Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17616 |
| fragaria_vesca | FvH4_5g20640 FvH4_5g20640 FvH4_5g20640 |
| malus_domestica | MD14G1082200.v1.1 MD14G1090100.v1.1 |
| prunus_persica | Prupe.2G056400_v2.0.a1 Prupe.7G036400_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0206021 RchiOBHm_Chr7g0206121 RchiOBHm_Chr7g0206131 |
| rosa_laevigata | RLG00000003334 RLG00000003337 |
| rosa_multiflora | Rmu_sc0000076.1_g000009 Rmu_sc0000076.1_g000017 Rmu_sc0004084.1_g000022 |
| rosa_roxburghii | Rroxscaffold_3G00251830 |
| rosa_rugosa | Rorug07G0094500 Rorug07G0094500 |
| rosa_samantha | Rh7AG226700 Rh7BG222900 Rh7CG240700 Rh7DG232700 |
| rosa_wichuraiana | Rw0G012920 Rw7G019570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 171 |
| AclWI | GGATC | 1 cut(s) | 156 |
| AcsI | RAATTY | 2 cut(s) | 15, 130 |
| AcuI | CTGAAG | 1 cut(s) | 297 |
| AfaI | GTAC | 2 cut(s) | 161, 260 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 28 |
| AgsI | TTSAA | 3 cut(s) | 13, 307, 350 |
| AluBI | AGCT | 1 cut(s) | 280 |
| AluI | AGCT | 1 cut(s) | 280 |
| Alw21I | GWGCWC | 1 cut(s) | 234 |
| AlwI | GGATC | 1 cut(s) | 156 |
| ApoI | RAATTY | 2 cut(s) | 15, 130 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 354 |
| AsuHPI | GGTGA | 1 cut(s) | 11 |
| Bbv12I | GWGCWC | 1 cut(s) | 234 |
| BfaI | CTAG | 1 cut(s) | 68 |
| BfuAI | ACCTGC | 1 cut(s) | 171 |
| BsaJI | CCNNGG | 1 cut(s) | 181 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseDI | CCNNGG | 1 cut(s) | 181 |
| BseGI | GGATG | 1 cut(s) | 261 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseMII | CTCAG | 2 cut(s) | 18, 347 |
| BsiHKAI | GWGCWC | 1 cut(s) | 234 |
| BslFI | GGGAC | 1 cut(s) | 116 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BsmFI | GGGAC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 234 |
| Bsp1407I | TGTACA | 1 cut(s) | 258 |
| Bsp143I | GATC | 1 cut(s) | 148 |
| BspCNI | CTCAG | 2 cut(s) | 19, 346 |
| BspMI | ACCTGC | 1 cut(s) | 171 |
| BspPI | GGATC | 1 cut(s) | 156 |
| BsrGI | TGTACA | 1 cut(s) | 258 |
| BssECI | CCNNGG | 1 cut(s) | 181 |
| BssMI | GATC | 1 cut(s) | 148 |
| Bst4CI | ACNGT | 1 cut(s) | 236 |
| Bst6I | CTCTTC | 1 cut(s) | 104 |
| BstAUI | TGTACA | 1 cut(s) | 258 |
| BstDEI | CTNAG | 2 cut(s) | 27, 333 |
| BstDSI | CCRYGG | 1 cut(s) | 181 |
| BstF5I | GGATG | 1 cut(s) | 261 |
| BstKTI | GATC | 1 cut(s) | 151 |
| BstMBI | GATC | 1 cut(s) | 148 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 317 |
| BstX2I | RGATCY | 1 cut(s) | 148 |
| BstYI | RGATCY | 1 cut(s) | 148 |
| BtgI | CCRYGG | 1 cut(s) | 181 |
| BtsCI | GGATG | 1 cut(s) | 261 |
| BveI | ACCTGC | 1 cut(s) | 171 |
| Csp6I | GTAC | 2 cut(s) | 160, 259 |
| CviAII | CATG | 2 cut(s) | 106, 205 |
| CviJI | RGCY | 2 cut(s) | 280, 311 |
| CviKI_1 | RGCY | 2 cut(s) | 280, 311 |
| CviQI | GTAC | 2 cut(s) | 160, 259 |
| DdeI | CTNAG | 2 cut(s) | 27, 333 |
| DpnI | GATC | 1 cut(s) | 150 |
| DpnII | GATC | 1 cut(s) | 148 |
| DraI | TTTAAA | 1 cut(s) | 276 |
| Eam1104I | CTCTTC | 1 cut(s) | 104 |
| EarI | CTCTTC | 1 cut(s) | 104 |
| Eco57I | CTGAAG | 1 cut(s) | 297 |
| FaeI | CATG | 2 cut(s) | 109, 208 |
| FaqI | GGGAC | 1 cut(s) | 116 |
| FatI | CATG | 2 cut(s) | 105, 204 |
| FokI | GGATG | 1 cut(s) | 268 |
| FspBI | CTAG | 1 cut(s) | 68 |
| Hin1II | CATG | 2 cut(s) | 109, 208 |
| HindIII | AAGCTT | 1 cut(s) | 278 |
| HinfI | GANTC | 2 cut(s) | 201, 289 |
| HphI | GGTGA | 1 cut(s) | 11 |
| Hpy188I | TCNGA | 2 cut(s) | 316, 336 |
| HpyAV | CCTTC | 2 cut(s) | 220, 301 |
| HpyCH4III | ACNGT | 1 cut(s) | 236 |
| HpyCH4IV | ACGT | 1 cut(s) | 326 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 317 |
| HpyF3I | CTNAG | 2 cut(s) | 27, 333 |
| HpySE526I | ACGT | 1 cut(s) | 326 |
| Hsp92II | CATG | 2 cut(s) | 109, 208 |
| Kzo9I | GATC | 1 cut(s) | 148 |
| LmnI | GCTCC | 1 cut(s) | 229 |
| LpnPI | CCDG | 4 cut(s) | 55, 130, 176, 344 |
| MaeI | CTAG | 1 cut(s) | 68 |
| MaeII | ACGT | 1 cut(s) | 326 |
| MaeIII | GTNAC | 1 cut(s) | 188 |
| MalI | GATC | 1 cut(s) | 150 |
| MboI | GATC | 1 cut(s) | 148 |
| MboII | GAAGA | 2 cut(s) | 54, 121 |
| MflI | RGATCY | 1 cut(s) | 148 |
| MhlI | GDGCHC | 1 cut(s) | 234 |
| MluCI | AATT | 2 cut(s) | 15, 130 |
| MlyI | GAGTC | 1 cut(s) | 210 |
| MnlI | CCTC | 4 cut(s) | 22, 105, 202, 330 |
| MroXI | GAANNNNTTC | 1 cut(s) | 354 |
| MseI | TTAA | 2 cut(s) | 216, 275 |
| MslI | CAYNNNNRTG | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 317 |
| NdeII | GATC | 1 cut(s) | 148 |
| NlaIII | CATG | 2 cut(s) | 109, 208 |
| PdmI | GAANNNNTTC | 1 cut(s) | 354 |
| PfeI | GAWTC | 1 cut(s) | 289 |
| PleI | GAGTC | 1 cut(s) | 209 |
| PpsI | GAGTC | 1 cut(s) | 209 |
| PsuI | RGATCY | 1 cut(s) | 148 |
| RsaI | GTAC | 2 cut(s) | 161, 260 |
| RsaNI | GTAC | 2 cut(s) | 160, 259 |
| RseI | CAYNNNNRTG | 1 cut(s) | 94 |
| SaqAI | TTAA | 2 cut(s) | 216, 275 |
| Sau3AI | GATC | 1 cut(s) | 148 |
| SchI | GAGTC | 1 cut(s) | 210 |
| SduI | GDGCHC | 1 cut(s) | 234 |
| SetI | ASST | 5 cut(s) | 44, 165, 213, 282, 329 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 94 |
| Sse9I | AATT | 2 cut(s) | 15, 130 |
| SspMI | CTAG | 1 cut(s) | 68 |
| TaaI | ACNGT | 1 cut(s) | 236 |
| TaiI | ACGT | 1 cut(s) | 329 |
| TasI | AATT | 2 cut(s) | 15, 130 |
| TatI | WGTACW | 1 cut(s) | 258 |
| TfiI | GAWTC | 1 cut(s) | 289 |
| Tru1I | TTAA | 2 cut(s) | 216, 275 |
| Tru9I | TTAA | 2 cut(s) | 216, 275 |
| TspDTI | ATGAA | 3 cut(s) | 122, 239, 272 |
| TspGWI | ACGGA | 2 cut(s) | 68, 170 |
| XapI | RAATTY | 2 cut(s) | 15, 130 |
| XmnI | GAANNNNTTC | 1 cut(s) | 354 |
| XspI | CTAG | 1 cut(s) | 68 |