pycom520g01190

BRCA2, oligonucleotide/oligosaccharide-binding, domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_520
OG0004075
Physical Location & Seq
Reverse (-)
902403 .. 905452
3050 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2193 bp
ATGGCGACATGGCACATGTGCTCGGACGCCGGCAACAATTACCGGTGGTACCCGGACCCCAAGCCCGAAGCCATAAACGGCGTCGTTTGTCGTCCTAGTGAGAGTGATAGGAGCAGCAGCAGCCGGCTGCCGTCCATGGGGGATGTGTTGCTGCAAGGATGTTCTAAGCTGGCGGAGGCTGAGATTCGAAATCAGGTTGTTGAGGGAGGTGGGGCTGGGATGTTCCGCAACGGATTCGGAAAGCCCGTCGCCGTCAAACAATCTTCATTAGCCAAAGCATCTTCGTTGCTTCTTGGCTCCCAAATTGCAACACCCTCAGGCCAAGTGCAAGCTACGATTATGAGTAGCAGAAGTGGATGTGGGGGCGGAGGTGCAGGTGGAGGCGGAGGCGGATGTGCAGGTGGTTTATCTAATTCCCTTTTCCACACTGGATCCGGTAAAATGGTTAATATATCCCCCGACAGTCTTGTCAGGGCGAAGACATTGCTTGGATTCCAAGACGATAATGCTCCCACCAAGATTGGGGGTTTTGGTTTTAACAGTGCTGCCCCGGTTGCAGGGACTCCTTTAATTATGAATAAGACTGTTTCACTGCAAACTAGATTTCAGAATGATCCCAACAGGTTTAATTTAACTCCGGATAAAGTTAAACCTTCATCAATCAAGTTCCATACAGCAGGAGCTAGATCTATATCTGTTTCTACTGATGCAATACAACGTGCAAGGAGTCTACTTGGTGACCCAGAGTTGGGAAATTTCTTCAATGAGGCCAATGCAGGTGACTTGGGTTTCTCATTTTCTAAAGGTAGTCCACATGATAACCGCACTCCCATTTCCCACCAGAAGAATATTAACAACTTTTTAACCAATACTTCTCCATCTCCACTGCAACCATTGTCTAATCAATTGCAGTCATCAGCTATAAGTTCGGGTACCAACCTGATTACTCAATTCAATGGTGTTAGCAATGAAACTGCTTCTAGGTCAAACAGTAAGTTAGCTTATCGGCAGAATTCCCTTAGCAAGACACAGAATACAGTAGATAACAATTGTTTGGAAAATGGTATTGGTTTGAGGACAAATCATGCTGGAATGCCACCAGCCACGCCCTTGTTTGATATTGGCACACTAGCTACAAATAATACACAGATGACTGGTGTAAAGAGGAGGCTGGGAAGAAGTTCTATTTCTCCATTCAAGACTCCTCCATCTCCACTCCAACCATTGTCTAATCAATTGCGATCGTCAGCTATAAGTTCGGGTACTAACCTCATTACCCAATTCAATGGTGTTAGCAATGAAACTGCTTCTAGGTCAAACAGTGAGTTACCTTATCGACAGAATCCCCTTAGTAAGACCCACAATACAGTAGAAAACAATTGTTTGGCAAATGGTATTGGTTTGAGGACTATTCATGCTGGAAAGCCGCCAGCCAAGCCATTGGTTGATATTTCAAATACTGTTGGCACCACTGCTATGAATACTACACAGATCACTGGTGTAAAGAGGAGGTTGGGAAGAAGTTCTATTTCTCCATTCAAGAAGCCTCGCACAAACTCCTCCACTCCATTGCATAGGAATGTTCCCCTTGTTCCTAATGGTGTGTCTACATTGTCCTCTGATCATTCATGTTCCAAAAGAAGGGTTTCTACACGATATCCTTCACCCGTGACTAGAATGTATGTGAAGAAATACTTTGGAATGCCGCGACCTGACCAGAACATGTTGGAGTGTTTATCAGATCCAGTGAGAAGAATCACTGCAACTAATGCGGAAAAGTATACATTTCTTGATGAGTCTGGCTTAAACTGCATAGGAGCAGAAGCTTTTGTCCACATGCTGGGCTGTTATGGAGCGTCAATGCAATATACCTCCAGAGAGTGGGTCACAAATCATTACAAGTGGGTAGTCTGGAAACTGGCTTGCTATGAGAGATATTATCCAGCTAAATCGTTTGGAAAATTCTTGACAGTCTCCAATGTACTCGAGGAATTGAAGTATAGATATGAAAGAGAAGTGAATCATGGTCACCGGTCTGCAATTAAGAAGATTCTGGAAGGAGATGCATCACCTTCTTCATTGGTGGTTCTATGCATTTCAGCTATTCGCTCAAATTGTGACCCAAATATGGAGACTAGCTCTGGAGCTGAAAATAGTAATGCTGCAAAACTCGAGCTTACTGATGGTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000228 GO:0000278 GO:0000280 GO:0000281 GO:0000722 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000793 GO:0000794 GO:0000795 GO:0000800 GO:0000910 GO:0001556 GO:0001701 GO:0001824 GO:0001832 GO:0001833 GO:0002020 GO:0002376 GO:0002520 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006289 GO:0006302 GO:0006310 GO:0006312 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006978 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007059 GO:0007098 GO:0007127 GO:0007140 GO:0007141 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007283 GO:0007292 GO:0007346 GO:0007399 GO:0007417 GO:0007420 GO:0007548 GO:0007568 GO:0007569 GO:0008022 GO:0008080 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008156 GO:0008219 GO:0008283 GO:0008285 GO:0008406 GO:0008585 GO:0008608 GO:0008630 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009790 GO:0009792 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0009994 GO:0010165 GO:0010212 GO:0010225 GO:0010332 GO:0010468 GO:0010484 GO:0010485 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0012501 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019953 GO:0021700 GO:0022402 GO:0022412 GO:0022414 GO:0023052 GO:0030097 GO:0030141 GO:0030154 GO:0030330 GO:0030879 GO:0031023 GO:0031297 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031410 GO:0031619 GO:0031974 GO:0031981 GO:0031982 GO:0032200 GO:0032465 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033260 GO:0033365 GO:0033554 GO:0033593 GO:0033599 GO:0033600 GO:0034212 GO:0034502 GO:0034613 GO:0034641 GO:0034645 GO:0035264 GO:0035556 GO:0036211 GO:0040007 GO:0042127 GO:0042592 GO:0042770 GO:0042771 GO:0042772 GO:0042802 GO:0043009 GO:0043015 GO:0043060 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0043967 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0044786 GO:0045005 GO:0045132 GO:0045137 GO:0045143 GO:0045184 GO:0045787 GO:0045893 GO:0045931 GO:0045934 GO:0045935 GO:0046483 GO:0046545 GO:0046660 GO:0048232 GO:0048285 GO:0048468 GO:0048469 GO:0048477 GO:0048478 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048589 GO:0048599 GO:0048608 GO:0048609 GO:0048731 GO:0048732 GO:0048856 GO:0048869 GO:0050000 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051093 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051276 GO:0051298 GO:0051301 GO:0051302 GO:0051303 GO:0051310 GO:0051311 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051716 GO:0051726 GO:0060249 GO:0060255 GO:0060322 GO:0061458 GO:0061640 GO:0061733 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070198 GO:0070199 GO:0070200 GO:0070727 GO:0071695 GO:0071704 GO:0071840 GO:0072331 GO:0072332 GO:0072594 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0097190 GO:0097193 GO:0097708 GO:0098687 GO:0098813 GO:0099086 GO:0099503 GO:0140013 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1902298 GO:1902680 GO:1902969 GO:1903046 GO:1903047 GO:1903506 GO:1903508 GO:1990426 GO:1990505 GO:2000026 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 ko05200 ko05212 ko05224 map03440 map03460 map05200 map05212 map05224
Pfam Domains
Protein Families
BRCA-2_OB1 BRCA-2_helical BRCA2

Protein Analysis

731

Amino Acids

78.45

Weight (kDa)

9.66

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCA-2_helical PF09169 606 - 675 1.4e-15 BRCA2, helical
BRCA-2_OB1 PF09103 679 - 730 8.8e-12 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 365, 389, 767
AasI GACNNNNNNGTC 1 cut(s) 467
Acc36I ACCTGC 3 cut(s) 365, 389, 767
Acc65I GGTACC 2 cut(s) 48, 932
AccB1I GGYRCC 3 cut(s) 48, 932, 1466
AccB7I CCANNNNNTGG 2 cut(s) 1840, 1881
AccI GTMKAC 3 cut(s) 730, 1607, 1781
AccII CGCG 1 cut(s) 1708
AccIII TCCGGA 1 cut(s) 637
AciI CCGC 9 cut(s) 173, 226, 366, 384, 390, 823, 1427, 1706, 1772
AclWI GGATC 4 cut(s) 426, 439, 608, 1736
AcsI RAATTY 3 cut(s) 754, 1012, 1961
AcyI GRCGYC 2 cut(s) 27, 81
AfaI GTAC 4 cut(s) 50, 934, 1264, 1983
AfiI CCNNNNNNNGG 9 cut(s) 137, 522, 557, 748, 749, 1641, 1840, 1881, 2128
AflIII ACRYGT 2 cut(s) 15, 1722
AgeI ACCGGT 2 cut(s) 42, 2031
AgsI TTSAA 7 cut(s) 763, 955, 1198, 1285, 1455, 1540, 1996
AjuI GAANNNNNNNTTGG 2 cut(s) 1050, 1082
Alw21I GWGCWC 1 cut(s) 23
Alw26I GTCTC 2 cut(s) 1978, 2126
AlwI GGATC 4 cut(s) 426, 439, 608, 1736
Ama87I CYCGRG 2 cut(s) 1985, 2171
Aor13HI TCCGGA 1 cut(s) 637
AoxI GGCC 2 cut(s) 319, 768
ApeKI GCWGC 7 cut(s) 114, 117, 120, 127, 151, 545, 2162
ApoI RAATTY 3 cut(s) 754, 1012, 1961
AsiGI ACCGGT 2 cut(s) 42, 2031
Asp700I GAANNNNTTC 3 cut(s) 1180, 1522, 1645
Asp718I GGTACC 2 cut(s) 48, 932
AspS9I GGNCC 1 cut(s) 55
AsuC2I CCSGG 2 cut(s) 53, 551
AsuHPI GGTGA 5 cut(s) 749, 791, 1656, 2021, 2061
AsuII TTCGAA 1 cut(s) 187
AvaI CYCGRG 2 cut(s) 1985, 2171
AvaII GGWCC 1 cut(s) 55
AxyI CCTNAGG 1 cut(s) 316
BamHI GGATCC 1 cut(s) 431
BanI GGYRCC 3 cut(s) 48, 932, 1466
BarI GAAGNNNNNNTAC 2 cut(s) 1633, 1665
BbsI GAAGAC 1 cut(s) 485
Bbv12I GWGCWC 1 cut(s) 23
BbvI GCAGC 7 cut(s) 114, 126, 129, 132, 138, 532, 2149
BccI CCATC 3 cut(s) 886, 1216, 2177
BceAI ACGGC 3 cut(s) 94, 115, 236
BcgI CGANNNNNNTGC 4 cut(s) 217, 251, 466, 500
BclI TGATCA 1 cut(s) 1621
BcnI CCSGG 2 cut(s) 53, 551
BcoDI GTCTC 2 cut(s) 1978, 2126
BfaI CTAG 8 cut(s) 96, 600, 684, 981, 1130, 1311, 1674, 2136
BfuAI ACCTGC 3 cut(s) 365, 389, 767
BglII AGATCT 1 cut(s) 686
BisI GCNGC 9 cut(s) 115, 118, 121, 128, 152, 546, 1427, 1706, 2163
BlsI GCNGC 9 cut(s) 116, 119, 122, 129, 153, 547, 1428, 1707, 2164
Bme1390I CCNGG 2 cut(s) 53, 551
Bme18I GGWCC 1 cut(s) 55
BmeT110I CYCGRG 2 cut(s) 1985, 2171
BmgT120I GGNCC 1 cut(s) 55
BmiI GGNNCC 6 cut(s) 50, 57, 298, 433, 934, 1468
BmrFI CCNGG 2 cut(s) 53, 551
BmsI GCATC 4 cut(s) 287, 697, 2053, 2075
BpiI GAAGAC 1 cut(s) 485
BplI GAGNNNNNCTC 2 cut(s) 2123, 2155
BpmI CTGGAG 2 cut(s) 1858, 2163
Bpu10I CCTNAGC 1 cut(s) 1019
Bpu14I TTCGAA 1 cut(s) 187
BpuMI CCSGG 2 cut(s) 53, 551
BsaBI GATNNNNATC 1 cut(s) 691
BsaHI GRCGYC 2 cut(s) 27, 81
BsaJI CCNNGG 2 cut(s) 135, 549
BsaWI WCCGGW 4 cut(s) 42, 434, 637, 2031
Bsc4I CCNNNNNNNGG 9 cut(s) 137, 522, 557, 748, 749, 1641, 1840, 1881, 2128
Bse118I RCCGGY 4 cut(s) 29, 42, 123, 2031
Bse1I ACTGG 5 cut(s) 433, 1159, 1501, 1745, 1923
Bse21I CCTNAGG 1 cut(s) 316
Bse3DI GCAATG 4 cut(s) 482, 973, 1303, 1568
Bse8I GATNNNNATC 1 cut(s) 691
BseAI TCCGGA 1 cut(s) 637
BseDI CCNNGG 2 cut(s) 135, 549
BseGI GGATG 5 cut(s) 148, 164, 225, 362, 398
BseJI GATNNNNATC 1 cut(s) 691
BseLI CCNNNNNNNGG 9 cut(s) 137, 522, 557, 748, 749, 1641, 1840, 1881, 2128
BseMI GCAATG 4 cut(s) 482, 973, 1303, 1568
BseMII CTCAG 2 cut(s) 171, 330
BseNI ACTGG 5 cut(s) 433, 1159, 1501, 1745, 1923
BseRI GAGGAG 4 cut(s) 1180, 1194, 1522, 1549
BseXI GCAGC 7 cut(s) 114, 126, 129, 132, 138, 532, 2149
BseYI CCCAGC 3 cut(s) 215, 1171, 1840
BsgI GTGCAG 2 cut(s) 393, 417
Bsh1236I CGCG 1 cut(s) 1708
Bsh1285I CGRYCG 1 cut(s) 1244
BshFI GGCC 2 cut(s) 321, 770
BshNI GGYRCC 3 cut(s) 48, 932, 1466
BshTI ACCGGT 2 cut(s) 42, 2031
BsiEI CGRYCG 1 cut(s) 1244
BsiHKAI GWGCWC 1 cut(s) 23
BsiHKCI CYCGRG 2 cut(s) 1985, 2171
BsiSI CCGG 8 cut(s) 30, 43, 53, 124, 435, 551, 638, 2032
BslFI GGGAC 1 cut(s) 574
BslI CCNNNNNNNGG 9 cut(s) 137, 522, 557, 748, 749, 1641, 1840, 1881, 2128
BsmAI GTCTC 2 cut(s) 1978, 2126
BsmFI GGGAC 1 cut(s) 574
BsmI GAATGC 2 cut(s) 1098, 1707
BsnI GGCC 2 cut(s) 321, 770
BsoBI CYCGRG 2 cut(s) 1985, 2171
Bsp119I TTCGAA 1 cut(s) 187
Bsp1286I GDGCHC 1 cut(s) 23
Bsp13I TCCGGA 1 cut(s) 637
Bsp143I GATC 7 cut(s) 431, 613, 686, 1241, 1491, 1621, 1741
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 9 cut(s) 173, 226, 366, 384, 390, 823, 1427, 1706, 1772
BspANI GGCC 2 cut(s) 321, 770
BspCNI CTCAG 2 cut(s) 172, 329
BspEI TCCGGA 1 cut(s) 637
BspFNI CGCG 1 cut(s) 1708
BspLI GGNNCC 6 cut(s) 50, 57, 298, 433, 934, 1468
BspMI ACCTGC 3 cut(s) 365, 389, 767
BspPI GGATC 4 cut(s) 426, 439, 608, 1736
BspT104I TTCGAA 1 cut(s) 187
BspT107I GGYRCC 3 cut(s) 48, 932, 1466
BsrDI GCAATG 4 cut(s) 482, 973, 1303, 1568
BsrFI RCCGGY 4 cut(s) 29, 42, 123, 2031
BsrI ACTGG 5 cut(s) 433, 1159, 1501, 1745, 1923
BssAI RCCGGY 4 cut(s) 29, 42, 123, 2031
BssECI CCNNGG 2 cut(s) 135, 549
BssMI GATC 7 cut(s) 431, 613, 686, 1241, 1491, 1621, 1741
BssNAI GTATAC 1 cut(s) 1782
BssNI GRCGYC 2 cut(s) 27, 81
BssT1I CCWWGG 1 cut(s) 135
Bst1107I GTATAC 1 cut(s) 1782
Bst4CI ACNGT 9 cut(s) 464, 542, 586, 992, 1039, 1322, 1369, 1462, 1972
BstACI GRCGYC 2 cut(s) 27, 81
BstAPI GCANNNNNTGC 1 cut(s) 1769
BstBI TTCGAA 1 cut(s) 187
BstC8I GCNNGC 6 cut(s) 31, 125, 171, 330, 1431, 1924
BstDEI CTNAG 5 cut(s) 165, 180, 316, 1019, 1349
BstDSI CCRYGG 1 cut(s) 135
BstEII GGTNACC 2 cut(s) 737, 2027
BstF5I GGATG 5 cut(s) 148, 164, 225, 362, 398
BstFNI CGCG 1 cut(s) 1708
BstKTI GATC 7 cut(s) 434, 616, 689, 1244, 1494, 1624, 1744
BstMAI GTCTC 2 cut(s) 1978, 2126
BstMBI GATC 7 cut(s) 431, 613, 686, 1241, 1491, 1621, 1741
BstMCI CGRYCG 1 cut(s) 1244
BstMWI GCNNNNNNNGC 5 cut(s) 120, 554, 1435, 1769, 1809
BstNSI RCATGY 3 cut(s) 19, 1726, 1840
BstPI GGTNACC 2 cut(s) 737, 2027
BstSCI CCNGG 2 cut(s) 51, 549
BstUI CGCG 1 cut(s) 1708
BstV1I GCAGC 7 cut(s) 114, 126, 129, 132, 138, 532, 2149
BstV2I GAAGAC 1 cut(s) 485
BstX2I RGATCY 3 cut(s) 431, 686, 1741
BstXI CCANNNNNNTGG 2 cut(s) 1286, 1441
BstYI RGATCY 3 cut(s) 431, 686, 1741
BstZ17I GTATAC 1 cut(s) 1782
Bsu36I CCTNAGG 1 cut(s) 316
BsuRI GGCC 2 cut(s) 321, 770
BtgI CCRYGG 1 cut(s) 135
BtsCI GGATG 5 cut(s) 148, 164, 225, 362, 398
BtsI GCAGTG 4 cut(s) 590, 884, 1470, 1758
BtsIMutI CAGTG 9 cut(s) 426, 547, 590, 884, 1327, 1470, 1494, 1752, 1758
BveI ACCTGC 3 cut(s) 365, 389, 767
Cac8I GCNNGC 6 cut(s) 31, 125, 171, 330, 1431, 1924
Cfr10I RCCGGY 4 cut(s) 29, 42, 123, 2031
Cfr13I GGNCC 1 cut(s) 55
CseI GACGC 3 cut(s) 35, 70, 1845
Csp6I GTAC 4 cut(s) 49, 933, 1263, 1982
CspAI ACCGGT 2 cut(s) 42, 2031
CspCI CAANNNNNGTGG 2 cut(s) 502, 537
CviQI GTAC 4 cut(s) 49, 933, 1263, 1982
DdeI CTNAG 5 cut(s) 165, 180, 316, 1019, 1349
DpnI GATC 7 cut(s) 433, 615, 688, 1243, 1493, 1623, 1743
DpnII GATC 7 cut(s) 431, 613, 686, 1241, 1491, 1621, 1741
DrdI GACNNNNNNGTC 1 cut(s) 467
DseDI GACNNNNNNGTC 1 cut(s) 467
EciI GGCGGA 4 cut(s) 188, 381, 399, 405
Eco130I CCWWGG 1 cut(s) 135
Eco32I GATATC 1 cut(s) 1658
Eco47I GGWCC 1 cut(s) 55
Eco81I CCTNAGG 1 cut(s) 316
Eco88I CYCGRG 2 cut(s) 1985, 2171
Eco91I GGTNACC 2 cut(s) 737, 2027
EcoO65I GGTNACC 2 cut(s) 737, 2027
EcoRI GAATTC 1 cut(s) 1012
EcoRV GATATC 1 cut(s) 1658
EcoT14I CCWWGG 1 cut(s) 135
EcoT22I ATGCAT 2 cut(s) 2068, 2096
ErhI CCWWGG 1 cut(s) 135
FalI AAGNNNNNCTT 2 cut(s) 1679, 1711
FaqI GGGAC 1 cut(s) 574
FbaI TGATCA 1 cut(s) 1621
FblI GTMKAC 3 cut(s) 730, 1607, 1781
Fnu4HI GCNGC 9 cut(s) 115, 118, 121, 128, 152, 546, 1427, 1706, 2163
FokI GGATG 5 cut(s) 155, 171, 232, 369, 405
Fsp4HI GCNGC 9 cut(s) 115, 118, 121, 128, 152, 546, 1427, 1706, 2163
FspBI CTAG 8 cut(s) 96, 600, 684, 981, 1130, 1311, 1674, 2136
GluI GCNGC 9 cut(s) 115, 118, 121, 128, 152, 546, 1427, 1706, 2163
GsaI CCCAGC 3 cut(s) 219, 1175, 1844
GsuI CTGGAG 2 cut(s) 1858, 2163
HaeIII GGCC 2 cut(s) 321, 770
HapII CCGG 8 cut(s) 30, 43, 53, 124, 435, 551, 638, 2032
HgaI GACGC 3 cut(s) 35, 70, 1845
Hin1I GRCGYC 2 cut(s) 27, 81
HindIII AAGCTT 1 cut(s) 1824
HpaII CCGG 8 cut(s) 30, 43, 53, 124, 435, 551, 638, 2032
HphI GGTGA 5 cut(s) 749, 791, 1656, 2021, 2061
Hpy166II GTNNAC 5 cut(s) 731, 812, 1608, 1782, 1834
Hpy188I TCNGA 5 cut(s) 25, 239, 609, 1621, 1741
Hpy188III TCNNGA 9 cut(s) 638, 1198, 1540, 1790, 1875, 1912, 1966, 2054, 2142
Hpy8I GTNNAC 5 cut(s) 731, 812, 1608, 1782, 1834
Hpy99I CGWCG 2 cut(s) 86, 251
HpyAV CCTTC 5 cut(s) 663, 1635, 1671, 2051, 2082
HpyCH4III ACNGT 9 cut(s) 464, 542, 586, 992, 1039, 1322, 1369, 1462, 1972
HpyCH4IV ACGT 1 cut(s) 718
HpyF10VI GCNNNNNNNGC 5 cut(s) 120, 554, 1435, 1769, 1809
HpyF3I CTNAG 5 cut(s) 165, 180, 316, 1019, 1349
HpySE526I ACGT 1 cut(s) 718
Hsp92I GRCGYC 2 cut(s) 27, 81
Kpn2I TCCGGA 1 cut(s) 637
KpnI GGTACC 2 cut(s) 52, 936
KroI GCCGGC 2 cut(s) 29, 123
KroNI GCCGGC 2 cut(s) 31, 125
Ksp22I TGATCA 1 cut(s) 1621
Kzo9I GATC 7 cut(s) 431, 613, 686, 1241, 1491, 1621, 1741
LmnI GCTCC 7 cut(s) 111, 302, 514, 680, 1817, 1853, 2144
Lsp1109I GCAGC 7 cut(s) 114, 126, 129, 132, 138, 532, 2149
LweI GCATC 4 cut(s) 287, 697, 2053, 2075
MaeI CTAG 8 cut(s) 96, 600, 684, 981, 1130, 1311, 1674, 2136
MaeII ACGT 1 cut(s) 718
MaeIII GTNAC 7 cut(s) 737, 779, 1326, 1669, 1885, 2027, 2117
MalI GATC 7 cut(s) 433, 615, 688, 1243, 1493, 1623, 1743
MboI GATC 7 cut(s) 431, 613, 686, 1241, 1491, 1621, 1741
MfeI CAATTG 4 cut(s) 905, 1048, 1235, 1378
MflI RGATCY 3 cut(s) 431, 686, 1741
MhlI GDGCHC 1 cut(s) 23
MlyI GAGTC 4 cut(s) 556, 736, 1195, 1805
MmeI TCCRAC 2 cut(s) 1243, 1707
Mph1103I ATGCAT 2 cut(s) 2068, 2096
MroI TCCGGA 1 cut(s) 637
MroNI GCCGGC 2 cut(s) 29, 123
MroXI GAANNNNTTC 3 cut(s) 1180, 1522, 1645
MslI CAYNNNNRTG 2 cut(s) 1475, 1578
MspI CCGG 8 cut(s) 30, 43, 53, 124, 435, 551, 638, 2032
MspR9I CCNGG 2 cut(s) 53, 551
MunI CAATTG 4 cut(s) 905, 1048, 1235, 1378
Mva1269I GAATGC 2 cut(s) 1098, 1707
MvnI CGCG 1 cut(s) 1708
MwoI GCNNNNNNNGC 5 cut(s) 120, 554, 1435, 1769, 1809
NaeI GCCGGC 2 cut(s) 31, 125
NciI CCSGG 2 cut(s) 53, 551
NcoI CCATGG 1 cut(s) 135
NdeII GATC 7 cut(s) 431, 613, 686, 1241, 1491, 1621, 1741
NgoMIV GCCGGC 2 cut(s) 29, 123
NlaIV GGNNCC 6 cut(s) 50, 57, 298, 433, 934, 1468
NmuCI GTSAC 6 cut(s) 737, 779, 1669, 1885, 2027, 2117
NsiI ATGCAT 2 cut(s) 2068, 2096
NspI RCATGY 3 cut(s) 19, 1726, 1840
NspV TTCGAA 1 cut(s) 187
PaeR7I CTCGAG 2 cut(s) 1985, 2171
PaqCI CACCTGC 3 cut(s) 365, 389, 767
PciI ACATGT 2 cut(s) 15, 1722
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PctI GAATGC 2 cut(s) 1098, 1707
PdiI GCCGGC 2 cut(s) 31, 125
PdmI GAANNNNTTC 3 cut(s) 1180, 1522, 1645
PfeI GAWTC 7 cut(s) 184, 234, 492, 1342, 1755, 2020, 2050
PflMI CCANNNNNTGG 2 cut(s) 1840, 1881
PinAI ACCGGT 2 cut(s) 42, 2031
PkrI GCNGC 9 cut(s) 116, 119, 122, 129, 153, 547, 1428, 1707, 2164
Ple19I CGATCG 1 cut(s) 1244
PleI GAGTC 4 cut(s) 556, 735, 1195, 1804
PpsI GAGTC 4 cut(s) 556, 735, 1195, 1804
PscI ACATGT 2 cut(s) 15, 1722
PspEI GGTNACC 2 cut(s) 737, 2027
PspFI CCCAGC 3 cut(s) 215, 1171, 1840
PspN4I GGNNCC 6 cut(s) 50, 57, 298, 433, 934, 1468
PspPI GGNCC 1 cut(s) 55
PspXI VCTCGAGB 2 cut(s) 1985, 2171
PsuI RGATCY 3 cut(s) 431, 686, 1741
PvuI CGATCG 1 cut(s) 1244
RsaI GTAC 4 cut(s) 50, 934, 1264, 1983
RsaNI GTAC 4 cut(s) 49, 933, 1263, 1982
RseI CAYNNNNRTG 2 cut(s) 1475, 1578
SatI GCNGC 9 cut(s) 115, 118, 121, 128, 152, 546, 1427, 1706, 2163
Sau3AI GATC 7 cut(s) 431, 613, 686, 1241, 1491, 1621, 1741
Sau96I GGNCC 1 cut(s) 55
SchI GAGTC 4 cut(s) 556, 736, 1195, 1805
ScrFI CCNGG 2 cut(s) 53, 551
SduI GDGCHC 1 cut(s) 23
SfaNI GCATC 4 cut(s) 287, 697, 2053, 2075
Sfr274I CTCGAG 2 cut(s) 1985, 2171
SfuI TTCGAA 1 cut(s) 187
SinI GGWCC 1 cut(s) 55
SlaI CTCGAG 2 cut(s) 1985, 2171
SmiMI CAYNNNNRTG 2 cut(s) 1475, 1578
SmlI CTYRAG 2 cut(s) 1985, 2171
SmoI CTYRAG 2 cut(s) 1985, 2171
SsiI CCGC 9 cut(s) 173, 226, 366, 384, 390, 823, 1427, 1706, 1772
SspI AATATT 1 cut(s) 850
SspMI CTAG 8 cut(s) 96, 600, 684, 981, 1130, 1311, 1674, 2136
StyD4I CCNGG 2 cut(s) 51, 549
StyI CCWWGG 1 cut(s) 135
TaaI ACNGT 9 cut(s) 464, 542, 586, 992, 1039, 1322, 1369, 1462, 1972
TaiI ACGT 1 cut(s) 721
TaqI TCGA 4 cut(s) 187, 1336, 1986, 2172
TatI WGTACW 1 cut(s) 1981
TauI GCSGC 2 cut(s) 1429, 1708
TfiI GAWTC 7 cut(s) 184, 234, 492, 1342, 1755, 2020, 2050
TscAI CASTG 9 cut(s) 433, 547, 597, 891, 1327, 1477, 1501, 1752, 1765
TseFI GTSAC 6 cut(s) 737, 779, 1669, 1885, 2027, 2117
TseI GCWGC 7 cut(s) 114, 117, 120, 127, 151, 545, 2162
Tsp45I GTSAC 6 cut(s) 737, 779, 1669, 1885, 2027, 2117
TspGWI ACGGA 1 cut(s) 246
TspRI CASTG 9 cut(s) 433, 547, 597, 891, 1327, 1477, 1501, 1752, 1765
Van91I CCANNNNNTGG 2 cut(s) 1840, 1881
VpaK11BI GGWCC 1 cut(s) 55
XapI RAATTY 3 cut(s) 754, 1012, 1961
XceI RCATGY 3 cut(s) 19, 1726, 1840
XhoI CTCGAG 2 cut(s) 1985, 2171
XmiI GTMKAC 3 cut(s) 730, 1607, 1781
XmnI GAANNNNTTC 3 cut(s) 1180, 1522, 1645
XspI CTAG 8 cut(s) 96, 600, 684, 981, 1130, 1311, 1674, 2136
Zsp2I ATGCAT 2 cut(s) 2068, 2096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.