RchiOBHm_Chr5g0046211

Glutathione S-transferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
42275666 .. 42286139
10474 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 315 bp
ATGATGAGGTGTATAGTTTTAAGATTCCTTGGGGCCCCTCTTCAGTACATTGACGAGGTTAGGACTGTTAAGCCACTCTTGCCCTCCAATCCTTACCTCACATCCCAAGCCAAGTTCTGGGCCGACTTTGTGGACAATAAGATACATGGTTTGGGGAGGAAGACATGGACAACTAAGGGAGACGAACAGGAGGCAGCAAAGAAGGAATACATTGACTGCATTAAGTTGCTAGAAGTGGAGCTTGGGGACAAGCCTTCCTTTGGCGGCGAGACCCTCGGATTTGTTTTGCTTCTGCAGTTGTATGACCAAGATTGA

Protein Analysis

104

Amino Acids

11.88

Weight (kDa)

5.38

Isoelectric Point (pI)

21.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 117
AciI CCGC 1 cut(s) 264
AcuI CTGAAG 1 cut(s) 26
AfaI GTAC 1 cut(s) 47
AfiI CCNNNNNNNGG 2 cut(s) 117, 260
AjuI GAANNNNNNNTTGG 2 cut(s) 225, 257
AluBI AGCT 1 cut(s) 241
AluI AGCT 1 cut(s) 241
Alw26I GTCTC 2 cut(s) 174, 263
AoxI GGCC 2 cut(s) 33, 120
ApaI GGGCCC 1 cut(s) 37
ApeKI GCWGC 1 cut(s) 194
AspS9I GGNCC 3 cut(s) 33, 34, 120
BaeGI GKGCMC 1 cut(s) 37
BanII GRGCYC 1 cut(s) 37
BbsI GAAGAC 1 cut(s) 167
BbvI GCAGC 1 cut(s) 206
BcoDI GTCTC 2 cut(s) 174, 263
BfaI CTAG 1 cut(s) 230
BfmI CTRYAG 1 cut(s) 293
BisI GCNGC 2 cut(s) 195, 265
BlsI GCNGC 2 cut(s) 196, 266
BmgT120I GGNCC 3 cut(s) 33, 34, 120
BmiI GGNNCC 3 cut(s) 34, 35, 36
BpiI GAAGAC 1 cut(s) 167
BsaI GGTCTC 1 cut(s) 263
BsaJI CCNNGG 2 cut(s) 28, 274
Bsc4I CCNNNNNNNGG 2 cut(s) 117, 260
BseDI CCNNGG 2 cut(s) 28, 274
BseGI GGATG 1 cut(s) 101
BseLI CCNNNNNNNGG 2 cut(s) 117, 260
BseSI GKGCMC 1 cut(s) 37
BseXI GCAGC 1 cut(s) 206
BshFI GGCC 2 cut(s) 35, 122
BslFI GGGAC 1 cut(s) 260
BslI CCNNNNNNNGG 2 cut(s) 117, 260
BsmAI GTCTC 2 cut(s) 174, 263
BsmBI CGTCTC 1 cut(s) 174
BsmFI GGGAC 1 cut(s) 260
BsnI GGCC 2 cut(s) 35, 122
Bso31I GGTCTC 1 cut(s) 263
Bsp120I GGGCCC 1 cut(s) 33
Bsp1286I GDGCHC 1 cut(s) 37
BspACI CCGC 1 cut(s) 264
BspANI GGCC 2 cut(s) 35, 122
BspLI GGNNCC 3 cut(s) 34, 35, 36
BspMAI CTGCAG 1 cut(s) 297
BspTNI GGTCTC 1 cut(s) 263
BssECI CCNNGG 2 cut(s) 28, 274
BssT1I CCWWGG 1 cut(s) 28
Bst4CI ACNGT 1 cut(s) 67
Bst6I CTCTTC 1 cut(s) 45
BstDEI CTNAG 1 cut(s) 174
BstF5I GGATG 1 cut(s) 101
BstMAI GTCTC 2 cut(s) 174, 263
BstMWI GCNNNNNNNGC 1 cut(s) 79
BstSFI CTRYAG 1 cut(s) 293
BstSLI GKGCMC 1 cut(s) 37
BstV1I GCAGC 1 cut(s) 206
BstV2I GAAGAC 1 cut(s) 167
BsuRI GGCC 2 cut(s) 35, 122
BtsCI GGATG 1 cut(s) 101
Cfr13I GGNCC 3 cut(s) 33, 34, 120
Csp6I GTAC 1 cut(s) 46
CviAII CATG 2 cut(s) 146, 165
CviJI RGCY 6 cut(s) 35, 73, 110, 122, 241, 253
CviKI_1 RGCY 6 cut(s) 35, 73, 110, 122, 241, 253
CviQI GTAC 1 cut(s) 46
DdeI CTNAG 1 cut(s) 174
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
Eco130I CCWWGG 1 cut(s) 28
Eco24I GRGCYC 1 cut(s) 37
Eco31I GGTCTC 1 cut(s) 263
Eco57I CTGAAG 1 cut(s) 26
EcoO109I RGGNCCY 2 cut(s) 33, 34
EcoT14I CCWWGG 1 cut(s) 28
EcoT38I GRGCYC 1 cut(s) 37
ErhI CCWWGG 1 cut(s) 28
Esp3I CGTCTC 1 cut(s) 174
FaeI CATG 2 cut(s) 149, 168
FaiI YATR 4 cut(s) 14, 147, 166, 303
FalI AAGNNNNNCTT 6 cut(s) 62, 94, 225, 257, 242, 274
FaqI GGGAC 1 cut(s) 260
FatI CATG 2 cut(s) 145, 164
Fnu4HI GCNGC 2 cut(s) 195, 265
FokI GGATG 1 cut(s) 88
FriOI GRGCYC 1 cut(s) 37
Fsp4HI GCNGC 2 cut(s) 195, 265
FspBI CTAG 1 cut(s) 230
GluI GCNGC 2 cut(s) 195, 265
HaeIII GGCC 2 cut(s) 35, 122
Hin1II CATG 2 cut(s) 149, 168
HinfI GANTC 1 cut(s) 24
Hpy166II GTNNAC 1 cut(s) 133
Hpy188I TCNGA 1 cut(s) 278
Hpy8I GTNNAC 1 cut(s) 133
HpyAV CCTTC 2 cut(s) 196, 264
HpyCH4III ACNGT 1 cut(s) 67
HpyCH4V TGCA 2 cut(s) 219, 295
HpyF10VI GCNNNNNNNGC 1 cut(s) 79
HpyF3I CTNAG 1 cut(s) 174
Hsp92II CATG 2 cut(s) 149, 168
LmnI GCTCC 1 cut(s) 238
LpnPI CCDG 2 cut(s) 103, 173
Lsp1109I GCAGC 1 cut(s) 206
MaeI CTAG 1 cut(s) 230
MboII GAAGA 2 cut(s) 32, 172
MhlI GDGCHC 1 cut(s) 37
MnlI CCTC 7 cut(s) 48, 49, 94, 107, 150, 184, 284
MseI TTAA 3 cut(s) 20, 69, 222
MwoI GCNNNNNNNGC 1 cut(s) 79
NlaIII CATG 2 cut(s) 149, 168
NlaIV GGNNCC 3 cut(s) 34, 35, 36
PfeI GAWTC 1 cut(s) 24
PflMI CCANNNNNTGG 1 cut(s) 117
PkrI GCNGC 2 cut(s) 196, 266
PspN4I GGNNCC 3 cut(s) 34, 35, 36
PspOMI GGGCCC 1 cut(s) 33
PspPI GGNCC 3 cut(s) 33, 34, 120
PstI CTGCAG 1 cut(s) 297
RsaI GTAC 1 cut(s) 47
RsaNI GTAC 1 cut(s) 46
SaqAI TTAA 3 cut(s) 20, 69, 222
SatI GCNGC 2 cut(s) 195, 265
Sau96I GGNCC 3 cut(s) 33, 34, 120
SduI GDGCHC 1 cut(s) 37
SetI ASST 4 cut(s) 11, 60, 99, 243
SfcI CTRYAG 1 cut(s) 293
SsiI CCGC 1 cut(s) 264
SspMI CTAG 1 cut(s) 230
StyI CCWWGG 1 cut(s) 28
TaaI ACNGT 1 cut(s) 67
TatI WGTACW 1 cut(s) 45
TauI GCSGC 1 cut(s) 267
TfiI GAWTC 1 cut(s) 24
Tru1I TTAA 3 cut(s) 20, 69, 222
Tru9I TTAA 3 cut(s) 20, 69, 222
TseI GCWGC 1 cut(s) 194
Van91I CCANNNNNTGG 1 cut(s) 117
XspI CTAG 1 cut(s) 230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.