Rh2DG406800

Monothiol glutaredoxin-S15

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0011348
Physical Location & Seq
Forward (+)
59024553 .. 59026967
2415 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG406800.1

Sequence Viewer

Length: 597 bp
ATGGCCAGTTCAAATCACTACACAGAAAAACAGAGTTCGCCTCGTCCTTCCATCTCCTTCAAGTTGTTCTTCTTCAGCATGGCTAGGTCTATTTCAAATTTGCTCTTCAAGGGTCTCTCATTTTCAGGCAGCCCAGCTTCTCGTTCTTCCACTATTGCTCCTGGGCTACTCTATCTCAATGGAATGAGATACTCCACCTCTGAGCCGAATGATCCCGACACCCATGATGACTTTAAACCCACCGATAAGTTTAAGGGTTCTGGCCTTAGCTTGAAGGACATTGTTGAACGGGATGTCAAGGAAAACCCTGTTATGCTTTATATGAAAGGAGTGCCTGATTCTCCTCTATGCGGATTCAGCTCACTTGCAGTGAGAGTGTTATCACTATACCATGTTCCTTTGAGTGCTAGAAATATCTTGGAAGATCCTGAGCTGAAAAATGCTGTGAAAGCCTATAGCACCTGGCCAACATTTCCACAGATTTTCATCAAGGGGGAGTTTATTGGAGGTTCAGATATTATTCTCAATATGCATCAGAACGGTGAGCTTAAGGAAAAGCTTAAGGATATTGCAGCCAATCAGGAGAAGTCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046872
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

198

Amino Acids

21.99

Weight (kDa)

7.81

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 104 - 168 1.7e-16 Glutaredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 351
AclWI GGATC 2 cut(s) 206, 419
AcoI YGGCCR 2 cut(s) 3, 464
AcsI RAATTY 1 cut(s) 97
AcuI CTGAAG 1 cut(s) 58
AfiI CCNNNNNNNGG 1 cut(s) 350
AflII CTTAAG 2 cut(s) 548, 560
AgsI TTSAA 6 cut(s) 12, 61, 96, 109, 274, 287
AjnI CCWGG 2 cut(s) 160, 461
AluBI AGCT 6 cut(s) 137, 270, 360, 433, 547, 559
AluI AGCT 6 cut(s) 137, 270, 360, 433, 547, 559
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 2 cut(s) 206, 419
AoxI GGCC 3 cut(s) 3, 262, 464
ApeKI GCWGC 2 cut(s) 129, 572
ApoI RAATTY 1 cut(s) 97
AsuHPI GGTGA 1 cut(s) 554
BalI TGGCCA 2 cut(s) 5, 466
BbvI GCAGC 2 cut(s) 141, 584
BccI CCATC 1 cut(s) 59
BciT130I CCWGG 2 cut(s) 162, 463
BcoDI GTCTC 1 cut(s) 119
BfaI CTAG 2 cut(s) 84, 408
BfmI CTRYAG 1 cut(s) 454
BfrI CTTAAG 2 cut(s) 548, 560
BisI GCNGC 2 cut(s) 130, 573
BlsI GCNGC 2 cut(s) 131, 574
Bme1390I CCNGG 2 cut(s) 162, 463
BmrFI CCNGG 2 cut(s) 162, 463
BmsI GCATC 1 cut(s) 541
BplI GAGNNNNNCTC 2 cut(s) 25, 57
Bpu10I CCTNAGC 2 cut(s) 266, 429
BsaBI GATNNNNATC 1 cut(s) 485
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 1 cut(s) 161
BsaXI ACNNNNNCTCC 2 cut(s) 142, 172
Bsc4I CCNNNNNNNGG 1 cut(s) 350
Bse1I ACTGG 1 cut(s) 6
Bse8I GATNNNNATC 1 cut(s) 485
BseBI CCWGG 2 cut(s) 162, 463
BseDI CCNNGG 1 cut(s) 161
BseGI GGATG 1 cut(s) 298
BseJI GATNNNNATC 1 cut(s) 485
BseLI CCNNNNNNNGG 1 cut(s) 350
BseMII CTCAG 2 cut(s) 192, 420
BseNI ACTGG 1 cut(s) 6
BseRI GAGGAG 1 cut(s) 333
BseXI GCAGC 2 cut(s) 141, 584
BseYI CCCAGC 1 cut(s) 133
BshFI GGCC 3 cut(s) 5, 264, 466
BslI CCNNNNNNNGG 1 cut(s) 350
BsmAI GTCTC 1 cut(s) 119
BsnI GGCC 3 cut(s) 5, 264, 466
Bso31I GGTCTC 1 cut(s) 119
Bsp143I GATC 2 cut(s) 211, 424
BspACI CCGC 1 cut(s) 351
BspANI GGCC 3 cut(s) 5, 264, 466
BspCNI CTCAG 2 cut(s) 193, 421
BspPI GGATC 2 cut(s) 206, 419
BspQI GCTCTTC 1 cut(s) 110
BspTI CTTAAG 2 cut(s) 548, 560
BspTNI GGTCTC 1 cut(s) 119
BsrI ACTGG 1 cut(s) 6
BssECI CCNNGG 1 cut(s) 161
BssMI GATC 2 cut(s) 211, 424
Bst2UI CCWGG 2 cut(s) 162, 463
Bst4CI ACNGT 1 cut(s) 542
Bst6I CTCTTC 1 cut(s) 110
BstAFI CTTAAG 2 cut(s) 548, 560
BstDEI CTNAG 3 cut(s) 201, 266, 429
BstF5I GGATG 1 cut(s) 298
BstKTI GATC 2 cut(s) 214, 427
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 2 cut(s) 211, 424
BstMWI GCNNNNNNNGC 2 cut(s) 357, 449
BstNI CCWGG 2 cut(s) 162, 463
BstSCI CCNGG 2 cut(s) 160, 461
BstSFI CTRYAG 1 cut(s) 454
BstV1I GCAGC 2 cut(s) 141, 584
BstX2I RGATCY 1 cut(s) 424
BstYI RGATCY 1 cut(s) 424
BsuRI GGCC 3 cut(s) 5, 264, 466
BtsCI GGATG 1 cut(s) 298
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 1 cut(s) 375
CviAII CATG 3 cut(s) 79, 224, 392
DdeI CTNAG 3 cut(s) 201, 266, 429
DpnI GATC 2 cut(s) 213, 426
DpnII GATC 2 cut(s) 211, 424
DraI TTTAAA 1 cut(s) 235
EaeI YGGCCR 2 cut(s) 3, 464
Eam1104I CTCTTC 1 cut(s) 110
EarI CTCTTC 1 cut(s) 110
Eco31I GGTCTC 1 cut(s) 119
Eco57I CTGAAG 1 cut(s) 58
EcoRII CCWGG 2 cut(s) 160, 461
EcoT22I ATGCAT 1 cut(s) 534
FaeI CATG 3 cut(s) 82, 227, 395
FalI AAGNNNNNCTT 2 cut(s) 53, 85
FatI CATG 3 cut(s) 78, 223, 391
Fnu4HI GCNGC 2 cut(s) 130, 573
FokI GGATG 1 cut(s) 305
Fsp4HI GCNGC 2 cut(s) 130, 573
FspBI CTAG 2 cut(s) 84, 408
GluI GCNGC 2 cut(s) 130, 573
GsaI CCCAGC 1 cut(s) 137
HaeIII GGCC 3 cut(s) 5, 264, 466
Hin1II CATG 3 cut(s) 82, 227, 395
HindIII AAGCTT 1 cut(s) 557
HinfI GANTC 2 cut(s) 338, 354
HphI GGTGA 1 cut(s) 554
Hpy188I TCNGA 4 cut(s) 202, 514, 537, 592
Hpy188III TCNNGA 3 cut(s) 215, 428, 581
HpyAV CCTTC 3 cut(s) 57, 67, 268
HpyCH4III ACNGT 1 cut(s) 542
HpyCH4V TGCA 3 cut(s) 368, 532, 572
HpyF10VI GCNNNNNNNGC 2 cut(s) 357, 449
HpyF3I CTNAG 3 cut(s) 201, 266, 429
Hsp92II CATG 3 cut(s) 82, 227, 395
Kzo9I GATC 2 cut(s) 211, 424
LguI GCTCTTC 1 cut(s) 110
LmnI GCTCC 1 cut(s) 163
Lsp1109I GCAGC 2 cut(s) 141, 584
LweI GCATC 1 cut(s) 541
MaeI CTAG 2 cut(s) 84, 408
MalI GATC 2 cut(s) 213, 426
MboI GATC 2 cut(s) 211, 424
MboII GAAGA 5 cut(s) 61, 64, 97, 138, 434
MflI RGATCY 1 cut(s) 424
MlsI TGGCCA 2 cut(s) 5, 466
MluCI AATT 1 cut(s) 97
MluNI TGGCCA 2 cut(s) 5, 466
MnlI CCTC 4 cut(s) 51, 208, 354, 500
Mox20I TGGCCA 2 cut(s) 5, 466
Mph1103I ATGCAT 1 cut(s) 534
MscI TGGCCA 2 cut(s) 5, 466
MseI TTAA 4 cut(s) 234, 252, 549, 561
Msp20I TGGCCA 2 cut(s) 5, 466
MspCI CTTAAG 2 cut(s) 548, 560
MspR9I CCNGG 2 cut(s) 162, 463
MvaI CCWGG 2 cut(s) 162, 463
MwoI GCNNNNNNNGC 2 cut(s) 357, 449
NdeII GATC 2 cut(s) 211, 424
NlaIII CATG 3 cut(s) 82, 227, 395
NsiI ATGCAT 1 cut(s) 534
PciSI GCTCTTC 1 cut(s) 110
PfeI GAWTC 2 cut(s) 338, 354
PkrI GCNGC 2 cut(s) 131, 574
Psp6I CCWGG 2 cut(s) 160, 461
PspFI CCCAGC 1 cut(s) 133
PspGI CCWGG 2 cut(s) 160, 461
PsuI RGATCY 1 cut(s) 424
SapI GCTCTTC 1 cut(s) 110
SaqAI TTAA 4 cut(s) 234, 252, 549, 561
SatI GCNGC 2 cut(s) 130, 573
Sau3AI GATC 2 cut(s) 211, 424
ScrFI CCNGG 2 cut(s) 162, 463
SfaNI GCATC 1 cut(s) 541
SfcI CTRYAG 1 cut(s) 454
SmlI CTYRAG 2 cut(s) 548, 560
SmoI CTYRAG 2 cut(s) 548, 560
Sse9I AATT 1 cut(s) 97
SsiI CCGC 1 cut(s) 351
SspMI CTAG 2 cut(s) 84, 408
StyD4I CCNGG 2 cut(s) 160, 461
TaaI ACNGT 1 cut(s) 542
TasI AATT 1 cut(s) 97
TfiI GAWTC 2 cut(s) 338, 354
Tru1I TTAA 4 cut(s) 234, 252, 549, 561
Tru9I TTAA 4 cut(s) 234, 252, 549, 561
TscAI CASTG 1 cut(s) 375
TseI GCWGC 2 cut(s) 129, 572
TspDTI ATGAA 2 cut(s) 338, 475
TspRI CASTG 1 cut(s) 375
Vha464I CTTAAG 2 cut(s) 548, 560
XapI RAATTY 1 cut(s) 97
XspI CTAG 2 cut(s) 84, 408
Zsp2I ATGCAT 1 cut(s) 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.