Rh2AG383500

Monothiol glutaredoxin-S15

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0011348
Physical Location & Seq
Forward (+)
57349963 .. 57352142
2180 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG383500.1

Sequence Viewer

Length: 528 bp
ATGAACAGCATGGCAAGGTCTATTTCAAATTTGCTCTTCAAGGGTCTCTCATTTTCAAGCGTCCCAGCTTCTCGTTCTTCCACAATTGCTCCTGGGCTACTTTATCTCAATGGAATGAGATACTCCACCTCTGTGCCGAATGATCCCGACACGCATGATGACTTTAAACCCACGGATAAGTTTAAGGGTTCTGGCCTTAGCTTGAAGGACATTGTTGAACGGGATGTCAAGGAAAACCCTGTAATGCTTTATATGAAAGGAGTGCCTGATTCTCCTCAATGCGGATTCAGCTCACTTGCAGTGAGAGTGTTATCACTATACCATGTTCCTTTGAGTGCTAGAAATATCTTGGAAGATCCTGAGCTGAAAAATGCTGTGAAAGCCTATAGCACCTGGCCAACATTTCCACAGATTTTCATCAAGGGGGAGTTTATTGGAGGTTCAGATATTATTCTCAATATGCATCAGAACGGTGAGCTTAAGGAAAAGCTTAAGGATATTGCAGCCAATCAGGAGAAGTCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046872
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

175

Amino Acids

19.34

Weight (kDa)

6.84

Isoelectric Point (pI)

35.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 81 - 145 1.5e-17 Glutaredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 282
AclWI GGATC 2 cut(s) 137, 350
AcoI YGGCCR 1 cut(s) 395
AcsI RAATTY 1 cut(s) 28
AfiI CCNNNNNNNGG 1 cut(s) 281
AflII CTTAAG 2 cut(s) 479, 491
AgsI TTSAA 5 cut(s) 27, 40, 57, 205, 218
AjnI CCWGG 2 cut(s) 91, 392
AleI CACNNNNGTG 1 cut(s) 131
AluBI AGCT 6 cut(s) 68, 201, 291, 364, 478, 490
AluI AGCT 6 cut(s) 68, 201, 291, 364, 478, 490
Alw26I GTCTC 1 cut(s) 50
AlwI GGATC 2 cut(s) 137, 350
AoxI GGCC 2 cut(s) 193, 395
ApeKI GCWGC 1 cut(s) 503
ApoI RAATTY 1 cut(s) 28
AsuHPI GGTGA 1 cut(s) 485
BalI TGGCCA 1 cut(s) 397
BbvI GCAGC 1 cut(s) 515
BciT130I CCWGG 2 cut(s) 93, 394
BcoDI GTCTC 1 cut(s) 50
BfaI CTAG 1 cut(s) 339
BfmI CTRYAG 1 cut(s) 385
BfrI CTTAAG 2 cut(s) 479, 491
BisI GCNGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 505
Bme1390I CCNGG 2 cut(s) 93, 394
BmrFI CCNGG 2 cut(s) 93, 394
BmsI GCATC 1 cut(s) 472
Bpu10I CCTNAGC 2 cut(s) 197, 360
BsaBI GATNNNNATC 1 cut(s) 416
BsaI GGTCTC 1 cut(s) 50
BsaJI CCNNGG 2 cut(s) 92, 171
BsaXI ACNNNNNCTCC 2 cut(s) 73, 103
Bsc4I CCNNNNNNNGG 1 cut(s) 281
Bse8I GATNNNNATC 1 cut(s) 416
BseBI CCWGG 2 cut(s) 93, 394
BseDI CCNNGG 2 cut(s) 92, 171
BseGI GGATG 1 cut(s) 229
BseJI GATNNNNATC 1 cut(s) 416
BseLI CCNNNNNNNGG 1 cut(s) 281
BseMII CTCAG 1 cut(s) 351
BseRI GAGGAG 1 cut(s) 264
BseXI GCAGC 1 cut(s) 515
BseYI CCCAGC 1 cut(s) 64
BshFI GGCC 2 cut(s) 195, 397
BslFI GGGAC 1 cut(s) 47
BslI CCNNNNNNNGG 1 cut(s) 281
BsmAI GTCTC 1 cut(s) 50
BsmFI GGGAC 1 cut(s) 47
BsnI GGCC 2 cut(s) 195, 397
Bso31I GGTCTC 1 cut(s) 50
Bsp143I GATC 2 cut(s) 142, 355
BspACI CCGC 1 cut(s) 282
BspANI GGCC 2 cut(s) 195, 397
BspCNI CTCAG 1 cut(s) 352
BspPI GGATC 2 cut(s) 137, 350
BspQI GCTCTTC 1 cut(s) 41
BspTI CTTAAG 2 cut(s) 479, 491
BspTNI GGTCTC 1 cut(s) 50
BssECI CCNNGG 2 cut(s) 92, 171
BssMI GATC 2 cut(s) 142, 355
Bst2UI CCWGG 2 cut(s) 93, 394
Bst4CI ACNGT 1 cut(s) 473
Bst6I CTCTTC 1 cut(s) 41
BstAFI CTTAAG 2 cut(s) 479, 491
BstDEI CTNAG 2 cut(s) 197, 360
BstDSI CCRYGG 1 cut(s) 171
BstF5I GGATG 1 cut(s) 229
BstKTI GATC 2 cut(s) 145, 358
BstMAI GTCTC 1 cut(s) 50
BstMBI GATC 2 cut(s) 142, 355
BstMWI GCNNNNNNNGC 2 cut(s) 288, 380
BstNI CCWGG 2 cut(s) 93, 394
BstSCI CCNGG 2 cut(s) 91, 392
BstSFI CTRYAG 1 cut(s) 385
BstV1I GCAGC 1 cut(s) 515
BstX2I RGATCY 1 cut(s) 355
BstYI RGATCY 1 cut(s) 355
BsuRI GGCC 2 cut(s) 195, 397
BtgI CCRYGG 1 cut(s) 171
BtsCI GGATG 1 cut(s) 229
BtsI GCAGTG 1 cut(s) 306
BtsIMutI CAGTG 1 cut(s) 306
CseI GACGC 1 cut(s) 49
CviAII CATG 3 cut(s) 10, 155, 323
DdeI CTNAG 2 cut(s) 197, 360
DpnI GATC 2 cut(s) 144, 357
DpnII GATC 2 cut(s) 142, 355
DraI TTTAAA 1 cut(s) 166
EaeI YGGCCR 1 cut(s) 395
Eam1104I CTCTTC 1 cut(s) 41
EarI CTCTTC 1 cut(s) 41
Eco31I GGTCTC 1 cut(s) 50
EcoRII CCWGG 2 cut(s) 91, 392
EcoT22I ATGCAT 1 cut(s) 465
FaeI CATG 3 cut(s) 13, 158, 326
FaiI YATR 8 cut(s) 11, 156, 252, 254, 319, 324, 387, 461
FaqI GGGAC 1 cut(s) 47
FatI CATG 3 cut(s) 9, 154, 322
Fnu4HI GCNGC 1 cut(s) 504
FokI GGATG 1 cut(s) 236
Fsp4HI GCNGC 1 cut(s) 504
FspBI CTAG 1 cut(s) 339
GluI GCNGC 1 cut(s) 504
GsaI CCCAGC 1 cut(s) 68
HaeIII GGCC 2 cut(s) 195, 397
HgaI GACGC 1 cut(s) 49
Hin1II CATG 3 cut(s) 13, 158, 326
HindIII AAGCTT 1 cut(s) 488
HinfI GANTC 2 cut(s) 269, 285
HphI GGTGA 1 cut(s) 485
Hpy188I TCNGA 3 cut(s) 445, 468, 523
Hpy188III TCNNGA 3 cut(s) 146, 359, 512
HpyAV CCTTC 1 cut(s) 199
HpyCH4III ACNGT 1 cut(s) 473
HpyCH4V TGCA 3 cut(s) 299, 463, 503
HpyF10VI GCNNNNNNNGC 2 cut(s) 288, 380
HpyF3I CTNAG 2 cut(s) 197, 360
Hsp92II CATG 3 cut(s) 13, 158, 326
Kzo9I GATC 2 cut(s) 142, 355
LguI GCTCTTC 1 cut(s) 41
LmnI GCTCC 1 cut(s) 94
Lsp1109I GCAGC 1 cut(s) 515
LweI GCATC 1 cut(s) 472
MaeI CTAG 1 cut(s) 339
MalI GATC 2 cut(s) 144, 357
MboI GATC 2 cut(s) 142, 355
MboII GAAGA 3 cut(s) 28, 69, 365
MfeI CAATTG 1 cut(s) 84
MflI RGATCY 1 cut(s) 355
MlsI TGGCCA 1 cut(s) 397
MluCI AATT 2 cut(s) 28, 84
MluNI TGGCCA 1 cut(s) 397
MnlI CCTC 3 cut(s) 139, 285, 431
Mox20I TGGCCA 1 cut(s) 397
Mph1103I ATGCAT 1 cut(s) 465
MscI TGGCCA 1 cut(s) 397
MseI TTAA 4 cut(s) 165, 183, 480, 492
MslI CAYNNNNRTG 1 cut(s) 131
Msp20I TGGCCA 1 cut(s) 397
MspCI CTTAAG 2 cut(s) 479, 491
MspR9I CCNGG 2 cut(s) 93, 394
MunI CAATTG 1 cut(s) 84
MvaI CCWGG 2 cut(s) 93, 394
MwoI GCNNNNNNNGC 2 cut(s) 288, 380
NdeII GATC 2 cut(s) 142, 355
NlaIII CATG 3 cut(s) 13, 158, 326
NsiI ATGCAT 1 cut(s) 465
OliI CACNNNNGTG 1 cut(s) 131
PciSI GCTCTTC 1 cut(s) 41
PfeI GAWTC 2 cut(s) 269, 285
PkrI GCNGC 1 cut(s) 505
Psp6I CCWGG 2 cut(s) 91, 392
PspFI CCCAGC 1 cut(s) 64
PspGI CCWGG 2 cut(s) 91, 392
PsuI RGATCY 1 cut(s) 355
RseI CAYNNNNRTG 1 cut(s) 131
SapI GCTCTTC 1 cut(s) 41
SaqAI TTAA 4 cut(s) 165, 183, 480, 492
SatI GCNGC 1 cut(s) 504
Sau3AI GATC 2 cut(s) 142, 355
ScrFI CCNGG 2 cut(s) 93, 394
SfaNI GCATC 1 cut(s) 472
SfcI CTRYAG 1 cut(s) 385
SmiMI CAYNNNNRTG 1 cut(s) 131
SmlI CTYRAG 2 cut(s) 479, 491
SmoI CTYRAG 2 cut(s) 479, 491
Sse9I AATT 2 cut(s) 28, 84
SsiI CCGC 1 cut(s) 282
SspMI CTAG 1 cut(s) 339
StyD4I CCNGG 2 cut(s) 91, 392
TaaI ACNGT 1 cut(s) 473
TasI AATT 2 cut(s) 28, 84
TfiI GAWTC 2 cut(s) 269, 285
Tru1I TTAA 4 cut(s) 165, 183, 480, 492
Tru9I TTAA 4 cut(s) 165, 183, 480, 492
TscAI CASTG 1 cut(s) 306
TseI GCWGC 1 cut(s) 503
TspDTI ATGAA 3 cut(s) 17, 269, 406
TspGWI ACGGA 1 cut(s) 188
TspRI CASTG 1 cut(s) 306
Vha464I CTTAAG 2 cut(s) 479, 491
XapI RAATTY 1 cut(s) 28
XspI CTAG 1 cut(s) 339
Zsp2I ATGCAT 1 cut(s) 465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.