Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0005600

Physical Location & Seq

Genomic Coordinates Forward (+)

21795080 .. 21800220

Gene Structure 5141 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

ATGGCTGCAAAGAACCTGGAGAAGATGGCTTCGATTGACGTCCAGCTGAGGCTGCTGGCACCTGGGAAGGTCTCTGAGGATGACAAACTGATTGAGTACGATGCTCTGCTGTTGGATCGTTTTCTTGATATTCTTCAGGATTTACATGGAGAGAGTCTCAGAGAAACGGTGCAAGATTGTTATGAGCTTTCTGCGGAATATGAAAGAAAGCAGGACCCTCAAAAGTTGGCGGAACTTGGGAATGTGCTAACGAGTTTGGATCCCGGGGACTCCATAGTCATTGCTAAATCCTTTTCTCACATGCTTAACTTGGCCAATTTGGCCGAGGAAGTTCAGATTGCCTACCGGAGGAGGATCAAGATGAAGAAGAAGGGAGATTTTGCTGATGAGGCTTCAGCTACTACGGAGTCAGACATTGAAGAGACTCTCAAGAGGCTTGTGGGGGACCTGAAAAAGTCCCCAGAAGAAGTTTTTGATGCCTTGAAGAACCAGACTGTAGATTTGGTATTCACTGCACATCCTACTCAGTCTGACATTACGCCTGATGATAAGCAGGAACTCGATGAGTCTTTACAAAGGGAGATTCAAGCTGCATTTCGTACAGATGAAATCCGAAGGACTCCCCCAACCCCTCAAGATGAGATGAGGGCAGGAATGAGCTACTTCCATGAGACAATTTGGAAAGGCGTACCGAAATTCTTACGTCGTGTTGACACTGCTTTGAAGAACATAGGGATAAATGAACGTGTTCCTTACAATGCCCCTCTCATTCAGTTTTCTTCTTGGATAGGTGGCGATCGTGATGGAAACCCCAGGGTCACTCCTGAAGTTACTCGGGATGTGTGCTTATTGGCTAGAATGATGGCTGCTAACTTATACTTCTCCCAGATAGAGGATCTTATGTTTGAGTTATCCATGTGGCGATGCAATGATGAGCTTCGTGCTCGTGCTCATGAACTTCATAGGTCTTCAAAGAAGGATGCGAAACACTACATAGAGTTTTGGAAACAAATTCCTCCAAATGAGCCTTATCGAGTTATTCTTGGAGATGTAAGAGACAAGCTTTACAATACACGTGAACGTGCTCGCCAATTATTAGCCAATGGAGTCTCTGACATTCCCGAGGACACAACGTTTACCAATGTTGAACAGATAATTTCTGGAGCCTCTCGAACTTTGTTACCGGTCACTCTGCTCCTGTGGCGATCGATCTGCAACACGGCAATTGCTGATGGAAGCCTTCTTGATTTCTTACGGCAAGTTTCTACTTTTGGGCTGTCTCTTGTGAGACTAGACATACGACAAGAATCAGACAGGCACACTGATGTCCTCAATGCTATAACAAAGCACTTGGAGATAGGATCTTATCGAGAATGGTCTGAGGAGCGTAGGCAAGAATGGCTCTTGTCTGAGCTTCGTGGCAAGCGCCCCCTTTTTGGCGCTGATGTTCCCAAGACTGAAGAAATTGCTGATGTGCTGGACACGTTCCATGTCATTGCAGAACTTCCCTCAGACAATTTTGGTGCTTATATTATATCAATGGCAACATCCCCATCTGATGTTCTCGCTGTTGAGCTTTTACAACGTGAATGTGGTGTGAAGGAGCCACTAAGGGTTGTTCCATTGTTTGAGAAGCTTGCTGATCTTGAGGCTGCTCCTGCTGCTGTGGCTCGTCTCTTTTCTATAGACTGGTACAAAAACCGGATCAATGGGAAGCAAGAAGTCATGATAGGGTACTCAGATTCCGGAAAGGATGCTGGTCGTCTATCTGCAGCATGGCAGTTATACAAGGCTCAGGAAGAGCTCGTAAAGGTCGCAAAAAAATTTGGGATTAAGCTTACAATGTTTCATGGTCGAGGTGGAACAGTTGGAAGAGGAGGAGGGCCCACCCATCTTGCTATATTGTCTCAGCCACCCGACACTATTCATGGTTCGCTTCGTGTTACAGTTCAAGGTGAAGTTATTGAACAATCATTTGGGGAGGAGCACTTGTGCTTTAGAACACTCCAGCGTTTCACAGCGGCCACGCTTGAGCATGGAATGCGCCCTCCCGTCTCCCCAAAGCCAGAATGGCGTGCACTCATGGATGAAATGGGCGTCATTGCAACAGAGGAATATCGGTCAATAGTTTTCCAGGAGCCCCGTTTTGTTGAATACTTTCGCCTCGCAACACCAGAGATGGAGTACGGTCGAATGAACATTGGGAGTCGTCCTTCAAAACGAAAGCCAAGTGGAGGCATTGAATCACTTCGTGCAATCCCATGGATCTTTGCTTGGACCCAGACAAGATTTCACTTACCAGTGTGGCTTGGCTTTGGGGCAGCATTTAAGCATGTTATTGAGAAGGATGCGAAGAGTCTCCAAATGCTTCGGGAGATGTATAATCAGTGGCCTTTCTTCAGAGTCACAATTGATTTAATTGAGATGGTGTTTGCCAAGGGTGATCCCGGTATTGCCTCTCTGTATGACAAGCTTCTCGTGTCAGAAGACCTATGGTCATTTGGAGACCGATTGAGGGCCAACTATGAACAAACTAAGCTCCTCGTCCTCCAGGTTGCTGGACATAAGGCTCTTCTGGAAGGAGATCCCTACTTGAGGCAGCGACTCCTCCTTCGTGATTCATACATCACAACACTTAATGTGTGCCAAGCCTATACACTGAAGCAAATTCGTGATCCAAACTACCATGTCAAAGTAAGGCCTTATTTGTCGTCGGAGTACATGGAAACAACCACCAAGCCGGCAGCAGAGCTTGTGAAACTCAATCCAACGAGCGAGTATGCTCCTGGTCTGGAAGACACTCTAATCCTGACCATGAAGGGTATTGCTGCTGGTATGCAGAACACCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0008152 GO:0008964 GO:0009506 GO:0009507 GO:0009536 GO:0015977 GO:0016020 GO:0016829 GO:0016830 GO:0016831 GO:0030054 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0055044 GO:0071704 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

951

Amino Acids

108.06

Weight (kDa)

5.79

Isoelectric Point (pI)

44.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPcase	PF00311	34 - 950	0.0	Phosphoenolpyruvate carboxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42600 AT2G42600 AT2G42600
fragaria_vesca	FvH4_6g27390 FvH4_6g27390 FvH4_6g27390 FvH4_6g33320
malus_domestica	MD09G1237900.v1.1 MD17G1230800.v1.1
prunus_persica	Prupe.3G118300_v2.0.a1
pyrus_communis	pycom09g15640 pycom17g23400
rosa_chinensis	RchiOBHm_Chr2g0090101 RchiOBHm_Chr2g0129661
rosa_laevigata	RLG00000016085 RLG00000019094
rosa_multiflora	Rmu_sc0008968.1_g000006 Rmu_sc0009263.1_g000005 Rmu_sc0020548.1_g000003
rosa_roxburghii	Rroxscaffold_2G00114470
rosa_rugosa	Rorug02G0005300 Rorug02G0288200
rosa_samantha	Rh2AG339500 Rh2BG348300 Rh2CG326900 Rh2DG366400
rosa_wichuraiana	Rw2G004560 Rw2G027850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	275
AatII	GACGTC	1 cut(s)	42
AccB1I	GGYRCC	1 cut(s)	58
AccIII	TCCGGA	1 cut(s)	1745
AciI	CCGC	3 cut(s)	194, 230, 2021
AclI	AACGTT	1 cut(s)	1133
AcoI	YGGCCR	3 cut(s)	312, 321, 2022
AcsI	RAATTY	4 cut(s)	695, 1011, 1823, 2667
AcuI	CTGAAG	6 cut(s)	119, 378, 846, 1479, 2383, 2681
AcvI	CACGTG	1 cut(s)	1076
AcyI	GRCGYC	2 cut(s)	39, 2097
AdeI	CACNNNGTG	1 cut(s)	2252
AfaI	GTAC	7 cut(s)	98, 601, 690, 1694, 1736, 2186, 2720
AfiI	CCNNNNNNNGG	6 cut(s)	348, 892, 1436, 2234, 2515, 2595
AflIII	ACRYGT	3 cut(s)	745, 1073, 1482
AgeI	ACCGGT	2 cut(s)	1183, 2846
AhdI	GACNNNNNGTC	1 cut(s)	2494
AjnI	CCWGG	6 cut(s)	15, 61, 812, 2133, 2550, 2785
AjuI	GAANNNNNNNTTGG	2 cut(s)	1959, 1991
Alw21I	GWGCWC	6 cut(s)	946, 952, 1087, 1806, 1989, 2080
Alw44I	GTGCAC	1 cut(s)	2076
Ama87I	CYCGRG	3 cut(s)	263, 834, 1121
Aor13HI	TCCGGA	1 cut(s)	1745
AoxI	GGCC	7 cut(s)	312, 321, 1883, 2022, 2390, 2517, 2699
ApaI	GGGCCC	1 cut(s)	1887
ApaLI	GTGCAC	1 cut(s)	2076
ApoI	RAATTY	4 cut(s)	695, 1011, 1823, 2667
ArsI	GACNNNNNNTTYG	4 cut(s)	484, 516, 2595, 2627
AsiGI	ACCGGT	2 cut(s)	1183, 2846
Asp700I	GAANNNNTTC	3 cut(s)	747, 2157, 2247
AspLEI	GCGC	3 cut(s)	1428, 1442, 2046
AspS9I	GGNCC	6 cut(s)	214, 445, 1883, 1884, 2277, 2517
AsuC2I	CCSGG	3 cut(s)	264, 265, 2448
AsuHPI	GGTGA	2 cut(s)	1967, 2453
AvaI	CYCGRG	3 cut(s)	263, 834, 1121
AvaII	GGWCC	3 cut(s)	214, 445, 2277
BaeGI	GKGCMC	2 cut(s)	1887, 2080
BalI	TGGCCA	1 cut(s)	314
BamHI	GGATCC	1 cut(s)	259
BanI	GGYRCC	1 cut(s)	58
BanII	GRGCYC	3 cut(s)	1806, 1887, 2142
BauI	CACGAG	2 cut(s)	945, 2477
BbrPI	CACGTG	1 cut(s)	1076
BbsI	GAAGAC	3 cut(s)	960, 2493, 2802
Bbv12I	GWGCWC	6 cut(s)	946, 952, 1087, 1806, 1989, 2080
BbvCI	CCTCAGC	1 cut(s)	47
BccI	CCATC	8 cut(s)	19, 797, 856, 1226, 1561, 1899, 2173, 2419
BceAI	ACGGC	2 cut(s)	1236, 1271
BcgI	CGANNNNNNTGC	2 cut(s)	1194, 1228
BciT130I	CCWGG	6 cut(s)	17, 63, 814, 2135, 2552, 2787
BcnI	CCSGG	3 cut(s)	264, 265, 2448
BfaI	CTAG	2 cut(s)	855, 1292
BfmI	CTRYAG	3 cut(s)	495, 1683, 1770
BfoI	RGCGCY	2 cut(s)	1429, 1443
BglI	GCCNNNNNGGC	2 cut(s)	320, 2071
Bme1390I	CCNGG	9 cut(s)	17, 63, 264, 265, 814, 2135, 2448, 2552, 2787
Bme18I	GGWCC	3 cut(s)	214, 445, 2277
BmeRI	GACNNNNNGTC	1 cut(s)	2494
BmeT110I	CYCGRG	3 cut(s)	263, 834, 1121
BmgT120I	GGNCC	6 cut(s)	214, 445, 1883, 1884, 2277, 2517
BmiI	GGNNCC	9 cut(s)	60, 216, 261, 446, 1165, 1605, 1885, 2139, 2279
BmrFI	CCNGG	9 cut(s)	17, 63, 264, 265, 814, 2135, 2448, 2552, 2787
BmsI	GCATC	6 cut(s)	91, 466, 914, 970, 1744, 2338
BpiI	GAAGAC	3 cut(s)	960, 2493, 2802
BplI	GAGNNNNNCTC	2 cut(s)	141, 173
BpmI	CTGGAG	4 cut(s)	38, 1182, 1991, 2534
Bpu10I	CCTNAGC	2 cut(s)	47, 1794
BpuEI	CTTGAG	5 cut(s)	413, 618, 1667, 2051, 2614
BpuMI	CCSGG	3 cut(s)	264, 265, 2448
Bsa29I	ATCGAT	1 cut(s)	1208
BsaAI	YACGTR	1 cut(s)	1076
BsaHI	GRCGYC	2 cut(s)	39, 2097
BsaI	GGTCTC	2 cut(s)	76, 2499
BsaJI	CCNNGG	9 cut(s)	62, 263, 264, 324, 812, 813, 1122, 2261, 2436
BsaWI	WCCGGW	5 cut(s)	345, 1183, 1701, 1745, 2846
BsaXI	ACNNNNNCTCC	2 cut(s)	1976, 2006
Bsc4I	CCNNNNNNNGG	6 cut(s)	348, 892, 1436, 2234, 2515, 2595
Bse118I	RCCGGY	3 cut(s)	1183, 2740, 2846
Bse1I	ACTGG	2 cut(s)	1694, 2300
Bse3DI	GCAATG	4 cut(s)	279, 934, 1494, 2100
BseAI	TCCGGA	1 cut(s)	1745
BseBI	CCWGG	6 cut(s)	17, 63, 814, 2135, 2552, 2787
BseCI	ATCGAT	1 cut(s)	1208
BseDI	CCNNGG	9 cut(s)	62, 263, 264, 324, 812, 813, 1122, 2261, 2436
BseGI	GGATG	8 cut(s)	85, 517, 844, 985, 1547, 1759, 2092, 2353
BseLI	CCNNNNNNNGG	6 cut(s)	348, 892, 1436, 2234, 2515, 2595
BseMI	GCAATG	4 cut(s)	279, 934, 1494, 2100
BseNI	ACTGG	2 cut(s)	1694, 2300
BseRI	GAGGAG	7 cut(s)	364, 1397, 1890, 1893, 1997, 2531, 2597
BseSI	GKGCMC	2 cut(s)	1887, 2080
BsgI	GTGCAG	1 cut(s)	498
Bsh1285I	CGRYCG	3 cut(s)	799, 1208, 2191
BshFI	GGCC	7 cut(s)	314, 323, 1885, 2024, 2392, 2519, 2701
BshNI	GGYRCC	1 cut(s)	58
BshTI	ACCGGT	2 cut(s)	1183, 2846
BshVI	ATCGAT	1 cut(s)	1208
BsiEI	CGRYCG	3 cut(s)	799, 1208, 2191
BsiHKAI	GWGCWC	6 cut(s)	946, 952, 1087, 1806, 1989, 2080
BsiHKCI	CYCGRG	3 cut(s)	263, 834, 1121
BsiSI	CCGG	8 cut(s)	264, 346, 1184, 1702, 1746, 2448, 2741, 2847
BslFI	GGGAC	3 cut(s)	281, 442, 458
BslI	CCNNNNNNNGG	6 cut(s)	348, 892, 1436, 2234, 2515, 2595
BsmBI	CGTCTC	2 cut(s)	1679, 2059
BsmFI	GGGAC	3 cut(s)	281, 442, 458
BsmI	GAATGC	1 cut(s)	2046
BsnI	GGCC	7 cut(s)	314, 323, 1885, 2024, 2392, 2519, 2701
Bso31I	GGTCTC	2 cut(s)	76, 2499
BsoBI	CYCGRG	3 cut(s)	263, 834, 1121
Bsp120I	GGGCCC	1 cut(s)	1883
Bsp1286I	GDGCHC	8 cut(s)	946, 952, 1087, 1806, 1887, 1989, 2080, 2142
Bsp13I	TCCGGA	1 cut(s)	1745
Bsp19I	CCATGG	1 cut(s)	2261
BspACI	CCGC	3 cut(s)	194, 230, 2021
BspANI	GGCC	7 cut(s)	314, 323, 1885, 2024, 2392, 2519, 2701
BspDI	ATCGAT	1 cut(s)	1208
BspEI	TCCGGA	1 cut(s)	1745
BspHI	TCATGA	2 cut(s)	952, 1725
BspLI	GGNNCC	9 cut(s)	60, 216, 261, 446, 1165, 1605, 1885, 2139, 2279
BspMAI	CTGCAG	1 cut(s)	1774
BspQI	GCTCTTC	2 cut(s)	1794, 2577
BspT107I	GGYRCC	1 cut(s)	58
BspTNI	GGTCTC	2 cut(s)	76, 2499
BsrDI	GCAATG	4 cut(s)	279, 934, 1494, 2100
BsrFI	RCCGGY	3 cut(s)	1183, 2740, 2846
BsrI	ACTGG	2 cut(s)	1694, 2300
BssAI	RCCGGY	3 cut(s)	1183, 2740, 2846
BssECI	CCNNGG	9 cut(s)	62, 263, 264, 324, 812, 813, 1122, 2261, 2436
BssNI	GRCGYC	2 cut(s)	39, 2097
BssSI	CACGAG	2 cut(s)	945, 2477
BssT1I	CCWWGG	2 cut(s)	2261, 2436
Bst2BI	CACGAG	2 cut(s)	945, 2477
Bst2UI	CCWGG	6 cut(s)	17, 63, 814, 2135, 2552, 2787
Bst4CI	ACNGT	5 cut(s)	169, 496, 1867, 1948, 2189
Bst6I	CTCTTC	5 cut(s)	414, 1794, 1867, 2348, 2577
BstACI	GRCGYC	2 cut(s)	39, 2097
BstAPI	GCANNNNNTGC	1 cut(s)	2041
BstBAI	YACGTR	1 cut(s)	1076
BstC8I	GCNNGC	6 cut(s)	57, 1087, 1424, 1638, 2076, 2742
BstDSI	CCRYGG	1 cut(s)	2261
BstENI	CCTNNNNNAGG	2 cut(s)	346, 2593
BstF5I	GGATG	8 cut(s)	85, 517, 844, 985, 1547, 1759, 2092, 2353
BstH2I	RGCGCY	2 cut(s)	1429, 1443
BstHHI	GCGC	3 cut(s)	1428, 1442, 2046
BstMCI	CGRYCG	3 cut(s)	799, 1208, 2191
BstNI	CCWGG	6 cut(s)	17, 63, 814, 2135, 2552, 2787
BstNSI	RCATGY	2 cut(s)	304, 2336
BstSCI	CCNGG	9 cut(s)	15, 61, 262, 263, 812, 2133, 2446, 2550, 2785
BstSFI	CTRYAG	3 cut(s)	495, 1683, 1770
BstSLI	GKGCMC	2 cut(s)	1887, 2080
BstV2I	GAAGAC	3 cut(s)	960, 2493, 2802
BstX2I	RGATCY	5 cut(s)	259, 895, 1361, 2265, 2584
BstXI	CCANNNNNNTGG	1 cut(s)	2558
BstYI	RGATCY	5 cut(s)	259, 895, 1361, 2265, 2584
Bsu15I	ATCGAT	1 cut(s)	1208
BsuRI	GGCC	7 cut(s)	314, 323, 1885, 2024, 2392, 2519, 2701
BsuTUI	ATCGAT	1 cut(s)	1208
BtgI	CCRYGG	1 cut(s)	2261
BtgZI	GCGATG	1 cut(s)	937
BtsCI	GGATG	8 cut(s)	85, 517, 844, 985, 1547, 1759, 2092, 2353
BtsI	GCAGTG	2 cut(s)	510, 714
BtsIMutI	CAGTG	6 cut(s)	510, 714, 1320, 2307, 2393, 2657
Cac8I	GCNNGC	6 cut(s)	57, 1087, 1424, 1638, 2076, 2742
CciI	TCATGA	2 cut(s)	952, 1725
CfoI	GCGC	3 cut(s)	1428, 1442, 2046
Cfr10I	RCCGGY	3 cut(s)	1183, 2740, 2846
Cfr13I	GGNCC	6 cut(s)	214, 445, 1883, 1884, 2277, 2517
Cfr9I	CCCGGG	1 cut(s)	263
ClaI	ATCGAT	1 cut(s)	1208
CseI	GACGC	1 cut(s)	2086
Csp6I	GTAC	7 cut(s)	97, 600, 689, 1693, 1735, 2185, 2719
CspAI	ACCGGT	2 cut(s)	1183, 2846
CspCI	CAANNNNNGTGG	2 cut(s)	1876, 1911
CviQI	GTAC	7 cut(s)	97, 600, 689, 1693, 1735, 2185, 2719
DraIII	CACNNNGTG	1 cut(s)	2252
DrdI	GACNNNNNNGTC	1 cut(s)	275
DriI	GACNNNNNGTC	1 cut(s)	2494
DseDI	GACNNNNNNGTC	1 cut(s)	275
EaeI	YGGCCR	3 cut(s)	312, 321, 2022
Eam1104I	CTCTTC	5 cut(s)	414, 1794, 1867, 2348, 2577
Eam1105I	GACNNNNNGTC	1 cut(s)	2494
EarI	CTCTTC	5 cut(s)	414, 1794, 1867, 2348, 2577
EciI	GGCGGA	1 cut(s)	245
Ecl136II	GAGCTC	1 cut(s)	1804
Eco130I	CCWWGG	2 cut(s)	2261, 2436
Eco147I	AGGCCT	1 cut(s)	2701
Eco24I	GRGCYC	3 cut(s)	1806, 1887, 2142
Eco31I	GGTCTC	2 cut(s)	76, 2499
Eco47I	GGWCC	3 cut(s)	214, 445, 2277
Eco53kI	GAGCTC	1 cut(s)	1804
Eco57I	CTGAAG	6 cut(s)	119, 378, 846, 1479, 2383, 2681
Eco72I	CACGTG	1 cut(s)	1076
Eco88I	CYCGRG	3 cut(s)	263, 834, 1121
EcoICRI	GAGCTC	1 cut(s)	1804
EcoNI	CCTNNNNNAGG	2 cut(s)	346, 2593
EcoO109I	RGGNCCY	3 cut(s)	214, 445, 1883
EcoRII	CCWGG	6 cut(s)	15, 61, 812, 2133, 2550, 2785
EcoT14I	CCWWGG	2 cut(s)	2261, 2436
EcoT38I	GRGCYC	3 cut(s)	1806, 1887, 2142
ErhI	CCWWGG	2 cut(s)	2261, 2436
Esp3I	CGTCTC	2 cut(s)	1679, 2059
FaqI	GGGAC	3 cut(s)	281, 442, 458
FokI	GGATG	8 cut(s)	92, 504, 851, 992, 1534, 1766, 2099, 2360
FriOI	GRGCYC	3 cut(s)	1806, 1887, 2142
FspBI	CTAG	2 cut(s)	855, 1292
GlaI	GCGC	3 cut(s)	1427, 1441, 2045
GsuI	CTGGAG	4 cut(s)	38, 1182, 1991, 2534
HaeII	RGCGCY	2 cut(s)	1429, 1443
HaeIII	GGCC	7 cut(s)	314, 323, 1885, 2024, 2392, 2519, 2701
HapII	CCGG	8 cut(s)	264, 346, 1184, 1702, 1746, 2448, 2741, 2847
HgaI	GACGC	1 cut(s)	2086
HhaI	GCGC	3 cut(s)	1428, 1442, 2046
Hin1I	GRCGYC	2 cut(s)	39, 2097
Hin6I	GCGC	3 cut(s)	1426, 1440, 2044
HinP1I	GCGC	3 cut(s)	1426, 1440, 2044
HincII	GTYRAC	1 cut(s)	712
HindII	GTYRAC	1 cut(s)	712
HindIII	AAGCTT	4 cut(s)	1061, 1634, 1835, 2471
HpaII	CCGG	8 cut(s)	264, 346, 1184, 1702, 1746, 2448, 2741, 2847
HphI	GGTGA	2 cut(s)	1967, 2453
Hpy166II	GTNNAC	4 cut(s)	712, 1079, 1137, 2078
Hpy8I	GTNNAC	4 cut(s)	712, 1079, 1137, 2078
Hpy99I	CGWCG	2 cut(s)	708, 2716
HpyCH4III	ACNGT	5 cut(s)	169, 496, 1867, 1948, 2189
HpyCH4IV	ACGT	8 cut(s)	39, 703, 745, 1075, 1081, 1133, 1484, 1585
HpySE526I	ACGT	8 cut(s)	39, 703, 745, 1075, 1081, 1133, 1484, 1585
Hsp92I	GRCGYC	2 cut(s)	39, 2097
HspAI	GCGC	3 cut(s)	1426, 1440, 2044
Kpn2I	TCCGGA	1 cut(s)	1745
KroI	GCCGGC	1 cut(s)	2740
KroNI	GCCGGC	1 cut(s)	2742
LguI	GCTCTTC	2 cut(s)	1794, 2577
LmnI	GCTCC	9 cut(s)	1163, 1200, 1384, 1603, 1660, 1984, 2137, 2544, 2788
LweI	GCATC	6 cut(s)	91, 466, 914, 970, 1744, 2338
MaeI	CTAG	2 cut(s)	855, 1292
MaeII	ACGT	8 cut(s)	39, 703, 745, 1075, 1081, 1133, 1484, 1585
MaeIII	GTNAC	6 cut(s)	817, 829, 1179, 1186, 1942, 2404
MfeI	CAATTG	2 cut(s)	1224, 2409
MflI	RGATCY	5 cut(s)	259, 895, 1361, 2265, 2584
MhlI	GDGCHC	8 cut(s)	946, 952, 1087, 1806, 1887, 1989, 2080, 2142
MlsI	TGGCCA	1 cut(s)	314
MluNI	TGGCCA	1 cut(s)	314
MmeI	TCCRAC	4 cut(s)	93, 1849, 2694, 2792
Mox20I	TGGCCA	1 cut(s)	314
MroI	TCCGGA	1 cut(s)	1745
MroNI	GCCGGC	1 cut(s)	2740
MroXI	GAANNNNTTC	3 cut(s)	747, 2157, 2247
MscI	TGGCCA	1 cut(s)	314
MseI	TTAA	5 cut(s)	306, 1833, 2328, 2417, 2637
MslI	CAYNNNNRTG	1 cut(s)	1323
Msp20I	TGGCCA	1 cut(s)	314
MspA1I	CMGCKG	2 cut(s)	46, 2021
MspI	CCGG	8 cut(s)	264, 346, 1184, 1702, 1746, 2448, 2741, 2847
MspR9I	CCNGG	9 cut(s)	17, 63, 264, 265, 814, 2135, 2448, 2552, 2787
MunI	CAATTG	2 cut(s)	1224, 2409
Mva1269I	GAATGC	1 cut(s)	2046
MvaI	CCWGG	6 cut(s)	17, 63, 814, 2135, 2552, 2787
NaeI	GCCGGC	1 cut(s)	2742
NciI	CCSGG	3 cut(s)	264, 265, 2448
NcoI	CCATGG	1 cut(s)	2261
NgoMIV	GCCGGC	1 cut(s)	2740
NlaIV	GGNNCC	9 cut(s)	60, 216, 261, 446, 1165, 1605, 1885, 2139, 2279
NmeAIII	GCCGAG	1 cut(s)	349
NmuCI	GTSAC	3 cut(s)	817, 1186, 2404
NspI	RCATGY	2 cut(s)	304, 2336
PagI	TCATGA	2 cut(s)	952, 1725
PasI	CCCWGGG	1 cut(s)	813
PceI	AGGCCT	1 cut(s)	2701
PciSI	GCTCTTC	2 cut(s)	1794, 2577
PctI	GAATGC	1 cut(s)	2046
PdiI	GCCGGC	1 cut(s)	2742
PdmI	GAANNNNTTC	3 cut(s)	747, 2157, 2247
PfeI	GAWTC	5 cut(s)	583, 1307, 1742, 2243, 2618
PfoI	TCCNGGA	1 cut(s)	2133
PinAI	ACCGGT	2 cut(s)	1183, 2846
Ple19I	CGATCG	2 cut(s)	799, 1208
PmaCI	CACGTG	1 cut(s)	1076
PmlI	CACGTG	1 cut(s)	1076
Ppu21I	YACGTR	1 cut(s)	1076
PpuMI	RGGWCCY	2 cut(s)	214, 445
Psp124BI	GAGCTC	1 cut(s)	1806
Psp1406I	AACGTT	1 cut(s)	1133
Psp5II	RGGWCCY	2 cut(s)	214, 445
Psp6I	CCWGG	6 cut(s)	15, 61, 812, 2133, 2550, 2785
PspCI	CACGTG	1 cut(s)	1076
PspGI	CCWGG	6 cut(s)	15, 61, 812, 2133, 2550, 2785
PspN4I	GGNNCC	9 cut(s)	60, 216, 261, 446, 1165, 1605, 1885, 2139, 2279
PspOMI	GGGCCC	1 cut(s)	1883
PspPI	GGNCC	6 cut(s)	214, 445, 1883, 1884, 2277, 2517
PspPPI	RGGWCCY	2 cut(s)	214, 445
PstI	CTGCAG	1 cut(s)	1774
PsuI	RGATCY	5 cut(s)	259, 895, 1361, 2265, 2584
PvuI	CGATCG	2 cut(s)	799, 1208
PvuII	CAGCTG	1 cut(s)	46
RsaI	GTAC	7 cut(s)	98, 601, 690, 1694, 1736, 2186, 2720
RsaNI	GTAC	7 cut(s)	97, 600, 689, 1693, 1735, 2185, 2719
RseI	CAYNNNNRTG	1 cut(s)	1323
SacI	GAGCTC	1 cut(s)	1806
SapI	GCTCTTC	2 cut(s)	1794, 2577
SaqAI	TTAA	5 cut(s)	306, 1833, 2328, 2417, 2637
Sau96I	GGNCC	6 cut(s)	214, 445, 1883, 1884, 2277, 2517
ScrFI	CCNGG	9 cut(s)	17, 63, 264, 265, 814, 2135, 2448, 2552, 2787
SduI	GDGCHC	8 cut(s)	946, 952, 1087, 1806, 1887, 1989, 2080, 2142
SfaNI	GCATC	6 cut(s)	91, 466, 914, 970, 1744, 2338
SfcI	CTRYAG	3 cut(s)	495, 1683, 1770
SfiI	GGCCNNNNNGGCC	1 cut(s)	320
SinI	GGWCC	3 cut(s)	214, 445, 2277
SmaI	CCCGGG	1 cut(s)	265
SmiMI	CAYNNNNRTG	1 cut(s)	1323
SmlI	CTYRAG	5 cut(s)	428, 633, 1646, 2030, 2593
SmoI	CTYRAG	5 cut(s)	428, 633, 1646, 2030, 2593
SseBI	AGGCCT	1 cut(s)	2701
SsiI	CCGC	3 cut(s)	194, 230, 2021
SspMI	CTAG	2 cut(s)	855, 1292
SstI	GAGCTC	1 cut(s)	1806
StuI	AGGCCT	1 cut(s)	2701
StyD4I	CCNGG	9 cut(s)	15, 61, 262, 263, 812, 2133, 2446, 2550, 2785
StyI	CCWWGG	2 cut(s)	2261, 2436
TaaI	ACNGT	5 cut(s)	169, 496, 1867, 1948, 2189
TaiI	ACGT	8 cut(s)	42, 706, 748, 1078, 1084, 1136, 1487, 1588
TaqI	TCGA	8 cut(s)	32, 561, 1033, 1171, 1208, 1369, 1855, 2191
TaqII	GACCGA	2 cut(s)	2109, 2523
TatI	WGTACW	1 cut(s)	2718
TauI	GCSGC	1 cut(s)	2024
TfiI	GAWTC	5 cut(s)	583, 1307, 1742, 2243, 2618
Tru1I	TTAA	5 cut(s)	306, 1833, 2328, 2417, 2637
Tru9I	TTAA	5 cut(s)	306, 1833, 2328, 2417, 2637
TscAI	CASTG	6 cut(s)	517, 721, 1327, 2307, 2393, 2664
TseFI	GTSAC	3 cut(s)	817, 1186, 2404
Tsp45I	GTSAC	3 cut(s)	817, 1186, 2404
TspGWI	ACGGA	1 cut(s)	419
TspMI	CCCGGG	1 cut(s)	263
TspRI	CASTG	6 cut(s)	517, 721, 1327, 2307, 2393, 2664
VneI	GTGCAC	1 cut(s)	2076
VpaK11BI	GGWCC	3 cut(s)	214, 445, 2277
XagI	CCTNNNNNAGG	2 cut(s)	346, 2593
XapI	RAATTY	4 cut(s)	695, 1011, 1823, 2667
XceI	RCATGY	2 cut(s)	304, 2336
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2067
XmaI	CCCGGG	1 cut(s)	263
XmnI	GAANNNNTTC	3 cut(s)	747, 2157, 2247
XspI	CTAG	2 cut(s)	855, 1292
ZraI	GACGTC	1 cut(s)	40

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.