Rorug02G0332700

Monothiol glutaredoxin-S15

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0011348
Physical Location & Seq
Reverse (-)
41214888 .. 41218837
3950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0332700.1

Sequence Viewer

Length: 1176 bp
ATGGGATTGCTTCCCGAACAAAAAATGACAGGTGCCCTGAGAATGCTTGCGTATGGTGCAGCTGCAGATCAACGAGATGAGATCACTAGGATGGGGGCTTCTACAGCACTGGAATGTCTCAAGAAATATTGTAGACCAGTCAAGTTTCTTTATGCTGGGTGGTTCCTTCGTCCTCCAAGTCTCGCTGATCTATATAGGCTTCTCAACAGAGGACAATGCCACCGTGCTAGGTTGTTTAAACTGGAGGATCTTCGAGCCATCATGATAAGTTGTATCATTCTTCATAACATAATTGTGGATGATGAGTTTGTTGAGGAAGAATTTGTGGAGTCTCAAGAAGATGATCTAATGAATCCAGCAATGGCAACCATTTATGACTGGCATGTAGAGTCGGCCTACCTCCACAAGTGCCTACAAGATAATTTGGTGATGCACAATTGGAACATGGATGTCGAATTGAGGTATGTAGCAACCACTGCTACCACCATCGGAAATAGTCGTAGTGACGCCACGGGGTGTCCATGGTTTGGTAGTAGTTTTCCTTGCGGGGCGACGCTAGTCAACAAGTTTCGGGATTCCGGTTGCTTCAAACCTAAGGTTTTTCAGCCACGAATGGAGGTAAACCTTTCTTTTGGGATGATTGAGTTCGGCGGAGTTGCCATGGAATCGATCAAATTATTACGACTGGCAAGATTTCAGTTTGAGAATCGTTCATTTCAACCAAGTTGCTGTGGTAAGTTTCCATTTTTGGAAACCTACCGGGCTTTTCTCTCTCCTCTCCCCCGATCCTTTCCCCTCTTCGACCCGATTGCTCCTTCCTCCGATTTCTTCCTCCTCCGGCCACCCCACGACGGAATCAGGGCACCGGCAAGCTCGCCTCTTCATCCTTGTCACGCCTGTAGTGGTGTTTTGCGGTGGCTCGGCCGGTGGAGCTCGGAATTGAGCCGTGAAGTTCACTGTAGCAGTTTGGGAGTTTTATCGATTTCCGGCGATTCCGGCCGTCTCCGGCCACCAAACCGGCGTCGAAGGGTTCTTGGAGTTTCTGGAAAAATTTCACCGACCAATTTGGAGCCCTTCAAGGTGGTGCTGCCAAAATTTGGTAGCCATCAGAGGTGGCGGCCTCCGGCGCGTGGGGCCCACGCGCTGCCACTGTTGGTGGCGCGTGGAAGCGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046872
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

391

Amino Acids

44.07

Weight (kDa)

9.12

Isoelectric Point (pI)

64.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 32, 862
AccB7I CCANNNNNTGG 2 cut(s) 527, 1097
AccI GTMKAC 1 cut(s) 133
AccII CGCG 3 cut(s) 1129, 1142, 1162
AciI CCGC 4 cut(s) 546, 651, 913, 1117
AclWI GGATC 2 cut(s) 255, 780
AcoI YGGCCR 4 cut(s) 839, 922, 997, 1007
AcsI RAATTY 3 cut(s) 320, 1050, 1094
AcyI GRCGYC 2 cut(s) 507, 1021
AdeI CACNNNGTG 1 cut(s) 516
AfiI CCNNNNNNNGG 4 cut(s) 527, 851, 1097, 1130
AgsI TTSAA 3 cut(s) 589, 719, 1078
AluBI AGCT 3 cut(s) 62, 873, 933
AluI AGCT 3 cut(s) 62, 873, 933
Alw21I GWGCWC 1 cut(s) 935
Alw26I GTCTC 4 cut(s) 122, 185, 336, 1007
AlwI GGATC 2 cut(s) 255, 780
AoxI GGCC 7 cut(s) 393, 839, 922, 997, 1007, 1118, 1134
ApaI GGGCCC 1 cut(s) 1138
ApeKI GCWGC 4 cut(s) 59, 62, 1087, 1144
ApoI RAATTY 3 cut(s) 320, 1050, 1094
Asp700I GAANNNNTTC 1 cut(s) 1051
AspLEI GCGC 3 cut(s) 1129, 1144, 1162
AspS9I GGNCC 2 cut(s) 1134, 1135
AsuC2I CCSGG 1 cut(s) 761
AsuHPI GGTGA 2 cut(s) 439, 1047
AxyI CCTNAGG 1 cut(s) 594
BaeGI GKGCMC 3 cut(s) 37, 865, 1138
BanI GGYRCC 2 cut(s) 32, 862
BanII GRGCYC 3 cut(s) 935, 1074, 1138
Bbv12I GWGCWC 1 cut(s) 935
BbvI GCAGC 4 cut(s) 49, 71, 1074, 1131
BccI CCATC 4 cut(s) 85, 266, 494, 1113
BceAI ACGGC 2 cut(s) 930, 984
BcgI CGANNNNNNTGC 2 cut(s) 791, 825
BcnI CCSGG 1 cut(s) 761
BcoDI GTCTC 4 cut(s) 122, 185, 336, 1007
BfaI CTAG 3 cut(s) 87, 228, 557
BfmI CTRYAG 4 cut(s) 63, 102, 898, 958
BisI GCNGC 5 cut(s) 60, 63, 1088, 1118, 1145
BlsI GCNGC 5 cut(s) 61, 64, 1089, 1119, 1146
Bme1390I CCNGG 1 cut(s) 761
BmgT120I GGNCC 2 cut(s) 1134, 1135
BmiI GGNNCC 6 cut(s) 34, 164, 864, 1071, 1135, 1136
BmrFI CCNGG 1 cut(s) 761
BmsI GCATC 1 cut(s) 420
BoxI GACNNNNGTC 1 cut(s) 557
BpmI CTGGAG 1 cut(s) 263
BpuEI CTTGAG 2 cut(s) 104, 318
BpuMI CCSGG 1 cut(s) 761
Bsa29I ATCGAT 2 cut(s) 668, 980
BsaHI GRCGYC 2 cut(s) 507, 1021
BsaJI CCNNGG 3 cut(s) 510, 521, 660
BsaWI WCCGGW 1 cut(s) 578
Bsc4I CCNNNNNNNGG 4 cut(s) 527, 851, 1097, 1130
Bse118I RCCGGY 3 cut(s) 865, 924, 1017
Bse1I ACTGG 5 cut(s) 114, 137, 246, 383, 690
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 1 cut(s) 366
BseCI ATCGAT 2 cut(s) 668, 980
BseDI CCNNGG 3 cut(s) 510, 521, 660
BseGI GGATG 5 cut(s) 96, 304, 454, 642, 883
BseLI CCNNNNNNNGG 4 cut(s) 527, 851, 1097, 1130
BseMI GCAATG 1 cut(s) 366
BseMII CTCAG 1 cut(s) 29
BseNI ACTGG 5 cut(s) 114, 137, 246, 383, 690
BseRI GAGGAG 2 cut(s) 765, 824
BseSI GKGCMC 3 cut(s) 37, 865, 1138
BseX3I CGGCCG 2 cut(s) 922, 997
BseXI GCAGC 4 cut(s) 49, 71, 1074, 1131
BseYI CCCAGC 1 cut(s) 155
BsgI GTGCAG 1 cut(s) 78
Bsh1236I CGCG 3 cut(s) 1129, 1142, 1162
Bsh1285I CGRYCG 2 cut(s) 925, 1000
BshFI GGCC 7 cut(s) 395, 841, 924, 999, 1009, 1120, 1136
BshNI GGYRCC 2 cut(s) 32, 862
BshVI ATCGAT 2 cut(s) 668, 980
BsiEI CGRYCG 2 cut(s) 925, 1000
BsiHKAI GWGCWC 1 cut(s) 935
BslI CCNNNNNNNGG 4 cut(s) 527, 851, 1097, 1130
BsmAI GTCTC 4 cut(s) 122, 185, 336, 1007
BsmBI CGTCTC 1 cut(s) 1007
BsmI GAATGC 1 cut(s) 48
BsnI GGCC 7 cut(s) 395, 841, 924, 999, 1009, 1120, 1136
Bsp120I GGGCCC 1 cut(s) 1134
Bsp1286I GDGCHC 5 cut(s) 37, 865, 935, 1074, 1138
Bsp143I GATC 7 cut(s) 67, 81, 187, 247, 343, 669, 785
Bsp19I CCATGG 2 cut(s) 521, 660
BspACI CCGC 4 cut(s) 546, 651, 913, 1117
BspANI GGCC 7 cut(s) 395, 841, 924, 999, 1009, 1120, 1136
BspCNI CTCAG 1 cut(s) 30
BspDI ATCGAT 2 cut(s) 668, 980
BspFNI CGCG 3 cut(s) 1129, 1142, 1162
BspHI TCATGA 1 cut(s) 261
BspLI GGNNCC 6 cut(s) 34, 164, 864, 1071, 1135, 1136
BspMAI CTGCAG 1 cut(s) 67
BspPI GGATC 2 cut(s) 255, 780
BspT107I GGYRCC 2 cut(s) 32, 862
BsrDI GCAATG 1 cut(s) 366
BsrFI RCCGGY 3 cut(s) 865, 924, 1017
BsrI ACTGG 5 cut(s) 114, 137, 246, 383, 690
BssAI RCCGGY 3 cut(s) 865, 924, 1017
BssECI CCNNGG 3 cut(s) 510, 521, 660
BssMI GATC 7 cut(s) 67, 81, 187, 247, 343, 669, 785
BssNI GRCGYC 2 cut(s) 507, 1021
BssT1I CCWWGG 2 cut(s) 521, 660
Bst4CI ACNGT 3 cut(s) 224, 959, 1152
Bst6I CTCTTC 2 cut(s) 803, 885
BstACI GRCGYC 2 cut(s) 507, 1021
BstAPI GCANNNNNTGC 1 cut(s) 476
BstC8I GCNNGC 3 cut(s) 48, 871, 875
BstDEI CTNAG 2 cut(s) 38, 594
BstDSI CCRYGG 3 cut(s) 510, 521, 660
BstF5I GGATG 5 cut(s) 96, 304, 454, 642, 883
BstFNI CGCG 3 cut(s) 1129, 1142, 1162
BstHHI GCGC 3 cut(s) 1129, 1144, 1162
BstKTI GATC 7 cut(s) 70, 84, 190, 250, 346, 672, 788
BstMAI GTCTC 4 cut(s) 122, 185, 336, 1007
BstMBI GATC 7 cut(s) 67, 81, 187, 247, 343, 669, 785
BstMCI CGRYCG 2 cut(s) 925, 1000
BstMWI GCNNNNNNNGC 7 cut(s) 56, 104, 476, 930, 996, 1126, 1133
BstNSI RCATGY 1 cut(s) 386
BstPAI GACNNNNGTC 1 cut(s) 557
BstSCI CCNGG 1 cut(s) 759
BstSFI CTRYAG 4 cut(s) 63, 102, 898, 958
BstSLI GKGCMC 3 cut(s) 37, 865, 1138
BstUI CGCG 3 cut(s) 1129, 1142, 1162
BstV1I GCAGC 4 cut(s) 49, 71, 1074, 1131
BstX2I RGATCY 1 cut(s) 247
BstYI RGATCY 1 cut(s) 247
BstZI CGGCCG 2 cut(s) 922, 997
Bsu15I ATCGAT 2 cut(s) 668, 980
Bsu36I CCTNAGG 1 cut(s) 594
BsuRI GGCC 7 cut(s) 395, 841, 924, 999, 1009, 1120, 1136
BsuTUI ATCGAT 2 cut(s) 668, 980
BtgI CCRYGG 3 cut(s) 510, 521, 660
BtsCI GGATG 5 cut(s) 96, 304, 454, 642, 883
BtsI GCAGTG 1 cut(s) 474
BtsIMutI CAGTG 4 cut(s) 107, 474, 955, 1148
Cac8I GCNNGC 3 cut(s) 48, 871, 875
CciI TCATGA 1 cut(s) 261
CfoI GCGC 3 cut(s) 1129, 1144, 1162
Cfr10I RCCGGY 3 cut(s) 865, 924, 1017
Cfr13I GGNCC 2 cut(s) 1134, 1135
ClaI ATCGAT 2 cut(s) 668, 980
CseI GACGC 3 cut(s) 515, 562, 1010
CviAII CATG 5 cut(s) 262, 383, 445, 522, 661
DdeI CTNAG 2 cut(s) 38, 594
DpnI GATC 7 cut(s) 69, 83, 189, 249, 345, 671, 787
DpnII GATC 7 cut(s) 67, 81, 187, 247, 343, 669, 785
DraI TTTAAA 1 cut(s) 238
DraIII CACNNNGTG 1 cut(s) 516
EaeI YGGCCR 4 cut(s) 839, 922, 997, 1007
EagI CGGCCG 2 cut(s) 922, 997
Eam1104I CTCTTC 2 cut(s) 803, 885
EarI CTCTTC 2 cut(s) 803, 885
EciI GGCGGA 1 cut(s) 666
Ecl136II GAGCTC 1 cut(s) 933
EclXI CGGCCG 2 cut(s) 922, 997
Eco130I CCWWGG 2 cut(s) 521, 660
Eco24I GRGCYC 3 cut(s) 935, 1074, 1138
Eco52I CGGCCG 2 cut(s) 922, 997
Eco53kI GAGCTC 1 cut(s) 933
Eco81I CCTNAGG 1 cut(s) 594
EcoICRI GAGCTC 1 cut(s) 933
EcoO109I RGGNCCY 1 cut(s) 1134
EcoT14I CCWWGG 2 cut(s) 521, 660
EcoT38I GRGCYC 3 cut(s) 935, 1074, 1138
ErhI CCWWGG 2 cut(s) 521, 660
Esp3I CGTCTC 1 cut(s) 1007
FaeI CATG 5 cut(s) 265, 386, 448, 525, 664
FatI CATG 5 cut(s) 261, 382, 444, 521, 660
FauI CCCGC 1 cut(s) 539
FblI GTMKAC 1 cut(s) 133
Fnu4HI GCNGC 5 cut(s) 60, 63, 1088, 1118, 1145
FokI GGATG 5 cut(s) 103, 311, 461, 649, 870
FriOI GRGCYC 3 cut(s) 935, 1074, 1138
Fsp4HI GCNGC 5 cut(s) 60, 63, 1088, 1118, 1145
FspBI CTAG 3 cut(s) 87, 228, 557
GlaI GCGC 3 cut(s) 1128, 1143, 1161
GluI GCNGC 5 cut(s) 60, 63, 1088, 1118, 1145
GsaI CCCAGC 1 cut(s) 159
GsuI CTGGAG 1 cut(s) 263
HaeIII GGCC 7 cut(s) 395, 841, 924, 999, 1009, 1120, 1136
HgaI GACGC 3 cut(s) 515, 562, 1010
HhaI GCGC 3 cut(s) 1129, 1144, 1162
Hin1I GRCGYC 2 cut(s) 507, 1021
Hin1II CATG 5 cut(s) 265, 386, 448, 525, 664
Hin6I GCGC 3 cut(s) 1127, 1142, 1160
HinP1I GCGC 3 cut(s) 1127, 1142, 1160
HincII GTYRAC 1 cut(s) 562
HindII GTYRAC 1 cut(s) 562
HinfI GANTC 8 cut(s) 329, 352, 389, 575, 665, 706, 855, 992
HphI GGTGA 2 cut(s) 439, 1047
Hpy166II GTNNAC 4 cut(s) 134, 562, 622, 955
Hpy188I TCNGA 4 cut(s) 491, 823, 937, 1110
Hpy188III TCNNGA 6 cut(s) 14, 121, 262, 335, 572, 1044
Hpy8I GTNNAC 4 cut(s) 134, 562, 622, 955
Hpy99I CGWCG 3 cut(s) 556, 854, 1026
HpyAV CCTTC 4 cut(s) 176, 825, 1020, 1084
HpyCH4III ACNGT 3 cut(s) 224, 959, 1152
HpyCH4V TGCA 3 cut(s) 59, 65, 433
HpyF10VI GCNNNNNNNGC 7 cut(s) 56, 104, 476, 930, 996, 1126, 1133
HpyF3I CTNAG 2 cut(s) 38, 594
Hsp92I GRCGYC 2 cut(s) 507, 1021
Hsp92II CATG 5 cut(s) 265, 386, 448, 525, 664
HspAI GCGC 3 cut(s) 1127, 1142, 1160
Kzo9I GATC 7 cut(s) 67, 81, 187, 247, 343, 669, 785
LmnI GCTCC 3 cut(s) 817, 930, 1069
Lsp1109I GCAGC 4 cut(s) 49, 71, 1074, 1131
LweI GCATC 1 cut(s) 420
MaeI CTAG 3 cut(s) 87, 228, 557
MaeIII GTNAC 2 cut(s) 503, 890
MalI GATC 7 cut(s) 69, 83, 189, 249, 345, 671, 787
MboI GATC 7 cut(s) 67, 81, 187, 247, 343, 669, 785
MboII GAAGA 7 cut(s) 242, 272, 329, 350, 790, 820, 872
MfeI CAATTG 1 cut(s) 436
MflI RGATCY 1 cut(s) 247
MhlI GDGCHC 5 cut(s) 37, 865, 935, 1074, 1138
MlyI GAGTC 2 cut(s) 338, 398
MroXI GAANNNNTTC 1 cut(s) 1051
MseI TTAA 1 cut(s) 237
MslI CAYNNNNRTG 3 cut(s) 89, 112, 293
MspA1I CMGCKG 1 cut(s) 62
MspR9I CCNGG 1 cut(s) 761
MssI GTTTAAAC 1 cut(s) 238
MunI CAATTG 1 cut(s) 436
Mva1269I GAATGC 1 cut(s) 48
MvnI CGCG 3 cut(s) 1129, 1142, 1162
MwoI GCNNNNNNNGC 7 cut(s) 56, 104, 476, 930, 996, 1126, 1133
NciI CCSGG 1 cut(s) 761
NcoI CCATGG 2 cut(s) 521, 660
NdeII GATC 7 cut(s) 67, 81, 187, 247, 343, 669, 785
NlaIII CATG 5 cut(s) 265, 386, 448, 525, 664
NlaIV GGNNCC 6 cut(s) 34, 164, 864, 1071, 1135, 1136
NmeAIII GCCGAG 1 cut(s) 900
NmuCI GTSAC 2 cut(s) 503, 890
NspI RCATGY 1 cut(s) 386
PagI TCATGA 1 cut(s) 261
PctI GAATGC 1 cut(s) 48
PdmI GAANNNNTTC 1 cut(s) 1051
PfeI GAWTC 6 cut(s) 352, 575, 665, 706, 855, 992
PflMI CCANNNNNTGG 2 cut(s) 527, 1097
PkrI GCNGC 5 cut(s) 61, 64, 1089, 1119, 1146
PleI GAGTC 2 cut(s) 337, 397
PmeI GTTTAAAC 1 cut(s) 238
PpsI GAGTC 2 cut(s) 337, 397
PshAI GACNNNNGTC 1 cut(s) 557
Psp124BI GAGCTC 1 cut(s) 935
PspFI CCCAGC 1 cut(s) 155
PspN4I GGNNCC 6 cut(s) 34, 164, 864, 1071, 1135, 1136
PspOMI GGGCCC 1 cut(s) 1134
PspPI GGNCC 2 cut(s) 1134, 1135
PstI CTGCAG 1 cut(s) 67
PsuI RGATCY 1 cut(s) 247
PvuII CAGCTG 1 cut(s) 62
RseI CAYNNNNRTG 3 cut(s) 89, 112, 293
SacI GAGCTC 1 cut(s) 935
SaqAI TTAA 1 cut(s) 237
SatI GCNGC 5 cut(s) 60, 63, 1088, 1118, 1145
Sau3AI GATC 7 cut(s) 67, 81, 187, 247, 343, 669, 785
Sau96I GGNCC 2 cut(s) 1134, 1135
SchI GAGTC 2 cut(s) 338, 398
ScrFI CCNGG 1 cut(s) 761
SduI GDGCHC 5 cut(s) 37, 865, 935, 1074, 1138
SfaNI GCATC 1 cut(s) 420
SfcI CTRYAG 4 cut(s) 63, 102, 898, 958
SmiMI CAYNNNNRTG 3 cut(s) 89, 112, 293
SmlI CTYRAG 2 cut(s) 119, 333
SmoI CTYRAG 2 cut(s) 119, 333
SsiI CCGC 4 cut(s) 546, 651, 913, 1117
SspI AATATT 1 cut(s) 128
SspMI CTAG 3 cut(s) 87, 228, 557
SstI GAGCTC 1 cut(s) 935
StyD4I CCNGG 1 cut(s) 759
StyI CCWWGG 2 cut(s) 521, 660
TaaI ACNGT 3 cut(s) 224, 959, 1152
TaqI TCGA 6 cut(s) 253, 453, 668, 801, 980, 1024
TauI GCSGC 1 cut(s) 1120
TfiI GAWTC 6 cut(s) 352, 575, 665, 706, 855, 992
Tru1I TTAA 1 cut(s) 237
Tru9I TTAA 1 cut(s) 237
TscAI CASTG 4 cut(s) 114, 481, 962, 1155
TseFI GTSAC 2 cut(s) 503, 890
TseI GCWGC 4 cut(s) 59, 62, 1087, 1144
Tsp45I GTSAC 2 cut(s) 503, 890
TspDTI ATGAA 4 cut(s) 272, 365, 702, 872
TspGWI ACGGA 1 cut(s) 867
TspRI CASTG 4 cut(s) 114, 481, 962, 1155
Van91I CCANNNNNTGG 2 cut(s) 527, 1097
XapI RAATTY 3 cut(s) 320, 1050, 1094
XceI RCATGY 1 cut(s) 386
XmiI GTMKAC 1 cut(s) 133
XmnI GAANNNNTTC 1 cut(s) 1051
XspI CTAG 3 cut(s) 87, 228, 557
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.