Rh2CG370000

Monothiol glutaredoxin-S15

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0011348
Physical Location & Seq
Forward (+)
50242251 .. 50245700
3450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG370000.1

Sequence Viewer

Length: 624 bp
ATGGAAGTACATAACAGACGGACAGCAGCCAGTTCAAAATCACTGGACAGAAAAGTACTGTTGGTTCTTCCTTCCATCTTCTTCTTCTTCTTCTTCTTCTTCAGCATGGCTAGGTCTATTTCAAATTTGCTCTTCAAGGGTCTCTCATTTTCAAGCGTCCCAGCTTCTCGTTCTTCCACAATTGCTCCTGGGCTACTTTATCTCAATGGAATGAGATACTCCACCTCTGTGCCGAATGATCCCGACACGCATGATGACTTTAAACCCACGGATAAGTTTAAGGGTTCTGGCCTTAGCTTGAAGGACATTGTTGAACGGGATGTCAAGGAAAACCCTGTAATGCTTTATATGAAAGGAGTGCCTGATTCTCCTCAATGCGGATTCAGCTCACTTGCAGTGAGAGTGTTATCACTATACCATGTTCCTTTGAGTGCTAGAAATATCTTGGAAGATCCTGAGCTGAAAAATGCTGTGAAAGCCTATAGCACCTGGCCAACATTTCCACAGATTTTCATCAAGGGGGAGTTTATTGGAGGTTCAGATATTATTCTCAATATGCATCAGAACGGTGAGCTTAAGGAAAAGCTTAAGGATATTGCAGCCAATCAGGAGAAGTCTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046872
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

207

Amino Acids

23.18

Weight (kDa)

8.91

Isoelectric Point (pI)

37.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 113 - 177 2.1e-17 Glutaredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 378
AclWI GGATC 2 cut(s) 233, 446
AcoI YGGCCR 1 cut(s) 491
AcsI RAATTY 1 cut(s) 124
AcuI CTGAAG 1 cut(s) 85
AfaI GTAC 2 cut(s) 9, 57
AfiI CCNNNNNNNGG 1 cut(s) 377
AflII CTTAAG 2 cut(s) 575, 587
AgsI TTSAA 6 cut(s) 36, 123, 136, 153, 301, 314
AjnI CCWGG 2 cut(s) 187, 488
AleI CACNNNNGTG 1 cut(s) 227
AluBI AGCT 6 cut(s) 164, 297, 387, 460, 574, 586
AluI AGCT 6 cut(s) 164, 297, 387, 460, 574, 586
Alw26I GTCTC 1 cut(s) 146
AlwI GGATC 2 cut(s) 233, 446
AoxI GGCC 2 cut(s) 289, 491
ApeKI GCWGC 2 cut(s) 26, 599
ApoI RAATTY 1 cut(s) 124
AsuHPI GGTGA 1 cut(s) 581
BalI TGGCCA 1 cut(s) 493
BbvI GCAGC 2 cut(s) 38, 611
BccI CCATC 1 cut(s) 83
BciT130I CCWGG 2 cut(s) 189, 490
BcoDI GTCTC 1 cut(s) 146
BfaI CTAG 2 cut(s) 111, 435
BfmI CTRYAG 1 cut(s) 481
BfrI CTTAAG 2 cut(s) 575, 587
BisI GCNGC 2 cut(s) 27, 600
BlsI GCNGC 2 cut(s) 28, 601
BmcAI AGTACT 1 cut(s) 57
Bme1390I CCNGG 2 cut(s) 189, 490
BmrFI CCNGG 2 cut(s) 189, 490
BmsI GCATC 1 cut(s) 568
Bpu10I CCTNAGC 2 cut(s) 293, 456
BsaBI GATNNNNATC 1 cut(s) 512
BsaI GGTCTC 1 cut(s) 146
BsaJI CCNNGG 2 cut(s) 188, 267
BsaXI ACNNNNNCTCC 2 cut(s) 169, 199
Bsc4I CCNNNNNNNGG 1 cut(s) 377
Bse1I ACTGG 2 cut(s) 30, 48
Bse8I GATNNNNATC 1 cut(s) 512
BseBI CCWGG 2 cut(s) 189, 490
BseDI CCNNGG 2 cut(s) 188, 267
BseGI GGATG 1 cut(s) 325
BseJI GATNNNNATC 1 cut(s) 512
BseLI CCNNNNNNNGG 1 cut(s) 377
BseMII CTCAG 1 cut(s) 447
BseNI ACTGG 2 cut(s) 30, 48
BseRI GAGGAG 1 cut(s) 360
BseXI GCAGC 2 cut(s) 38, 611
BseYI CCCAGC 1 cut(s) 160
BshFI GGCC 2 cut(s) 291, 493
BslFI GGGAC 1 cut(s) 143
BslI CCNNNNNNNGG 1 cut(s) 377
BsmAI GTCTC 1 cut(s) 146
BsmFI GGGAC 1 cut(s) 143
BsnI GGCC 2 cut(s) 291, 493
Bso31I GGTCTC 1 cut(s) 146
Bsp143I GATC 2 cut(s) 238, 451
BspACI CCGC 1 cut(s) 378
BspANI GGCC 2 cut(s) 291, 493
BspCNI CTCAG 1 cut(s) 448
BspPI GGATC 2 cut(s) 233, 446
BspQI GCTCTTC 1 cut(s) 137
BspTI CTTAAG 2 cut(s) 575, 587
BspTNI GGTCTC 1 cut(s) 146
BsrI ACTGG 2 cut(s) 30, 48
BssECI CCNNGG 2 cut(s) 188, 267
BssMI GATC 2 cut(s) 238, 451
Bst2UI CCWGG 2 cut(s) 189, 490
Bst4CI ACNGT 2 cut(s) 60, 569
Bst6I CTCTTC 1 cut(s) 137
BstAFI CTTAAG 2 cut(s) 575, 587
BstDEI CTNAG 2 cut(s) 293, 456
BstDSI CCRYGG 1 cut(s) 267
BstF5I GGATG 1 cut(s) 325
BstKTI GATC 2 cut(s) 241, 454
BstMAI GTCTC 1 cut(s) 146
BstMBI GATC 2 cut(s) 238, 451
BstMWI GCNNNNNNNGC 2 cut(s) 384, 476
BstNI CCWGG 2 cut(s) 189, 490
BstSCI CCNGG 2 cut(s) 187, 488
BstSFI CTRYAG 1 cut(s) 481
BstV1I GCAGC 2 cut(s) 38, 611
BstX2I RGATCY 1 cut(s) 451
BstYI RGATCY 1 cut(s) 451
BsuRI GGCC 2 cut(s) 291, 493
BtgI CCRYGG 1 cut(s) 267
BtsCI GGATG 1 cut(s) 325
BtsI GCAGTG 1 cut(s) 402
BtsIMutI CAGTG 2 cut(s) 41, 402
CseI GACGC 1 cut(s) 145
Csp6I GTAC 2 cut(s) 8, 56
CviAII CATG 3 cut(s) 106, 251, 419
CviQI GTAC 2 cut(s) 8, 56
DdeI CTNAG 2 cut(s) 293, 456
DpnI GATC 2 cut(s) 240, 453
DpnII GATC 2 cut(s) 238, 451
DraI TTTAAA 1 cut(s) 262
EaeI YGGCCR 1 cut(s) 491
Eam1104I CTCTTC 1 cut(s) 137
EarI CTCTTC 1 cut(s) 137
Eco31I GGTCTC 1 cut(s) 146
Eco57I CTGAAG 1 cut(s) 85
EcoRII CCWGG 2 cut(s) 187, 488
EcoT22I ATGCAT 1 cut(s) 561
FaeI CATG 3 cut(s) 109, 254, 422
FaiI YATR 9 cut(s) 12, 107, 252, 348, 350, 415, 420, 483, 557
FaqI GGGAC 1 cut(s) 143
FatI CATG 3 cut(s) 105, 250, 418
Fnu4HI GCNGC 2 cut(s) 27, 600
FokI GGATG 1 cut(s) 332
Fsp4HI GCNGC 2 cut(s) 27, 600
FspBI CTAG 2 cut(s) 111, 435
GluI GCNGC 2 cut(s) 27, 600
GsaI CCCAGC 1 cut(s) 164
HaeIII GGCC 2 cut(s) 291, 493
HgaI GACGC 1 cut(s) 145
Hin1II CATG 3 cut(s) 109, 254, 422
HindIII AAGCTT 1 cut(s) 584
HinfI GANTC 2 cut(s) 365, 381
HphI GGTGA 1 cut(s) 581
Hpy188I TCNGA 3 cut(s) 541, 564, 619
Hpy188III TCNNGA 3 cut(s) 242, 455, 608
HpyAV CCTTC 2 cut(s) 81, 295
HpyCH4III ACNGT 2 cut(s) 60, 569
HpyCH4V TGCA 3 cut(s) 395, 559, 599
HpyF10VI GCNNNNNNNGC 2 cut(s) 384, 476
HpyF3I CTNAG 2 cut(s) 293, 456
Hsp92II CATG 3 cut(s) 109, 254, 422
Kzo9I GATC 2 cut(s) 238, 451
LguI GCTCTTC 1 cut(s) 137
LmnI GCTCC 1 cut(s) 190
Lsp1109I GCAGC 2 cut(s) 38, 611
LweI GCATC 1 cut(s) 568
MaeI CTAG 2 cut(s) 111, 435
MalI GATC 2 cut(s) 240, 453
MboI GATC 2 cut(s) 238, 451
MfeI CAATTG 1 cut(s) 180
MflI RGATCY 1 cut(s) 451
MlsI TGGCCA 1 cut(s) 493
MluCI AATT 2 cut(s) 124, 180
MluNI TGGCCA 1 cut(s) 493
MnlI CCTC 3 cut(s) 235, 381, 527
Mox20I TGGCCA 1 cut(s) 493
Mph1103I ATGCAT 1 cut(s) 561
MscI TGGCCA 1 cut(s) 493
MseI TTAA 4 cut(s) 261, 279, 576, 588
MslI CAYNNNNRTG 1 cut(s) 227
Msp20I TGGCCA 1 cut(s) 493
MspCI CTTAAG 2 cut(s) 575, 587
MspR9I CCNGG 2 cut(s) 189, 490
MunI CAATTG 1 cut(s) 180
MvaI CCWGG 2 cut(s) 189, 490
MwoI GCNNNNNNNGC 2 cut(s) 384, 476
NdeII GATC 2 cut(s) 238, 451
NlaIII CATG 3 cut(s) 109, 254, 422
NsiI ATGCAT 1 cut(s) 561
OliI CACNNNNGTG 1 cut(s) 227
PciSI GCTCTTC 1 cut(s) 137
PfeI GAWTC 2 cut(s) 365, 381
PkrI GCNGC 2 cut(s) 28, 601
Psp6I CCWGG 2 cut(s) 187, 488
PspFI CCCAGC 1 cut(s) 160
PspGI CCWGG 2 cut(s) 187, 488
PsrI GAACNNNNNNTAC 2 cut(s) 48, 80
PsuI RGATCY 1 cut(s) 451
RsaI GTAC 2 cut(s) 9, 57
RsaNI GTAC 2 cut(s) 8, 56
RseI CAYNNNNRTG 1 cut(s) 227
SapI GCTCTTC 1 cut(s) 137
SaqAI TTAA 4 cut(s) 261, 279, 576, 588
SatI GCNGC 2 cut(s) 27, 600
Sau3AI GATC 2 cut(s) 238, 451
ScaI AGTACT 1 cut(s) 57
ScrFI CCNGG 2 cut(s) 189, 490
SfaNI GCATC 1 cut(s) 568
SfcI CTRYAG 1 cut(s) 481
SmiMI CAYNNNNRTG 1 cut(s) 227
SmlI CTYRAG 2 cut(s) 575, 587
SmoI CTYRAG 2 cut(s) 575, 587
Sse9I AATT 2 cut(s) 124, 180
SsiI CCGC 1 cut(s) 378
SspMI CTAG 2 cut(s) 111, 435
StyD4I CCNGG 2 cut(s) 187, 488
TaaI ACNGT 2 cut(s) 60, 569
TasI AATT 2 cut(s) 124, 180
TatI WGTACW 2 cut(s) 7, 55
TfiI GAWTC 2 cut(s) 365, 381
Tru1I TTAA 4 cut(s) 261, 279, 576, 588
Tru9I TTAA 4 cut(s) 261, 279, 576, 588
TscAI CASTG 2 cut(s) 48, 402
TseI GCWGC 2 cut(s) 26, 599
TspDTI ATGAA 2 cut(s) 365, 502
TspGWI ACGGA 2 cut(s) 34, 284
TspRI CASTG 2 cut(s) 48, 402
Vha464I CTTAAG 2 cut(s) 575, 587
XapI RAATTY 1 cut(s) 124
XspI CTAG 2 cut(s) 111, 435
ZrmI AGTACT 1 cut(s) 57
Zsp2I ATGCAT 1 cut(s) 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.