cut(s) 248
BmsI GCATC 1 cut(s) 229
BpiI GAAGAC 1 cut(s) 117
BsaBI GATNNNNATC 1 cut(s) 173
Bsc4I CCNNNNNNNGG 1 cut(s) 38
Bse1I ACTGG 1 cut(s) 155
Bse8I GATNNNNATC 1 cut(s) 173
BseJI GATNNNNATC 1 cut(s) 173
BseLI CCNNNNNNNGG 1 cut(s) 38
BseMII CTCAG 1 cut(s) 179
BseNI ACTGG 1 cut(s) 155
BshFI GGCC 1 cut(s) 154
BslI CCNNNNNNNGG 1 cut(s) 38
BsnI GGCC 1 cut(s) 154
BspANI GGCC 1 cut(s) 154
BspCNI CTCAG 1 cut(s) 178
BspTI CTTAAG 1 cut(s) 248
BsrI ACTGG 1 cut(s) 155
BstAFI CTTAAG 1 cut(s) 248
BstDEI CTNAG 1 cut(s) 165
BstMWI GCNNNNNNNGC 1 cut(s) 137
BstV2I GAAGAC 1 cut(s) 117
BsuRI GGCC 1 cut(s) 154
BtsIMutI CAGTG 1 cut(s) 148
CviAII CATG 1 cut(s) 10
CviJI RGCY 6 cut(s) 48, 92, 140, 147, 154, 247
CviKI_1 RGCY 6 cut(s) 48, 92, 140, 147, 154, 247
DdeI CTNAG 1 cut(s) 165
EaeI YGGCCR 1 cut(s) 152
Eco57I CTGAAG 2 cut(s) 45, 257
EcoT22I ATGCAT 1 cut(s) 222
FaeI CATG 1 cut(s) 13
FaiI YATR 5 cut(s) 11, 76, 78, 218, 257
FatI CATG 1 cut(s) 9
FspBI CTAG 1 cut(s) 96
HaeIII GGCC 1 cut(s) 154
Hin1II CATG 1 cut(s) 13
HindIII AAGCTT 1 cut(s) 245
HinfI GANTC 1 cut(s) 42
HphI GGTGA 1 cut(s) 242
Hpy166II GTNNAC 1 cut(s) 233
Hpy188I TCNGA 5 cut(s) 168, 194, 202, 225, 283
Hpy188III TCNNGA 2 cut(s) 96, 269
Hpy8I GTNNAC 1 cut(s) 233
Hpy99I CGWCG 2 cut(s) 160, 194
HpyAV CCTTC 1 cut(s) 232
HpyCH4IV ACGT 1 cut(s) 158
HpyCH4V TGCA 1 cut(s) 220
HpyF10VI GCNNNNNNNGC 1 cut(s) 137
HpyF3I CTNAG 1 cut(s) 165
HpySE526I ACGT 1 cut(s) 158
Hsp92II CATG 1 cut(s) 13
LpnPI CCDG 5 cut(s) 36, 129, 136, 246, 254
LweI GCATC 1 cut(s) 229
MaeI CTAG 1 cut(s) 96
MaeII ACGT 1 cut(s) 158
MboII GAAGA 2 cut(s) 122, 286
MmeI TCCRAC 1 cut(s) 172
MnlI CCTC 3 cut(s) 42, 174, 188
Mph1103I ATGCAT 1 cut(s) 222
MseI TTAA 1 cut(s) 249
MslI CAYNNNNRTG 1 cut(s) 225
MspCI CTTAAG 1 cut(s) 248
MwoI GCNNNNNNNGC 1 cut(s) 137
NlaIII CATG 1 cut(s) 13
NsiI ATGCAT 1 cut(s) 222
PfeI GAWTC 1 cut(s) 42
RseI CAYNNNNRTG 1 cut(s) 225
SaqAI TTAA 1 cut(s) 249
SetI ASST 3 cut(s) 50, 161, 249
SfaNI GCATC 1 cut(s) 229
SgeI CNNG 9 cut(s) 22, 35, 65, 108, 128, 163, 190, 273, 281
SmiMI CAYNNNNRTG 1 cut(s) 225
SmlI CTYRAG 1 cut(s) 248
SmoI CTYRAG 1 cut(s) 248
SspI AATATT 1 cut(s) 103
SspMI CTAG 1 cut(s) 96
TaiI ACGT 1 cut(s) 161
TfiI GAWTC 1 cut(s) 42
Tru1I TTAA 1 cut(s) 249
Tru9I TTAA 1 cut(s) 249
TscAI CASTG 1 cut(s) 155
TspDTI ATGAA 3 cut(s) 26, 93, 163
TspRI CASTG 1 cut(s) 155
Vha464I CTTAAG 1 cut(s) 248
XbaI TCTAGA 1 cut(s) 95
XspI CTAG 1 cut(s) 96
Zsp2I ATGCAT 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.