Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004774

Physical Location & Seq

Genomic Coordinates Forward (+)

6930896 .. 6938634

Gene Structure 7739 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3156 bp

ATGGGGACTGAAAATCCTGGTCGACCAAATTTTACTCCAAGACCTACCACTACACCTTTTGCTGCTCCTCCTCGGACCATGACGCCTTTTACATCTTCAGGTCCTGTGGTTGGACAAGAGGCATCTGGTTTTAGACCACCTCCACAGACACCTTTCTCTTCGTCTGGGCCTGTGGTTGGATCAGATGTTTCTACCTTCAGACCTCCTCCACCAGCTCCTCCACAGGCTACCATGCCTTTCTCATCTTTTGGGCCTGCAGGTGGACCACAGACCTCTCCCTTTAGGCCTAGCACACCAGCTAGGTTTAATGATCCATCCGTGCCTCCTCCACCAACAGCAAATGCCCCACCGACTGCTGGATCTTTCTCCCGTTTCCCGACTCCACCATTTTCTTCAACACCACAGTTTCCTTCGACAGCGCCACCACCCCCTTCCCGTCCTCCACCTATGGGCCAACTACCTTTTCAACCTCCAGGAGGTCAAGCTCCATTTCAACGACCACAGCAGCCGATGCCTTCTGTACAAATGGGATCTCCACCTCAAACTATAAATTCTGCTCCACCAGGTATGAGTCTTCATCAGTCTCCATCAGATTCGTCCTTCCCAGCTCCCCAGCCAAAGGCTCAGACATCTTTCCCGGGATATGCACGTGGAAATCCACAAGTCCCACCAGCTCAGTCTCCATTTCTTACTCATCAAGGAGGCTTTCCCGCTCCACCTGCAGCATCTTCCCCTTTCGCTGCTCAGCAAGTGGGTTATGGAATACCTCCACCGGTGGCAGCTCCACTGGGTCTGCAGTCGCAACATCCTGGCTCCGGACCCCCACTTGGTGGTGTCCAAGCCTTGACAGAGGACTTCAGCTCATTATCTGTTGGATCTGTTCCCGGATCAATTGAACCTGGAATTGACCCTAAAGCTCTGCCGAGGCCTTTGTGTGGTGATGTGGAGCCAAAACCACTTGCTGAGATGTTCCCCTTGAACTGCAATCCTAGATTTTTAAGGCTTACAACGGGTGCAATACCAAGTTCCCAGTCTTTGTCGTCAAGGTGGCATCTACCTCTGGGTGCTGTTGTTTGTCCACTTGCCGAATCACCTGATGGGGAGGAAGTGCCAGTGGTTAATTTTGGTGCTGCTGGGATTATTCGCTGTAGAAGATGTCGGACATATGTAAACCCATATGTGACATTTACAGATGCTGGAAGAAAGTGGCGTTGCAATATCTGTGCTCTACTTAATGATGTTCCAGGCGATTACTTTGCCAATTTGGATGCCACTGGCAGAAGAATTGATACGGACCAGCGACCTGAGCTTACACATGGTAGTGTGGAATTTGTTGCTCCAACTGAATATATGGTGCGGGCTCCTATGCCGCCACTGTATTTTTTCCTCATCGACGTTTCTTCATCCGCAGTGAGAAGTGGTATGATTGAGGTTGTGGCCCAAACTATTCGGTCATGCTTGGATGACCTGCCTGGCCACCCCAGAACACAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAATATGAAGTCTTCTTTAACTCAGCCTCAAATGATGGTGGTCTCAGATTTGGATGACGTATTTGTCCCATTGCCAGATGATCTTCTGGTCAACTTATCTGAATCAAGAAGTGTTGTGGAGACCTTCCTAGATAGCTTGCCGTCTATGTTCCAGGACAACTCAAATGTGGAGTCTGCTTTTGGTCCAGCTCTTAAAGCCGCACTTATGCTTATGAGTCAACTTGGTGGAAAATTGTTGATTTTTCAAAATACACTTCCATCTCTTGGTGTTGGCCGCTTGAAATTGCGTGGAGATGATCTTCGTGTCTATGGAACAGATAAAGAACATCCTCTAAGACTACCAGAAGATCCTTTCTACAAGCAGATGGCTGCAGAATTTACCAAGTTCCAGATAGGAGTAAACGTATATGCCTTCAGTGACAAGTACACTGATATAGCCTCATTAGGTACTCTGGCAAAATATACCGGGGGTCAGGTGTACTATTACCCAAATTTCCAATCTACCATTCATGGAGAGAAGTTGAGACATGAGTTAGCCAGAGATCTTACTAGGGAAACTGCCTGGGAGGCAGTCATGCGCATAAGATGTGGAAAAGGAGTCCGCTTTACATCTTATCACGGGAACTTTATGCTGAGGTCCACCGATTTATTAGCACTTCCAGCTGTAGATTGTGATAAAGCATTTGCGATGCAGCTCTCACTTGAAGAGACATTACTAACTATTCAAACAGTATACTTCCAAGTAGCTTTACTATATACTGCATCCTGCGGAGAAAGGCGTATTAGAGTACATACAGCAGCAGTACCTGTTGTTACAGATCTGGGAGAGATGTATCGCCAGGCTGACACTGGTGCTATTGTCACCTTGCTTTCCAGGCTAGCAATAGAAAAGACTTTGTCGAGTAAGTTGGAAGATGCTCGGAACTCTTTGCAGCTTAGAATTGTCAAAGCCCTTAAAGAATTTAGAAATCTTTATGCTGTACAACACCGTTTGGGAGGGAAGATGATATATCCAGAGTCTCTGAAGTTCTTACCTATGTATGGATTAGCACTTTGTAAGTCAGCACCTCTCCGTGGGGGGTATGCAGATGTATCACTTGATGAACGGTGTGCGGCAGGCCACACAATGATGACTCTACCAGTTAAAAAATTGTTGAAGCTTCTATACCCTAGTTTAATACGGCTCGATGAGTATCTTTTGAAGCCTTCTGCTGATGCTGATGACTTCAACAGCATAGAGAATAGATTACCACTAGTAGCTGAGAGCTTAGATTCCAGAGGCCTTTACATATATGATGATGGGTTTCGCTTTGTTCTATGGTTTGGTAGAGTTCTTCCACCTGATATAGCAAAGAATCTTCTTGGGGCTGACTTTGCAGCCGAGTTATCAAAGGTCACCCTTTGTGAGCGTGATAATGAAATGTCAAAGAAGCTAATGAGGATACTTAAGAAATTTAGAGAAAGTGATCCTTCATATCATCAATTATGTTATCTTGTAAGACAAGGAGAGCAGCCACGAGAAGGTCATCTCCTCCTTGCCAATCTTGTTGAGGAACAGATGGGGGGGACCAACAGTTATGTTGATTGGATACTTCAGGTACACCGGCAAGTCCAGCAAAATCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0006275 GO:0006996 GO:0007029 GO:0007030 GO:0007276 GO:0008150 GO:0008156 GO:0008361 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010256 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010948 GO:0016043 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032504 GO:0032535 GO:0032875 GO:0032876 GO:0044703 GO:0045786 GO:0045934 GO:0048232 GO:0048519 GO:0048523 GO:0048609 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051704 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0071840 GO:0080090 GO:0080119 GO:0090066 GO:0090329 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Gelsolin Sec23_BS Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

1051

Amino Acids

114.79

Weight (kDa)

7.54

Isoelectric Point (pI)

56.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-Sec23_Sec24	PF04810	380 - 418	1.2e-17	Sec23/Sec24 zinc finger
Sec23_trunk	PF04811	455 - 691	6.9e-84	Sec23/Sec24 trunk domain
Sec23_BS	PF08033	697 - 781	8.1e-25	Sec23/Sec24 beta-sandwich domain
Sec23_helical	PF04815	792 - 895	1.4e-24	Sec23/Sec24 helical domain
Gelsolin	PF00626	927 - 992	2.5e-06	Gelsolin repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004774)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07100
fragaria_vesca	FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220 FvH4_6g08220
malus_domestica	MD04G1188900.v1.1 MD12G1201700.v1.1
prunus_persica	Prupe.6G306800_v2.0.a1 Prupe.6G306800_v2.0.a1 Prupe.6G306800_v2.0.a1
pyrus_communis	pycom04g16720 pycom04g16730 pycom12g18800 pycom12g18810
rosa_chinensis	RchiOBHm_Chr3g0458141
rosa_laevigata	RLG00000025175
rosa_multiflora	Rmu_sc0019452.1_g000001
rosa_roxburghii	Rroxscaffold_6G00421270
rosa_rugosa	Rorug03G0024700 Rorug03G0024800 Rorug03G0024900 Rorug03G0024900 Rorug03G0025000
rosa_samantha	Rh3AG085700 Rh3BG088400 Rh3CG089000 Rh3DG089400
rosa_wichuraiana	Rw3G007280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1530
AarI	CACCTGC	2 cut(s)	248, 727
AasI	GACNNNNNNGTC	1 cut(s)	1592
Acc16I	TGCGCA	1 cut(s)	2108
Acc36I	ACCTGC	3 cut(s)	248, 727, 1476
AccB7I	CCANNNNNTGG	2 cut(s)	830, 1793
AccBSI	CCGCTC	1 cut(s)	713
AccI	GTMKAC	2 cut(s)	22, 2262
AccIII	TCCGGA	1 cut(s)	815
AciI	CCGC	9 cut(s)	711, 1357, 1370, 1407, 1728, 1804, 2131, 2298, 2642
AclWI	GGATC	8 cut(s)	187, 305, 367, 538, 883, 895, 1871, 2990
AcoI	YGGCCR	2 cut(s)	1474, 1801
AcsI	RAATTY	7 cut(s)	28, 550, 1328, 1904, 2020, 2489, 2981
AcuI	CTGAAG	6 cut(s)	81, 181, 841, 1927, 2573, 3107
AcvI	CACGTG	1 cut(s)	650
AcyI	GRCGYC	1 cut(s)	83
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	8 cut(s)	522, 1955, 1978, 2009, 2319, 2334, 2511, 3129
AflII	CTTAAG	1 cut(s)	2975
AgeI	ACCGGT	1 cut(s)	772
AhlI	ACTAGT	1 cut(s)	2782
AjuI	GAANNNNNNNTTGG	4 cut(s)	447, 479, 2019, 2051
Alw21I	GWGCWC	1 cut(s)	1228
Alw26I	GTCTC	7 cut(s)	588, 684, 1576, 1643, 2047, 2231, 2553
AlwI	GGATC	8 cut(s)	187, 305, 367, 538, 883, 895, 1871, 2990
AlwNI	CAGNNNCTG	3 cut(s)	104, 1196, 2336
Ama87I	CYCGRG	1 cut(s)	637
Aor13HI	TCCGGA	1 cut(s)	815
ApoI	RAATTY	7 cut(s)	28, 550, 1328, 1904, 2020, 2489, 2981
ArsI	GACNNNNNNTTYG	2 cut(s)	1685, 1717
AsiGI	ACCGGT	1 cut(s)	772
AspLEI	GCGC	2 cut(s)	421, 2109
AsuC2I	CCSGG	4 cut(s)	638, 639, 885, 1996
AsuHPI	GGTGA	4 cut(s)	950, 1083, 2383, 2917
AsuNHI	GCTAGC	1 cut(s)	2407
AvaI	CYCGRG	1 cut(s)	637
AvaII	GGWCC	8 cut(s)	75, 101, 263, 818, 1294, 1712, 2166, 3096
BalI	TGGCCA	1 cut(s)	1476
BanII	GRGCYC	1 cut(s)	1363
BarI	GAAGNNNNNNTAC	6 cut(s)	1273, 1305, 2226, 2258, 2678, 2710
BauI	CACGAG	1 cut(s)	3045
BbrPI	CACGTG	1 cut(s)	650
BbsI	GAAGAC	2 cut(s)	566, 1533
Bbv12I	GWGCWC	1 cut(s)	1228
BbvCI	CCTCAGC	1 cut(s)	2162
BccI	CCATC	8 cut(s)	322, 595, 1091, 1558, 1795, 1888, 2822, 3082
BceAI	ACGGC	2 cut(s)	1654, 2726
BcgI	CGANNNNNNTGC	2 cut(s)	1238, 1272
BciVI	GTATCC	2 cut(s)	2964, 3111
BcnI	CCSGG	4 cut(s)	638, 639, 885, 1996
BcoDI	GTCTC	7 cut(s)	588, 684, 1576, 1643, 2047, 2231, 2553
BcuI	ACTAGT	1 cut(s)	2782
BfaI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783
BfmI	CTRYAG	6 cut(s)	255, 720, 794, 1147, 1899, 2193
BfoI	RGCGCY	1 cut(s)	422
BfrI	CTTAAG	1 cut(s)	2975
BfuAI	ACCTGC	3 cut(s)	248, 727, 1476
BfuI	GTATCC	2 cut(s)	2964, 3111
BglI	GCCNNNNNGGC	1 cut(s)	2096
BglII	AGATCT	2 cut(s)	2071, 2347
BlpI	GCTNAGC	1 cut(s)	744
Bme18I	GGWCC	8 cut(s)	75, 101, 263, 818, 1294, 1712, 2166, 3096
BmeT110I	CYCGRG	1 cut(s)	637
BmiI	GGNNCC	5 cut(s)	814, 820, 948, 1362, 3097
BmrI	ACTGGG	2 cut(s)	797, 1024
BmtI	GCTAGC	1 cut(s)	2411
BmuI	ACTGGG	2 cut(s)	797, 1024
BpiI	GAAGAC	2 cut(s)	566, 1533
BpmI	CTGGAG	1 cut(s)	456
Bpu10I	CCTNAGC	2 cut(s)	1305, 2162
Bpu1102I	GCTNAGC	1 cut(s)	744
BpuMI	CCSGG	4 cut(s)	638, 639, 885, 1996
BsaAI	YACGTR	1 cut(s)	650
BsaBI	GATNNNNATC	1 cut(s)	2721
BsaHI	GRCGYC	1 cut(s)	83
BsaI	GGTCTC	2 cut(s)	1576, 1643
BsaJI	CCNNGG	6 cut(s)	71, 637, 923, 1995, 2091, 2602
BsaWI	WCCGGW	2 cut(s)	772, 815
BsaXI	ACNNNNNCTCC	2 cut(s)	1917, 1947
Bse118I	RCCGGY	2 cut(s)	772, 3132
Bse1I	ACTGG	6 cut(s)	792, 1030, 1112, 1279, 2383, 2669
Bse3DI	GCAATG	1 cut(s)	1598
Bse8I	GATNNNNATC	1 cut(s)	2721
BseAI	TCCGGA	1 cut(s)	815
BseDI	CCNNGG	6 cut(s)	71, 637, 923, 1995, 2091, 2602
BseGI	GGATG	8 cut(s)	314, 805, 1273, 1403, 1468, 1588, 1855, 2291
BseJI	GATNNNNATC	1 cut(s)	2721
BseMI	GCAATG	1 cut(s)	1598
BseMII	CTCAG	9 cut(s)	638, 689, 758, 954, 1296, 1565, 1587, 2153, 2781
BseNI	ACTGG	6 cut(s)	792, 1030, 1112, 1279, 2383, 2669
BseRI	GAGGAG	6 cut(s)	57, 60, 195, 207, 315, 3050
BseYI	CCCAGC	3 cut(s)	604, 612, 1133
BshTI	ACCGGT	1 cut(s)	772
BsiHKAI	GWGCWC	1 cut(s)	1228
BsiHKCI	CYCGRG	1 cut(s)	637
BsiSI	CCGG	6 cut(s)	638, 773, 816, 885, 1995, 3133
BslFI	GGGAC	4 cut(s)	19, 650, 1580, 3109
BsmAI	GTCTC	7 cut(s)	588, 684, 1576, 1643, 2047, 2231, 2553
BsmFI	GGGAC	4 cut(s)	19, 650, 1580, 3109
Bso31I	GGTCTC	2 cut(s)	1576, 1643
BsoBI	CYCGRG	1 cut(s)	637
Bsp1286I	GDGCHC	2 cut(s)	1228, 1363
Bsp13I	TCCGGA	1 cut(s)	815
Bsp1407I	TGTACA	2 cut(s)	520, 2509
Bsp1720I	GCTNAGC	1 cut(s)	744
BspACI	CCGC	9 cut(s)	711, 1357, 1370, 1407, 1728, 1804, 2131, 2298, 2642
BspCNI	CTCAG	9 cut(s)	637, 688, 757, 955, 1297, 1564, 1586, 2154, 2782
BspEI	TCCGGA	1 cut(s)	815
BspLI	GGNNCC	5 cut(s)	814, 820, 948, 1362, 3097
BspMAI	CTGCAG	4 cut(s)	259, 724, 798, 1903
BspMI	ACCTGC	3 cut(s)	248, 727, 1476
BspOI	GCTAGC	1 cut(s)	2411
BspPI	GGATC	8 cut(s)	187, 305, 367, 538, 883, 895, 1871, 2990
BspTI	CTTAAG	1 cut(s)	2975
BspTNI	GGTCTC	2 cut(s)	1576, 1643
BsrBI	CCGCTC	1 cut(s)	713
BsrDI	GCAATG	1 cut(s)	1598
BsrFI	RCCGGY	2 cut(s)	772, 3132
BsrGI	TGTACA	2 cut(s)	520, 2509
BsrI	ACTGG	6 cut(s)	792, 1030, 1112, 1279, 2383, 2669
BssAI	RCCGGY	2 cut(s)	772, 3132
BssECI	CCNNGG	6 cut(s)	71, 637, 923, 1995, 2091, 2602
BssNAI	GTATAC	1 cut(s)	2263
BssNI	GRCGYC	1 cut(s)	83
BssSI	CACGAG	1 cut(s)	3045
Bst1107I	GTATAC	1 cut(s)	2263
Bst2BI	CACGAG	1 cut(s)	3045
Bst4CI	ACNGT	6 cut(s)	405, 1377, 2260, 2519, 2637, 3104
Bst6I	CTCTTC	2 cut(s)	163, 2229
BstACI	GRCGYC	1 cut(s)	83
BstAFI	CTTAAG	1 cut(s)	2975
BstAPI	GCANNNNNTGC	1 cut(s)	511
BstAUI	TGTACA	2 cut(s)	520, 2509
BstBAI	YACGTR	1 cut(s)	650
BstC8I	GCNNGC	5 cut(s)	255, 1359, 1667, 2409, 2647
BstDSI	CCRYGG	1 cut(s)	2602
BstEII	GGTNACC	1 cut(s)	2923
BstENI	CCTNNNNNAGG	1 cut(s)	474
BstF5I	GGATG	8 cut(s)	314, 805, 1273, 1403, 1468, 1588, 1855, 2291
BstH2I	RGCGCY	1 cut(s)	422
BstHHI	GCGC	2 cut(s)	421, 2109
BstMAI	GTCTC	7 cut(s)	588, 684, 1576, 1643, 2047, 2231, 2553
BstMWI	GCNNNNNNNGC	9 cut(s)	511, 719, 1306, 1724, 2096, 2189, 2404, 2903, 3142
BstPI	GGTNACC	1 cut(s)	2923
BstSFI	CTRYAG	6 cut(s)	255, 720, 794, 1147, 1899, 2193
BstV2I	GAAGAC	2 cut(s)	566, 1533
BstX2I	RGATCY	6 cut(s)	359, 530, 875, 1876, 2071, 2347
BstYI	RGATCY	6 cut(s)	359, 530, 875, 1876, 2071, 2347
BstZ17I	GTATAC	1 cut(s)	2263
BsuI	GTATCC	2 cut(s)	2964, 3111
BtgI	CCRYGG	1 cut(s)	2602
BtgZI	GCGATG	1 cut(s)	2231
BtsCI	GGATG	8 cut(s)	314, 805, 1273, 1403, 1468, 1588, 1855, 2291
BtsI	GCAGTG	1 cut(s)	1416
BtsIMutI	CAGTG	8 cut(s)	785, 1119, 1272, 1373, 1416, 1951, 1956, 2376
BveI	ACCTGC	3 cut(s)	248, 727, 1476
Cac8I	GCNNGC	5 cut(s)	255, 1359, 1667, 2409, 2647
CaiI	CAGNNNCTG	3 cut(s)	104, 1196, 2336
CfoI	GCGC	2 cut(s)	421, 2109
Cfr10I	RCCGGY	2 cut(s)	772, 3132
Cfr9I	CCCGGG	1 cut(s)	637
CseI	GACGC	1 cut(s)	91
CsiI	ACCWGGT	1 cut(s)	562
Csp6I	GTAC	8 cut(s)	521, 1954, 1977, 2008, 2318, 2333, 2510, 3128
CspAI	ACCGGT	1 cut(s)	772
CviAII	CATG	7 cut(s)	79, 232, 1316, 1455, 2039, 2057, 2104
CviQI	GTAC	8 cut(s)	521, 1954, 1977, 2008, 2318, 2333, 2510, 3128
DraIII	CACNNNGTG	1 cut(s)	830
DrdI	GACNNNNNNGTC	1 cut(s)	1592
DseDI	GACNNNNNNGTC	1 cut(s)	1592
EaeI	YGGCCR	2 cut(s)	1474, 1801
Eam1104I	CTCTTC	2 cut(s)	163, 2229
EarI	CTCTTC	2 cut(s)	163, 2229
Eco147I	AGGCCT	3 cut(s)	286, 928, 2811
Eco24I	GRGCYC	1 cut(s)	1363
Eco31I	GGTCTC	2 cut(s)	1576, 1643
Eco47I	GGWCC	8 cut(s)	75, 101, 263, 818, 1294, 1712, 2166, 3096
Eco57I	CTGAAG	6 cut(s)	81, 181, 841, 1927, 2573, 3107
Eco72I	CACGTG	1 cut(s)	650
Eco88I	CYCGRG	1 cut(s)	637
Eco91I	GGTNACC	1 cut(s)	2923
EcoNI	CCTNNNNNAGG	1 cut(s)	474
EcoO109I	RGGNCCY	1 cut(s)	101
EcoO65I	GGTNACC	1 cut(s)	2923
EcoT38I	GRGCYC	1 cut(s)	1363
FaeI	CATG	7 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107
FalI	AAGNNNNNCTT	4 cut(s)	1716, 1748, 2983, 3015
FaqI	GGGAC	4 cut(s)	19, 650, 1580, 3109
FatI	CATG	7 cut(s)	78, 231, 1315, 1454, 2038, 2056, 2103
FauI	CCCGC	2 cut(s)	718, 1350
FauNDI	CATATG	2 cut(s)	1165, 1177
FblI	GTMKAC	2 cut(s)	22, 2262
FokI	GGATG	8 cut(s)	301, 792, 1280, 1390, 1475, 1595, 1842, 2278
FriOI	GRGCYC	1 cut(s)	1363
FspAI	RTGCGCAY	1 cut(s)	2108
FspBI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783
FspI	TGCGCA	1 cut(s)	2108
GlaI	GCGC	2 cut(s)	420, 2108
GsaI	CCCAGC	3 cut(s)	608, 616, 1137
GsuI	CTGGAG	1 cut(s)	456
HaeII	RGCGCY	1 cut(s)	422
HapII	CCGG	6 cut(s)	638, 773, 816, 885, 1995, 3133
HgaI	GACGC	1 cut(s)	91
HhaI	GCGC	2 cut(s)	421, 2109
Hin1I	GRCGYC	1 cut(s)	83
Hin1II	CATG	7 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107
Hin6I	GCGC	2 cut(s)	419, 2107
HinP1I	GCGC	2 cut(s)	419, 2107
HincII	GTYRAC	3 cut(s)	23, 1621, 1748
HindII	GTYRAC	3 cut(s)	23, 1621, 1748
HindIII	AAGCTT	1 cut(s)	2687
HpaII	CCGG	6 cut(s)	638, 773, 816, 885, 1995, 3133
HphI	GGTGA	4 cut(s)	950, 1083, 2383, 2917
Hpy188III	TCNNGA	6 cut(s)	376, 816, 1635, 1918, 2543, 2805
Hpy99I	CGWCG	1 cut(s)	1397
HpyCH4III	ACNGT	6 cut(s)	405, 1377, 2260, 2519, 2637, 3104
HpyCH4IV	ACGT	4 cut(s)	649, 1395, 1587, 1932
HpyF10VI	GCNNNNNNNGC	9 cut(s)	511, 719, 1306, 1724, 2096, 2189, 2404, 2903, 3142
HpySE526I	ACGT	4 cut(s)	649, 1395, 1587, 1932
Hsp92I	GRCGYC	1 cut(s)	83
Hsp92II	CATG	7 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107
HspAI	GCGC	2 cut(s)	419, 2107
Kpn2I	TCCGGA	1 cut(s)	815
MabI	ACCWGGT	1 cut(s)	562
MaeI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783
MaeII	ACGT	4 cut(s)	649, 1395, 1587, 1932
MaeIII	GTNAC	5 cut(s)	1180, 1946, 2341, 2389, 2923
MbiI	CCGCTC	1 cut(s)	713
MfeI	CAATTG	1 cut(s)	891
MflI	RGATCY	6 cut(s)	359, 530, 875, 1876, 2071, 2347
MhlI	GDGCHC	2 cut(s)	1228, 1363
MlsI	TGGCCA	1 cut(s)	1476
MluNI	TGGCCA	1 cut(s)	1476
MlyI	GAGTC	7 cut(s)	373, 580, 1709, 1753, 2136, 2555, 2656
MmeI	TCCRAC	6 cut(s)	91, 157, 853, 1139, 1364, 2418
Mox20I	TGGCCA	1 cut(s)	1476
MroI	TCCGGA	1 cut(s)	815
MscI	TGGCCA	1 cut(s)	1476
MslI	CAYNNNNRTG	2 cut(s)	1320, 2657
Msp20I	TGGCCA	1 cut(s)	1476
MspA1I	CMGCKG	1 cut(s)	2192
MspCI	CTTAAG	1 cut(s)	2975
MspI	CCGG	6 cut(s)	638, 773, 816, 885, 1995, 3133
MunI	CAATTG	1 cut(s)	891
MwoI	GCNNNNNNNGC	9 cut(s)	511, 719, 1306, 1724, 2096, 2189, 2404, 2903, 3142
NciI	CCSGG	4 cut(s)	638, 639, 885, 1996
NdeI	CATATG	2 cut(s)	1165, 1177
NheI	GCTAGC	1 cut(s)	2407
NlaIII	CATG	7 cut(s)	82, 235, 1319, 1458, 2042, 2060, 2107
NlaIV	GGNNCC	5 cut(s)	814, 820, 948, 1362, 3097
NmeAIII	GCCGAG	2 cut(s)	948, 2935
NmuCI	GTSAC	4 cut(s)	1180, 1946, 2389, 2923
NsbI	TGCGCA	1 cut(s)	2108
PaqCI	CACCTGC	2 cut(s)	248, 727
PceI	AGGCCT	3 cut(s)	286, 928, 2811
PfeI	GAWTC	5 cut(s)	593, 1088, 1631, 2801, 2884
PflFI	GACNNNGTC	1 cut(s)	2425
PflMI	CCANNNNNTGG	2 cut(s)	830, 1793
PfoI	TCCNGGA	3 cut(s)	472, 883, 1680
PinAI	ACCGGT	1 cut(s)	772
PleI	GAGTC	7 cut(s)	373, 579, 1708, 1752, 2135, 2554, 2656
PmaCI	CACGTG	1 cut(s)	650
PmlI	CACGTG	1 cut(s)	650
PpsI	GAGTC	7 cut(s)	373, 579, 1708, 1752, 2135, 2554, 2656
Ppu21I	YACGTR	1 cut(s)	650
PpuMI	RGGWCCY	1 cut(s)	101
PsiI	TTATAA	1 cut(s)	1530
Psp5II	RGGWCCY	1 cut(s)	101
PspCI	CACGTG	1 cut(s)	650
PspEI	GGTNACC	1 cut(s)	2923
PspFI	CCCAGC	3 cut(s)	604, 612, 1133
PspN4I	GGNNCC	5 cut(s)	814, 820, 948, 1362, 3097
PspPPI	RGGWCCY	1 cut(s)	101
PstI	CTGCAG	4 cut(s)	259, 724, 798, 1903
PstNI	CAGNNNCTG	3 cut(s)	104, 1196, 2336
PsuI	RGATCY	6 cut(s)	359, 530, 875, 1876, 2071, 2347
PsyI	GACNNNGTC	1 cut(s)	2425
PvuII	CAGCTG	1 cut(s)	2192
RsaI	GTAC	8 cut(s)	522, 1955, 1978, 2009, 2319, 2334, 2511, 3129
RsaNI	GTAC	8 cut(s)	521, 1954, 1977, 2008, 2318, 2333, 2510, 3128
RseI	CAYNNNNRTG	2 cut(s)	1320, 2657
SalI	GTCGAC	1 cut(s)	21
SbfI	CCTGCAGG	1 cut(s)	259
SchI	GAGTC	7 cut(s)	373, 580, 1709, 1753, 2136, 2555, 2656
SdaI	CCTGCAGG	1 cut(s)	259
SduI	GDGCHC	2 cut(s)	1228, 1363
SexAI	ACCWGGT	1 cut(s)	562
SfcI	CTRYAG	6 cut(s)	255, 720, 794, 1147, 1899, 2193
SgrAI	CRCCGGYG	1 cut(s)	772
SinI	GGWCC	8 cut(s)	75, 101, 263, 818, 1294, 1712, 2166, 3096
SmaI	CCCGGG	1 cut(s)	639
SmiMI	CAYNNNNRTG	2 cut(s)	1320, 2657
SmlI	CTYRAG	1 cut(s)	2975
SmoI	CTYRAG	1 cut(s)	2975
SpeI	ACTAGT	1 cut(s)	2782
Sse8387I	CCTGCAGG	1 cut(s)	259
SseBI	AGGCCT	3 cut(s)	286, 928, 2811
SsiI	CCGC	9 cut(s)	711, 1357, 1370, 1407, 1728, 1804, 2131, 2298, 2642
SspMI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783
StuI	AGGCCT	3 cut(s)	286, 928, 2811
TaaI	ACNGT	6 cut(s)	405, 1377, 2260, 2519, 2637, 3104
TaiI	ACGT	4 cut(s)	652, 1398, 1590, 1935
TaqI	TCGA	5 cut(s)	22, 413, 1392, 2429, 2715
TaqII	GACCGA	1 cut(s)	1440
TatI	WGTACW	5 cut(s)	520, 1953, 2007, 2317, 2509
TauI	GCSGC	4 cut(s)	1372, 1730, 1806, 2645
TfiI	GAWTC	5 cut(s)	593, 1088, 1631, 2801, 2884
TscAI	CASTG	8 cut(s)	792, 1119, 1279, 1380, 1416, 1951, 1963, 2383
TseFI	GTSAC	4 cut(s)	1180, 1946, 2389, 2923
Tsp45I	GTSAC	4 cut(s)	1180, 1946, 2389, 2923
TspDTI	ATGAA	7 cut(s)	566, 1392, 1550, 2027, 2646, 2961, 2991
TspGWI	ACGGA	4 cut(s)	307, 1307, 2591, 3141
TspMI	CCCGGG	1 cut(s)	637
TspRI	CASTG	8 cut(s)	792, 1119, 1279, 1380, 1416, 1951, 1963, 2383
Tth111I	GACNNNGTC	1 cut(s)	2425
Van91I	CCANNNNNTGG	2 cut(s)	830, 1793
Vha464I	CTTAAG	1 cut(s)	2975
VpaK11BI	GGWCC	8 cut(s)	75, 101, 263, 818, 1294, 1712, 2166, 3096
XagI	CCTNNNNNAGG	1 cut(s)	474
XapI	RAATTY	7 cut(s)	28, 550, 1328, 1904, 2020, 2489, 2981
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2375
XmaI	CCCGGG	1 cut(s)	637
XmiI	GTMKAC	2 cut(s)	22, 2262
XspI	CTAG	8 cut(s)	288, 300, 990, 1658, 2079, 2408, 2700, 2783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.