Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0007437

Physical Location & Seq

Genomic Coordinates Reverse (-)

7419454 .. 7425726

Gene Structure 6273 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0094500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGATCGGAGGAGACCTGCGAGTCCAGTGTACTCGCGCCAGTGGAGCGGAGGTTCCAGCAGCCCAGGCTCATCTCCGGCGATGTCGCCGGCGCACCCTCAGTCGCGGCTCAATCCTTCCGCGACTGGATTTTCCACCGTCAAGCGGAACCAGAACTTCGCCGCCAAAGCCGCCGCGCAGCGGCTTGCGCAGGTCATGGCGTCGCAGACGACGGTTGACGACGACGACGACGACGACGATGATCTCGGGTTCCGATTCCCTGGCCAGCCGCCTCATGCGCCGTCTTCTTACTCCAGCAATGGCGCCAATAACGGCGGGAGTGGTCTTCCGGCGATTTCCACGACTCGGCCTACTAGATCTCCGTCTCCGGCGTTTCCTCGGAACTTTGTAGAGCATACTACTTCAGTTCGTTCGGCATCAACAGGAAGATCTGCAGTGTCGCTTCGTGCAGGGACTGTAGTGCCAGCCAGCAAGACCTCTATTAGGACTCCAGCATCCATACCTCCAGTTGATCCTCCTTCAAATAGAAACAGAGATAAAAGGTTTACGCGGGACATTGGACAGCTTAACTCACAAGCCCCAGGAGATGAACGTGAAGTTGCTGCTCTACGTGATGAACTTGATATGGTACAAGAAGAAAACGAGAATATTCTTGACAAGCTCCGAAGCGCTGAAGAAAGGTGGGAACAAGCAGAAGCCAGAGCTAAGGAGCTTGAGAAACAGGTTGCAACACTAGGAGAAGGTGTATCCCTGGAAGCCAGATTATTGAGCAGGAAGGAAGAAAATTTGCGTCAAAGACAGGCTGCTCTAGACGCTGCAAGACAAAACGAGGATGGGAAAGATAAGGAAATTGCCACTCTTCATTCAGAAGTTGAGAACCTAAAAGACAGTGCTGAAGCAGCAGCGGAAAAGCTCCGAGAAGCAGAATCTGAAGCAAACACTCTTCGCTCAAAGACGCAAAGAATGATTTTAACTCAAGAAGAGATGGAGGAAGTTGTTCTCAAGAGATGTTGGCTTTCTCGCTACTGGGGTTTAGCTGTGCAGCATGGCATATGTGCTGATATAGCAGAATCAAAGCATGAGCATTGGTCGTCTTTAGCTCCTCTTCCATATGAAGTCATAATTTCTGCTGGACAAAAGGCAAAGGAGGATTCTTGGGAAAAAAGTGGTGATGATCCAGATAGAAGTAATTTAGGTCGTGATTTGAGTGACCTCACTGGGGAAGGAAATATTGAGAGTATGCTTTCTGTGGAAATGGGATTGAGGGAACTAGCCTCTCTAAAGGTTGAGGATGCTGTCGCACTTGCATTGGCCCGACATAGACGTCCAGATTCTATTCGGCAGTCAGCTTTTGATTCAAAATCATCCGGTGATCCCAAGTTTATGGAGGCATTTGAACTTAGTGAAGAGGAGATTAATGATATTCGTTTCAAAGAGGCTTGGCTGACTTACTTTTGGAGAAGAGCTAGAGTACATGGTGTCGAAGACGATATAGCAGATGATAGGCTTCAGTTTTGGATAAGCCGCATAAGCCGTAGCAGCGCACAGTCGCCAACTTCACATGATGCTGTGGATGTGGAGGGCGGTTTATTGGAGCTGAGGAAGCTGGGAATTGAAAAGCAACTCTGGGAAGCATCACGCAAGGAAATCGATCATCCCAACTCAGATATTACTTATAATCACAATCACAAATCTTCTGCAGATTTCGACACCTCTTCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

574

Amino Acids

63.63

Weight (kDa)

5.32

Isoelectric Point (pI)

61.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007437)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17616
fragaria_vesca	FvH4_5g20640 FvH4_5g20640 FvH4_5g20640
malus_domestica	MD14G1082200.v1.1 MD14G1090100.v1.1
prunus_persica	Prupe.2G056400_v2.0.a1 Prupe.7G036400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0206021 RchiOBHm_Chr7g0206121 RchiOBHm_Chr7g0206131
rosa_laevigata	RLG00000003334 RLG00000003337
rosa_multiflora	Rmu_sc0000076.1_g000009 Rmu_sc0000076.1_g000017 Rmu_sc0004084.1_g000022
rosa_roxburghii	Rroxscaffold_3G00251830
rosa_rugosa	Rorug07G0094500 Rorug07G0094500
rosa_samantha	Rh7AG226700 Rh7BG222900 Rh7CG240700 Rh7DG232700
rosa_wichuraiana	Rw0G012920 Rw7G019570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1677
AasI	GACNNNNNNGTC	2 cut(s)	21, 1323
AatII	GACGTC	1 cut(s)	1327
Acc16I	TGCGCA	1 cut(s)	189
Acc36I	ACCTGC	2 cut(s)	25, 181
AccB1I	GGYRCC	1 cut(s)	302
AccBSI	CCGCTC	1 cut(s)	48
AccII	CGCG	5 cut(s)	37, 106, 122, 176, 550
AclWI	GGATC	4 cut(s)	12, 506, 1169, 1367
AcoI	YGGCCR	1 cut(s)	262
AcsI	RAATTY	1 cut(s)	784
AcuI	CTGAAG	5 cut(s)	387, 693, 915, 951, 1493
AcyI	GRCGYC	3 cut(s)	200, 303, 1324
AfaI	GTAC	3 cut(s)	32, 630, 1473
AfeI	AGCGCT	1 cut(s)	670
AfiI	CCNNNNNNNGG	5 cut(s)	144, 180, 345, 483, 1219
AgsI	TTSAA	5 cut(s)	522, 1359, 1397, 1432, 1616
AjnI	CCWGG	4 cut(s)	64, 259, 580, 750
AloI	GAACNNNNNNTCC	2 cut(s)	37, 69
Alw26I	GTCTC	2 cut(s)	7, 369
AlwI	GGATC	4 cut(s)	12, 506, 1169, 1367
AlwNI	CAGNNNCTG	2 cut(s)	455, 929
Ama87I	CYCGRG	1 cut(s)	245
Aor51HI	AGCGCT	1 cut(s)	670
AoxI	GGCC	3 cut(s)	262, 347, 1311
ApeKI	GCWGC	9 cut(s)	60, 178, 602, 803, 815, 899, 902, 1042, 1539
ApoI	RAATTY	1 cut(s)	784
AseI	ATTAAT	1 cut(s)	1416
Asp700I	GAANNNNTTC	1 cut(s)	996
AspLEI	GCGC	8 cut(s)	39, 94, 178, 190, 280, 305, 671, 1544
AspS9I	GGNCC	1 cut(s)	1312
AsuHPI	GGTGA	2 cut(s)	1181, 1382
AvaI	CYCGRG	1 cut(s)	245
BalI	TGGCCA	1 cut(s)	264
BanI	GGYRCC	1 cut(s)	302
BbsI	GAAGAC	3 cut(s)	276, 317, 1491
BbvCI	CCTCAGC	1 cut(s)	1598
BbvI	GCAGC	9 cut(s)	72, 190, 589, 790, 802, 911, 914, 1054, 1551
BccI	CCATC	2 cut(s)	827, 979
BceAI	ACGGC	3 cut(s)	265, 328, 1518
BcgI	CGANNNNNNTGC	2 cut(s)	1630, 1664
BciT130I	CCWGG	4 cut(s)	66, 261, 582, 752
BciVI	GTATCC	1 cut(s)	757
BcoDI	GTCTC	2 cut(s)	7, 369
BfaI	CTAG	5 cut(s)	354, 734, 809, 1271, 1467
BfmI	CTRYAG	3 cut(s)	432, 456, 1698
BfoI	RGCGCY	2 cut(s)	306, 672
BfuAI	ACCTGC	2 cut(s)	25, 181
BfuI	GTATCC	1 cut(s)	757
BglII	AGATCT	2 cut(s)	356, 428
Bme1390I	CCNGG	4 cut(s)	66, 261, 582, 752
BmeT110I	CYCGRG	1 cut(s)	245
BmgT120I	GGNCC	1 cut(s)	1312
BmiI	GGNNCC	4 cut(s)	55, 149, 251, 304
BmrFI	CCNGG	4 cut(s)	66, 261, 582, 752
BmrI	ACTGGG	2 cut(s)	1036, 1227
BmsI	GCATC	5 cut(s)	425, 503, 1282, 1555, 1643
BmuI	ACTGGG	2 cut(s)	1036, 1227
BpiI	GAAGAC	3 cut(s)	276, 317, 1491
BpmI	CTGGAG	3 cut(s)	277, 474, 489
Bpu10I	CCTNAGC	2 cut(s)	705, 1598
BpuEI	CTTGAG	3 cut(s)	734, 960, 986
Bsa29I	ATCGAT	1 cut(s)	1650
BsaAI	YACGTR	1 cut(s)	611
BsaHI	GRCGYC	3 cut(s)	200, 303, 1324
BsaI	GGTCTC	1 cut(s)	7
BsaJI	CCNNGG	5 cut(s)	64, 259, 377, 580, 750
BsaWI	WCCGGW	1 cut(s)	1367
BsaXI	ACNNNNNCTCC	6 cut(s)	37, 67, 343, 373, 729, 759
Bsc4I	CCNNNNNNNGG	5 cut(s)	144, 180, 345, 483, 1219
Bse118I	RCCGGY	1 cut(s)	88
Bse1I	ACTGG	6 cut(s)	26, 40, 130, 506, 1031, 1222
Bse3DI	GCAATG	1 cut(s)	304
BseBI	CCWGG	4 cut(s)	66, 261, 582, 752
BseCI	ATCGAT	1 cut(s)	1650
BseDI	CCNNGG	5 cut(s)	64, 259, 377, 580, 750
BseGI	GGATG	6 cut(s)	494, 838, 1297, 1364, 1579, 1654
BseLI	CCNNNNNNNGG	5 cut(s)	144, 180, 345, 483, 1219
BseMI	GCAATG	1 cut(s)	304
BseMII	CTCAG	3 cut(s)	113, 1589, 1677
BseNI	ACTGG	6 cut(s)	26, 40, 130, 506, 1031, 1222
BseRI	GAGGAG	3 cut(s)	25, 1092, 1424
BseXI	GCAGC	9 cut(s)	72, 190, 589, 790, 802, 911, 914, 1054, 1551
BseYI	CCCAGC	1 cut(s)	1606
BsgI	GTGCAG	2 cut(s)	468, 1061
Bsh1236I	CGCG	5 cut(s)	37, 106, 122, 176, 550
BshFI	GGCC	3 cut(s)	264, 349, 1313
BshNI	GGYRCC	1 cut(s)	302
BshVI	ATCGAT	1 cut(s)	1650
BsiHKCI	CYCGRG	1 cut(s)	245
BsiSI	CCGG	5 cut(s)	77, 89, 329, 368, 1368
BslFI	GGGAC	2 cut(s)	466, 566
BslI	CCNNNNNNNGG	5 cut(s)	144, 180, 345, 483, 1219
BsmAI	GTCTC	2 cut(s)	7, 369
BsmBI	CGTCTC	1 cut(s)	369
BsmFI	GGGAC	2 cut(s)	466, 566
BsnI	GGCC	3 cut(s)	264, 349, 1313
Bso31I	GGTCTC	1 cut(s)	7
BsoBI	CYCGRG	1 cut(s)	245
Bsp143I	GATC	8 cut(s)	4, 241, 356, 428, 511, 1174, 1372, 1651
BspANI	GGCC	3 cut(s)	264, 349, 1313
BspCNI	CTCAG	3 cut(s)	112, 1590, 1676
BspDI	ATCGAT	1 cut(s)	1650
BspFNI	CGCG	5 cut(s)	37, 106, 122, 176, 550
BspLI	GGNNCC	4 cut(s)	55, 149, 251, 304
BspMAI	CTGCAG	2 cut(s)	436, 1702
BspMI	ACCTGC	2 cut(s)	25, 181
BspPI	GGATC	4 cut(s)	12, 506, 1169, 1367
BspQI	GCTCTTC	1 cut(s)	1456
BspT107I	GGYRCC	1 cut(s)	302
BspTNI	GGTCTC	1 cut(s)	7
BsrBI	CCGCTC	1 cut(s)	48
BsrDI	GCAATG	1 cut(s)	304
BsrFI	RCCGGY	1 cut(s)	88
BsrI	ACTGG	6 cut(s)	26, 40, 130, 506, 1031, 1222
BssAI	RCCGGY	1 cut(s)	88
BssECI	CCNNGG	5 cut(s)	64, 259, 377, 580, 750
BssMI	GATC	8 cut(s)	4, 241, 356, 428, 511, 1174, 1372, 1651
BssNI	GRCGYC	3 cut(s)	200, 303, 1324
Bst2UI	CCWGG	4 cut(s)	66, 261, 582, 752
Bst4CI	ACNGT	5 cut(s)	139, 214, 457, 890, 1548
Bst6I	CTCTTC	7 cut(s)	864, 948, 975, 1110, 1401, 1456, 1720
BstACI	GRCGYC	3 cut(s)	200, 303, 1324
BstBAI	YACGTR	1 cut(s)	611
BstC8I	GCNNGC	5 cut(s)	90, 186, 266, 465, 469
BstDEI	CTNAG	5 cut(s)	99, 705, 1400, 1598, 1663
BstENI	CCTNNNNNAGG	1 cut(s)	481
BstF5I	GGATG	6 cut(s)	494, 838, 1297, 1364, 1579, 1654
BstFNI	CGCG	5 cut(s)	37, 106, 122, 176, 550
BstH2I	RGCGCY	2 cut(s)	306, 672
BstHHI	GCGC	8 cut(s)	39, 94, 178, 190, 280, 305, 671, 1544
BstKTI	GATC	8 cut(s)	7, 244, 359, 431, 514, 1177, 1375, 1654
BstMAI	GTCTC	2 cut(s)	7, 369
BstMBI	GATC	8 cut(s)	4, 241, 356, 428, 511, 1174, 1372, 1651
BstNI	CCWGG	4 cut(s)	66, 261, 582, 752
BstSCI	CCNGG	4 cut(s)	64, 259, 580, 750
BstSFI	CTRYAG	3 cut(s)	432, 456, 1698
BstUI	CGCG	5 cut(s)	37, 106, 122, 176, 550
BstV1I	GCAGC	9 cut(s)	72, 190, 589, 790, 802, 911, 914, 1054, 1551
BstV2I	GAAGAC	3 cut(s)	276, 317, 1491
BstX2I	RGATCY	2 cut(s)	356, 428
BstXI	CCANNNNNNTGG	1 cut(s)	1384
BstYI	RGATCY	2 cut(s)	356, 428
Bsu15I	ATCGAT	1 cut(s)	1650
BsuI	GTATCC	1 cut(s)	757
BsuRI	GGCC	3 cut(s)	264, 349, 1313
BsuTUI	ATCGAT	1 cut(s)	1650
BtgZI	GCGATG	1 cut(s)	95
BtsCI	GGATG	6 cut(s)	494, 838, 1297, 1364, 1579, 1654
BtsI	GCAGTG	1 cut(s)	441
BtsIMutI	CAGTG	5 cut(s)	33, 47, 441, 895, 1215
BveI	ACCTGC	2 cut(s)	25, 181
Cac8I	GCNNGC	5 cut(s)	90, 186, 266, 465, 469
CaiI	CAGNNNCTG	2 cut(s)	455, 929
CfoI	GCGC	8 cut(s)	39, 94, 178, 190, 280, 305, 671, 1544
Cfr10I	RCCGGY	1 cut(s)	88
Cfr13I	GGNCC	1 cut(s)	1312
ClaI	ATCGAT	1 cut(s)	1650
CseI	GACGC	4 cut(s)	189, 779, 821, 964
Csp6I	GTAC	3 cut(s)	31, 629, 1472
CviAII	CATG	6 cut(s)	196, 275, 1046, 1079, 1475, 1562
CviQI	GTAC	3 cut(s)	31, 629, 1472
DdeI	CTNAG	5 cut(s)	99, 705, 1400, 1598, 1663
DinI	GGCGCC	1 cut(s)	304
DpnI	GATC	8 cut(s)	6, 243, 358, 430, 513, 1176, 1374, 1653
DpnII	GATC	8 cut(s)	4, 241, 356, 428, 511, 1174, 1372, 1651
DrdI	GACNNNNNNGTC	2 cut(s)	21, 1323
DseDI	GACNNNNNNGTC	2 cut(s)	21, 1323
EaeI	YGGCCR	1 cut(s)	262
Eam1104I	CTCTTC	7 cut(s)	864, 948, 975, 1110, 1401, 1456, 1720
EarI	CTCTTC	7 cut(s)	864, 948, 975, 1110, 1401, 1456, 1720
Eco31I	GGTCTC	1 cut(s)	7
Eco47III	AGCGCT	1 cut(s)	670
Eco57I	CTGAAG	5 cut(s)	387, 693, 915, 951, 1493
Eco88I	CYCGRG	1 cut(s)	245
EcoNI	CCTNNNNNAGG	1 cut(s)	481
EcoRII	CCWGG	4 cut(s)	64, 259, 580, 750
EgeI	GGCGCC	1 cut(s)	304
EheI	GGCGCC	1 cut(s)	304
Esp3I	CGTCTC	1 cut(s)	369
FaeI	CATG	6 cut(s)	199, 278, 1049, 1082, 1478, 1565
FaqI	GGGAC	2 cut(s)	466, 566
FatI	CATG	6 cut(s)	195, 274, 1045, 1078, 1474, 1561
FauI	CCCGC	2 cut(s)	308, 543
FauNDI	CATATG	2 cut(s)	1052, 1111
FokI	GGATG	6 cut(s)	481, 845, 1304, 1351, 1586, 1641
FspBI	CTAG	5 cut(s)	354, 734, 809, 1271, 1467
FspI	TGCGCA	1 cut(s)	189
GlaI	GCGC	8 cut(s)	38, 93, 177, 189, 279, 304, 670, 1543
GsaI	CCCAGC	1 cut(s)	1610
GsuI	CTGGAG	3 cut(s)	277, 474, 489
HaeII	RGCGCY	2 cut(s)	306, 672
HaeIII	GGCC	3 cut(s)	264, 349, 1313
HapII	CCGG	5 cut(s)	77, 89, 329, 368, 1368
HgaI	GACGC	4 cut(s)	189, 779, 821, 964
HhaI	GCGC	8 cut(s)	39, 94, 178, 190, 280, 305, 671, 1544
Hin1I	GRCGYC	3 cut(s)	200, 303, 1324
Hin1II	CATG	6 cut(s)	199, 278, 1049, 1082, 1478, 1565
Hin6I	GCGC	8 cut(s)	37, 92, 176, 188, 278, 303, 669, 1542
HinP1I	GCGC	8 cut(s)	37, 92, 176, 188, 278, 303, 669, 1542
HincII	GTYRAC	1 cut(s)	217
HindII	GTYRAC	1 cut(s)	217
HinfI	GANTC	9 cut(s)	22, 255, 343, 487, 926, 1070, 1151, 1331, 1355
HpaII	CCGG	5 cut(s)	77, 89, 329, 368, 1368
HphI	GGTGA	2 cut(s)	1181, 1382
Hpy166II	GTNNAC	3 cut(s)	31, 217, 546
Hpy188I	TCNGA	8 cut(s)	9, 254, 381, 665, 868, 917, 931, 1666
Hpy188III	TCNNGA	7 cut(s)	653, 809, 977, 1003, 1178, 1199, 1328
Hpy8I	GTNNAC	3 cut(s)	31, 217, 546
Hpy99I	CGWCG	8 cut(s)	205, 214, 224, 227, 230, 233, 236, 239
HpyAV	CCTTC	5 cut(s)	126, 528, 734, 769, 1217
HpyCH4III	ACNGT	5 cut(s)	139, 214, 457, 890, 1548
HpyCH4IV	ACGT	3 cut(s)	592, 610, 1324
HpyCH4V	TGCA	7 cut(s)	434, 449, 728, 818, 1042, 1307, 1700
HpyF3I	CTNAG	5 cut(s)	99, 705, 1400, 1598, 1663
HpySE526I	ACGT	3 cut(s)	592, 610, 1324
Hsp92I	GRCGYC	3 cut(s)	200, 303, 1324
Hsp92II	CATG	6 cut(s)	199, 278, 1049, 1082, 1478, 1565
HspAI	GCGC	8 cut(s)	37, 92, 176, 188, 278, 303, 669, 1542
KasI	GGCGCC	1 cut(s)	302
KroI	GCCGGC	1 cut(s)	88
KroNI	GCCGGC	1 cut(s)	90
Kzo9I	GATC	8 cut(s)	4, 241, 356, 428, 511, 1174, 1372, 1651
LguI	GCTCTTC	1 cut(s)	1456
LmnI	GCTCC	6 cut(s)	45, 666, 709, 918, 1105, 1594
Lsp1109I	GCAGC	9 cut(s)	72, 190, 589, 790, 802, 911, 914, 1054, 1551
LweI	GCATC	5 cut(s)	425, 503, 1282, 1555, 1643
MaeI	CTAG	5 cut(s)	354, 734, 809, 1271, 1467
MaeII	ACGT	3 cut(s)	592, 610, 1324
MaeIII	GTNAC	1 cut(s)	1208
MalI	GATC	8 cut(s)	6, 243, 358, 430, 513, 1176, 1374, 1653
MbiI	CCGCTC	1 cut(s)	48
MboI	GATC	8 cut(s)	4, 241, 356, 428, 511, 1174, 1372, 1651
MflI	RGATCY	2 cut(s)	356, 428
MlsI	TGGCCA	1 cut(s)	264
MluCI	AATT	5 cut(s)	784, 849, 1122, 1189, 1611
MluNI	TGGCCA	1 cut(s)	264
Mly113I	GGCGCC	1 cut(s)	303
MlyI	GAGTC	3 cut(s)	31, 337, 481
Mox20I	TGGCCA	1 cut(s)	264
MreI	CGCCGGCG	1 cut(s)	88
MroNI	GCCGGC	1 cut(s)	88
MroXI	GAANNNNTTC	1 cut(s)	996
MscI	TGGCCA	1 cut(s)	264
MseI	TTAA	3 cut(s)	567, 971, 1416
Msp20I	TGGCCA	1 cut(s)	264
MspA1I	CMGCKG	2 cut(s)	181, 905
MspI	CCGG	5 cut(s)	77, 89, 329, 368, 1368
MspR9I	CCNGG	4 cut(s)	66, 261, 582, 752
MvaI	CCWGG	4 cut(s)	66, 261, 582, 752
MvnI	CGCG	5 cut(s)	37, 106, 122, 176, 550
NaeI	GCCGGC	1 cut(s)	90
NarI	GGCGCC	1 cut(s)	303
NdeI	CATATG	2 cut(s)	1052, 1111
NdeII	GATC	8 cut(s)	4, 241, 356, 428, 511, 1174, 1372, 1651
NgoMIV	GCCGGC	1 cut(s)	88
NlaIII	CATG	6 cut(s)	199, 278, 1049, 1082, 1478, 1565
NlaIV	GGNNCC	4 cut(s)	55, 149, 251, 304
NmeAIII	GCCGAG	1 cut(s)	325
NmuCI	GTSAC	1 cut(s)	1208
NsbI	TGCGCA	1 cut(s)	189
PciSI	GCTCTTC	1 cut(s)	1456
PcsI	WCGNNNNNNNCGW	4 cut(s)	225, 228, 231, 234
PdiI	GCCGGC	1 cut(s)	90
PdmI	GAANNNNTTC	1 cut(s)	996
PfeI	GAWTC	6 cut(s)	255, 926, 1070, 1151, 1331, 1355
PleI	GAGTC	3 cut(s)	30, 337, 481
PluTI	GGCGCC	1 cut(s)	306
PpsI	GAGTC	3 cut(s)	30, 337, 481
Ppu21I	YACGTR	1 cut(s)	611
PshBI	ATTAAT	1 cut(s)	1416
PsiI	TTATAA	1 cut(s)	1677
Psp6I	CCWGG	4 cut(s)	64, 259, 580, 750
PspFI	CCCAGC	1 cut(s)	1606
PspGI	CCWGG	4 cut(s)	64, 259, 580, 750
PspN4I	GGNNCC	4 cut(s)	55, 149, 251, 304
PspPI	GGNCC	1 cut(s)	1312
PstI	CTGCAG	2 cut(s)	436, 1702
PstNI	CAGNNNCTG	2 cut(s)	455, 929
PsuI	RGATCY	2 cut(s)	356, 428
RsaI	GTAC	3 cut(s)	32, 630, 1473
RsaNI	GTAC	3 cut(s)	31, 629, 1472
SapI	GCTCTTC	1 cut(s)	1456
SaqAI	TTAA	3 cut(s)	567, 971, 1416
Sau3AI	GATC	8 cut(s)	4, 241, 356, 428, 511, 1174, 1372, 1651
Sau96I	GGNCC	1 cut(s)	1312
SchI	GAGTC	3 cut(s)	31, 337, 481
ScrFI	CCNGG	4 cut(s)	66, 261, 582, 752
SfaNI	GCATC	5 cut(s)	425, 503, 1282, 1555, 1643
SfcI	CTRYAG	3 cut(s)	432, 456, 1698
SfoI	GGCGCC	1 cut(s)	304
SgrAI	CRCCGGYG	1 cut(s)	88
SmlI	CTYRAG	3 cut(s)	713, 975, 1001
SmoI	CTYRAG	3 cut(s)	713, 975, 1001
Sse9I	AATT	5 cut(s)	784, 849, 1122, 1189, 1611
SspDI	GGCGCC	1 cut(s)	302
SspI	AATATT	2 cut(s)	649, 1231
SspMI	CTAG	5 cut(s)	354, 734, 809, 1271, 1467
StyD4I	CCNGG	4 cut(s)	64, 259, 580, 750
TaaI	ACNGT	5 cut(s)	139, 214, 457, 890, 1548
TaiI	ACGT	3 cut(s)	595, 613, 1327
TaqI	TCGA	3 cut(s)	1482, 1650, 1707
TasI	AATT	5 cut(s)	784, 849, 1122, 1189, 1611
TatI	WGTACW	2 cut(s)	30, 1471
TauI	GCSGC	7 cut(s)	109, 164, 173, 176, 184, 271, 1527
TfiI	GAWTC	6 cut(s)	255, 926, 1070, 1151, 1331, 1355
Tru1I	TTAA	3 cut(s)	567, 971, 1416
Tru9I	TTAA	3 cut(s)	567, 971, 1416
TscAI	CASTG	5 cut(s)	33, 47, 441, 895, 1222
TseFI	GTSAC	1 cut(s)	1208
TseI	GCWGC	9 cut(s)	60, 178, 602, 803, 815, 899, 902, 1042, 1539
Tsp45I	GTSAC	1 cut(s)	1208
TspDTI	ATGAA	5 cut(s)	603, 630, 851, 1128, 1707
TspGWI	ACGGA	1 cut(s)	351
TspRI	CASTG	5 cut(s)	33, 47, 441, 895, 1222
VspI	ATTAAT	1 cut(s)	1416
XagI	CCTNNNNNAGG	1 cut(s)	481
XapI	RAATTY	1 cut(s)	784
XbaI	TCTAGA	1 cut(s)	808
XmnI	GAANNNNTTC	1 cut(s)	996
XspI	CTAG	5 cut(s)	354, 734, 809, 1271, 1467
ZraI	GACGTC	1 cut(s)	1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.