RchiOBHm_Chr2g0093681

Regulatory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0005113
Physical Location & Seq
Reverse (-)
6901442 .. 6903478
2037 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1761 bp
ATGGAATATACAAAAACTTGTTTTTCGGATTCCAACGAGGTTGTTAGCAGTAGCATAAGTATAGCTCACCACCACTCTCCCTCTTCTTCTTCACCTCCTCCTGATATCACATCCCTCAAGCACCTCTCCGATAATCTCGAACTGATAGTTGACTCCTCGTACTTTGCCGACGCCAAAATAGTCGTCGGCAACGGCCGGGAAGTCCCCGTCCACCGCTGCATCCTCGCCGCGAGGAGCTCGTTTTTCAAGAACGTCTTCTCAGCTAAAGAAGGCAGTAGCTCTATTAGGTTTGAATTGAAGAAGTTGGCGAAGGAATACGACGTTGGATTGGACTCACTGTTGGCTGTTTTGGGTTACTTGTACAGCGGCAAGCTCAAGTCTTTCACTAAAGGCGTTTGTGTTTGTGTAGACGACTCTTGTGCTCATGTTGCTTGTCGTCCCGTCGTTGATTTCATGGTGGAGGTTCTCTATGCTTCTTCAACATTTCAAATCTCAGAACTGGTCACTCTTTACCAGAGGCATTTGCTTGATATTCTTGAAAACATAACCATAGATGATGTGTTGGTGGTTCTATATGTTGCGAATATCTGTGGTAAAGCTTGTGAGAGATTGGTGGGGAGATGTATTGAGATGATAGTGAAGTCTGATGTTGATATTGTCACTCTTGAGAAAGCATTGCCTCAAGGATCCGTGAAGCGAATCACAGATTCGAGGTTGGCTCTTGGTCTGGACAGTTCTCGGAGCAGTAATGCTGCGAGTAACTTTCCGGATAAGCACACAAAGAGGATACACAGGGCTTTGGATTCTGATGATGTTGAGTTGGTTCGAATGCTGTTGAAAGAGGGGCATACGAATCTTGACGATGCGCATGCACTTCACTATGCTGTGGCATACTGTGATGCAAAGACCACAGCAGAGCTGCTTGATCTTGGAAGTGCGGATGTGAATTGCAGGAACCTGAGGGGTTACACTGTGCTGCACCTTGCGGCGACCAGGAAGGATCCTAAGATCATTGTGTCACTACTTACAAAGGGTGCTCGTCCCTCGGATGTTACATTGGATGGCAGGAAAGCTCTTCAGATCACTAAGCGTCTTACCAGAGCTGCGGATTTTTTCAACTCGAATGATGAGGGCAAGTCTTCTTCCAATGACCGCTTGTGTATAGAGATATTGGAGCAAGCAGAAGGGAGGGATCCTGTGCTTGGAGAAGCTTCTCTTTTGCTTGCGATGGCTGGCGATGATCTGCGTATGAAACTCTTGTACCTTGAGAACAGAGTTGGACTGGCAAGGTACCTGTTCCCCATGGAAGCAAAGATTGTAATGGATATTACTCAACTTGATGAAACTTCAGCGTTTCCATTAGCCTGCCTGAGCCTGAATAATCTTGCCGGTTCCCAGACAACAACTGTGGACTTGAACGAGGCACCCTTCCAGATTAAGGAAGAACATCTTGCCAGACTAAGAGCACTGTACCGATCTACGGAAATTGGGAAACGGTTCTTTCCTCGTTGTTCAGAAGTACTGAACAAGATCATGGATGGTGATGAAGTGTCATGGCTTACATACACAGGGAATGACACTCCAGAAATAAGGCTCTCAAAGAGAAAAAGGTACATGGAAATCCAAGAAGTACTAAGTAAGGCTTTTGATGAAGATAAACAGGAAATTGATCGTTCTGGAATGTCATCATCCTCATCTTCTACATCAGCACGAGTAGTAAGGCCTAAGCTCACTATCGATCAACATTCGAAACAAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001666 GO:0002376 GO:0002682 GO:0002831 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009625 GO:0009627 GO:0009628 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010033 GO:0010112 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031348 GO:0032101 GO:0032870 GO:0035690 GO:0036293 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0045893 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048585 GO:0050776 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0080027 GO:0080090 GO:0080134 GO:0098542 GO:1901698 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000022 GO:2000031 GO:2000112 GO:2001023 GO:2001038 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 BTB DUF3420 NPR1_like_C

Protein Analysis

586

Amino Acids

64.98

Weight (kDa)

6.14

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 54 - 172 1.9e-11 BTB/POZ domain
DUF3420 PF11900 216 - 264 1.3e-06 Domain of unknown function (DUF3420)
Ank_2 PF12796 263 - 349 4.2e-08 Ankyrin repeats (3 copies)
Ank_5 PF13857 307 - 353 7.3e-06 Ankyrin repeats (many copies)
NPR1_like_C PF12313 363 - 568 3.3e-82 NPR1/NIM1 like defence protein C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 867
Acc65I GGTACC 1 cut(s) 1290
AccB1I GGYRCC 2 cut(s) 1290, 1423
AccI GTMKAC 1 cut(s) 408
AccII CGCG 1 cut(s) 230
AccIII TCCGGA 1 cut(s) 766
AciI CCGC 7 cut(s) 214, 228, 366, 938, 986, 1106, 1153
AclWI GGATC 6 cut(s) 681, 694, 995, 1008, 1187, 1200
AcoI YGGCCR 1 cut(s) 193
AcuI CTGAAG 2 cut(s) 1061, 1332
AcyI GRCGYC 1 cut(s) 171
AfaI GTAC 8 cut(s) 161, 362, 1262, 1292, 1472, 1521, 1613, 1632
AfiI CCNNNNNNNGG 3 cut(s) 1202, 1438, 1480
AgsI TTSAA 9 cut(s) 247, 293, 298, 480, 488, 539, 838, 1117, 1417
AjnI CCWGG 1 cut(s) 992
AjuI GAANNNNNNNTTGG 2 cut(s) 306, 338
Alw21I GWGCWC 4 cut(s) 239, 424, 1039, 1468
AlwI GGATC 6 cut(s) 681, 694, 995, 1008, 1187, 1200
Aor13HI TCCGGA 1 cut(s) 766
AoxI GGCC 2 cut(s) 193, 1721
ApeKI GCWGC 5 cut(s) 216, 752, 919, 976, 1103
ArsI GACNNNNNNTTYG 2 cut(s) 168, 200
Asp700I GAANNNNTTC 2 cut(s) 254, 1496
Asp718I GGTACC 1 cut(s) 1290
AspLEI GCGC 1 cut(s) 868
AsuC2I CCSGG 1 cut(s) 197
AsuHPI GGTGA 3 cut(s) 59, 84, 1553
AsuII TTCGAA 2 cut(s) 826, 1748
AxyI CCTNAGG 1 cut(s) 959
BaeI ACNNNNGTAYC 2 cut(s) 1244, 1277
BamHI GGATCC 3 cut(s) 686, 1000, 1192
BanI GGYRCC 2 cut(s) 1290, 1423
BanII GRGCYC 1 cut(s) 239
BauI CACGAG 1 cut(s) 1710
BbsI GAAGAC 2 cut(s) 247, 1131
Bbv12I GWGCWC 4 cut(s) 239, 424, 1039, 1468
BbvI GCAGC 5 cut(s) 203, 739, 906, 963, 1090
BccI CCATC 3 cut(s) 1055, 1222, 1532
BceAI ACGGC 1 cut(s) 208
BcgI CGANNNNNNTGC 4 cut(s) 401, 435, 851, 885
BciT130I CCWGG 1 cut(s) 994
BciVI GTATCC 1 cut(s) 780
BcnI CCSGG 1 cut(s) 197
BfuI GTATCC 1 cut(s) 780
BisI GCNGC 8 cut(s) 217, 228, 367, 753, 920, 977, 987, 1104
BlsI GCNGC 8 cut(s) 218, 229, 368, 754, 921, 978, 988, 1105
BmcAI AGTACT 2 cut(s) 1521, 1632
Bme1390I CCNGG 2 cut(s) 197, 994
BmiI GGNNCC 7 cut(s) 688, 956, 1002, 1194, 1292, 1393, 1425
BmrFI CCNGG 2 cut(s) 197, 994
BmsI GCATC 3 cut(s) 228, 853, 889
BpiI GAAGAC 2 cut(s) 247, 1131
BplI GAGNNNNNCTC 2 cut(s) 703, 735
BpmI CTGGAG 1 cut(s) 1566
Bpu10I CCTNAGC 2 cut(s) 1370, 1725
Bpu14I TTCGAA 2 cut(s) 826, 1748
BpuEI CTTGAG 5 cut(s) 101, 359, 666, 686, 1286
BpuMI CCSGG 1 cut(s) 197
Bsa29I ATCGAT 1 cut(s) 1737
BsaHI GRCGYC 1 cut(s) 171
BsaJI CCNNGG 2 cut(s) 1044, 1302
BsaWI WCCGGW 1 cut(s) 766
Bsc4I CCNNNNNNNGG 3 cut(s) 1202, 1438, 1480
Bse118I RCCGGY 1 cut(s) 1388
Bse1I ACTGG 2 cut(s) 504, 1287
Bse21I CCTNAGG 1 cut(s) 959
Bse3DI GCAATG 1 cut(s) 674
BseAI TCCGGA 1 cut(s) 766
BseBI CCWGG 1 cut(s) 994
BseCI ATCGAT 1 cut(s) 1737
BseDI CCNNGG 2 cut(s) 1044, 1302
BseGI GGATG 7 cut(s) 110, 219, 946, 1054, 1066, 1543, 1688
BseLI CCNNNNNNNGG 3 cut(s) 1202, 1438, 1480
BseMI GCAATG 1 cut(s) 674
BseMII CTCAG 4 cut(s) 273, 507, 950, 1361
BseNI ACTGG 2 cut(s) 504, 1287
BseRI GAGGAG 3 cut(s) 87, 145, 247
BseX3I CGGCCG 1 cut(s) 193
BseXI GCAGC 5 cut(s) 203, 739, 906, 963, 1090
BsgI GTGCAG 1 cut(s) 962
Bsh1236I CGCG 1 cut(s) 230
Bsh1285I CGRYCG 1 cut(s) 196
BshFI GGCC 2 cut(s) 195, 1723
BshNI GGYRCC 2 cut(s) 1290, 1423
BshVI ATCGAT 1 cut(s) 1737
BsiEI CGRYCG 1 cut(s) 196
BsiHKAI GWGCWC 4 cut(s) 239, 424, 1039, 1468
BsiSI CCGG 3 cut(s) 196, 767, 1389
BslFI GGGAC 3 cut(s) 188, 423, 1026
BslI CCNNNNNNNGG 3 cut(s) 1202, 1438, 1480
BsmFI GGGAC 3 cut(s) 188, 423, 1026
BsmI GAATGC 1 cut(s) 834
BsnI GGCC 2 cut(s) 195, 1723
Bsp119I TTCGAA 2 cut(s) 826, 1748
Bsp1286I GDGCHC 4 cut(s) 239, 424, 1039, 1468
Bsp13I TCCGGA 1 cut(s) 766
Bsp1407I TGTACA 1 cut(s) 360
Bsp19I CCATGG 1 cut(s) 1302
BspACI CCGC 7 cut(s) 214, 228, 366, 938, 986, 1106, 1153
BspANI GGCC 2 cut(s) 195, 1723
BspCNI CTCAG 4 cut(s) 272, 506, 951, 1362
BspDI ATCGAT 1 cut(s) 1737
BspEI TCCGGA 1 cut(s) 766
BspFNI CGCG 1 cut(s) 230
BspLI GGNNCC 7 cut(s) 688, 956, 1002, 1194, 1292, 1393, 1425
BspPI GGATC 6 cut(s) 681, 694, 995, 1008, 1187, 1200
BspQI GCTCTTC 1 cut(s) 1080
BspT104I TTCGAA 2 cut(s) 826, 1748
BspT107I GGYRCC 2 cut(s) 1290, 1423
BsrDI GCAATG 1 cut(s) 674
BsrFI RCCGGY 1 cut(s) 1388
BsrGI TGTACA 1 cut(s) 360
BsrI ACTGG 2 cut(s) 504, 1287
BssAI RCCGGY 1 cut(s) 1388
BssECI CCNNGG 2 cut(s) 1044, 1302
BssNI GRCGYC 1 cut(s) 171
BssSI CACGAG 1 cut(s) 1710
BssT1I CCWWGG 1 cut(s) 1302
Bst2BI CACGAG 1 cut(s) 1710
Bst2UI CCWGG 1 cut(s) 994
Bst4CI ACNGT 7 cut(s) 339, 734, 896, 973, 1408, 1470, 1497
Bst6I CTCTTC 2 cut(s) 88, 1080
BstACI GRCGYC 1 cut(s) 171
BstAUI TGTACA 1 cut(s) 360
BstBI TTCGAA 2 cut(s) 826, 1748
BstC8I GCNNGC 6 cut(s) 371, 870, 1179, 1224, 1234, 1366
BstDEI CTNAG 9 cut(s) 259, 493, 959, 1005, 1086, 1370, 1460, 1634, 1725
BstDSI CCRYGG 1 cut(s) 1302
BstF5I GGATG 7 cut(s) 110, 219, 946, 1054, 1066, 1543, 1688
BstFNI CGCG 1 cut(s) 230
BstHHI GCGC 1 cut(s) 868
BstMCI CGRYCG 1 cut(s) 196
BstMWI GCNNNNNNNGC 1 cut(s) 428
BstNI CCWGG 1 cut(s) 994
BstNSI RCATGY 1 cut(s) 872
BstSCI CCNGG 2 cut(s) 195, 992
BstUI CGCG 1 cut(s) 230
BstV1I GCAGC 5 cut(s) 203, 739, 906, 963, 1090
BstV2I GAAGAC 2 cut(s) 247, 1131
BstX2I RGATCY 3 cut(s) 686, 1000, 1192
BstYI RGATCY 3 cut(s) 686, 1000, 1192
BstZI CGGCCG 1 cut(s) 193
Bsu15I ATCGAT 1 cut(s) 1737
Bsu36I CCTNAGG 1 cut(s) 959
BsuI GTATCC 1 cut(s) 780
BsuRI GGCC 2 cut(s) 195, 1723
BsuTUI ATCGAT 1 cut(s) 1737
BtgI CCRYGG 1 cut(s) 1302
BtgZI GCGATG 2 cut(s) 1241, 1251
BtsCI GGATG 7 cut(s) 110, 219, 946, 1054, 1066, 1543, 1688
BtsIMutI CAGTG 3 cut(s) 335, 969, 1466
Cac8I GCNNGC 6 cut(s) 371, 870, 1179, 1224, 1234, 1366
CfoI GCGC 1 cut(s) 868
Cfr10I RCCGGY 1 cut(s) 1388
ClaI ATCGAT 1 cut(s) 1737
CseI GACGC 2 cut(s) 179, 1079
Csp6I GTAC 8 cut(s) 160, 361, 1261, 1291, 1471, 1520, 1612, 1631
CspCI CAANNNNNGTGG 2 cut(s) 1389, 1424
CviAII CATG 8 cut(s) 425, 454, 869, 1303, 1534, 1554, 1615, 1758
CviQI GTAC 8 cut(s) 160, 361, 1261, 1291, 1471, 1520, 1612, 1631
DdeI CTNAG 9 cut(s) 259, 493, 959, 1005, 1086, 1370, 1460, 1634, 1725
EaeI YGGCCR 1 cut(s) 193
EagI CGGCCG 1 cut(s) 193
Eam1104I CTCTTC 2 cut(s) 88, 1080
EarI CTCTTC 2 cut(s) 88, 1080
Ecl136II GAGCTC 1 cut(s) 237
EclXI CGGCCG 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 1302
Eco147I AGGCCT 1 cut(s) 1723
Eco24I GRGCYC 1 cut(s) 239
Eco32I GATATC 1 cut(s) 106
Eco52I CGGCCG 1 cut(s) 193
Eco53kI GAGCTC 1 cut(s) 237
Eco57I CTGAAG 2 cut(s) 1061, 1332
Eco81I CCTNAGG 1 cut(s) 959
EcoICRI GAGCTC 1 cut(s) 237
EcoRII CCWGG 1 cut(s) 992
EcoRV GATATC 1 cut(s) 106
EcoT14I CCWWGG 1 cut(s) 1302
EcoT38I GRGCYC 1 cut(s) 239
ErhI CCWWGG 1 cut(s) 1302
FaeI CATG 8 cut(s) 428, 457, 872, 1306, 1537, 1557, 1618, 1761
FalI AAGNNNNNCTT 8 cut(s) 239, 271, 1200, 1232, 1434, 1466, 1627, 1659
FaqI GGGAC 3 cut(s) 188, 423, 1026
FatI CATG 8 cut(s) 424, 453, 868, 1302, 1533, 1553, 1614, 1757
FblI GTMKAC 1 cut(s) 408
Fnu4HI GCNGC 8 cut(s) 217, 228, 367, 753, 920, 977, 987, 1104
FokI GGATG 7 cut(s) 97, 206, 953, 1061, 1073, 1550, 1675
FriOI GRGCYC 1 cut(s) 239
Fsp4HI GCNGC 8 cut(s) 217, 228, 367, 753, 920, 977, 987, 1104
FspAI RTGCGCAY 1 cut(s) 867
FspI TGCGCA 1 cut(s) 867
GlaI GCGC 1 cut(s) 867
GluI GCNGC 8 cut(s) 217, 228, 367, 753, 920, 977, 987, 1104
GsuI CTGGAG 1 cut(s) 1566
HaeIII GGCC 2 cut(s) 195, 1723
HapII CCGG 3 cut(s) 196, 767, 1389
HgaI GACGC 2 cut(s) 179, 1079
HhaI GCGC 1 cut(s) 868
Hin1I GRCGYC 1 cut(s) 171
Hin1II CATG 8 cut(s) 428, 457, 872, 1306, 1537, 1557, 1618, 1761
Hin6I GCGC 1 cut(s) 866
HinP1I GCGC 1 cut(s) 866
HincII GTYRAC 1 cut(s) 151
HindII GTYRAC 1 cut(s) 151
HindIII AAGCTT 2 cut(s) 597, 1209
HinfI GANTC 8 cut(s) 29, 152, 332, 413, 699, 707, 803, 853
HpaII CCGG 3 cut(s) 196, 767, 1389
HphI GGTGA 3 cut(s) 59, 84, 1553
Hpy166II GTNNAC 4 cut(s) 151, 211, 409, 1411
Hpy188I TCNGA 9 cut(s) 28, 130, 496, 646, 741, 808, 1048, 1080, 1516
Hpy8I GTNNAC 4 cut(s) 151, 211, 409, 1411
Hpy99I CGWCG 4 cut(s) 173, 188, 323, 446
HpyAV CCTTC 5 cut(s) 263, 304, 991, 1178, 1438
HpyCH4III ACNGT 7 cut(s) 339, 734, 896, 973, 1408, 1470, 1497
HpyCH4IV ACGT 2 cut(s) 252, 321
HpyCH4V TGCA 5 cut(s) 219, 872, 902, 951, 979
HpyF10VI GCNNNNNNNGC 1 cut(s) 428
HpyF3I CTNAG 9 cut(s) 259, 493, 959, 1005, 1086, 1370, 1460, 1634, 1725
HpySE526I ACGT 2 cut(s) 252, 321
Hsp92I GRCGYC 1 cut(s) 171
Hsp92II CATG 8 cut(s) 428, 457, 872, 1306, 1537, 1557, 1618, 1761
HspAI GCGC 1 cut(s) 866
Kpn2I TCCGGA 1 cut(s) 766
KpnI GGTACC 1 cut(s) 1294
LguI GCTCTTC 1 cut(s) 1080
LmnI GCTCC 3 cut(s) 234, 741, 1174
Lsp1109I GCAGC 5 cut(s) 203, 739, 906, 963, 1090
LweI GCATC 3 cut(s) 228, 853, 889
MaeII ACGT 2 cut(s) 252, 321
MaeIII GTNAC 7 cut(s) 353, 502, 658, 758, 965, 1017, 1051
MflI RGATCY 3 cut(s) 686, 1000, 1192
MhlI GDGCHC 4 cut(s) 239, 424, 1039, 1468
MluCI AATT 4 cut(s) 293, 946, 1485, 1665
MlyI GAGTC 3 cut(s) 146, 326, 407
MmeI TCCRAC 3 cut(s) 57, 304, 1258
MroI TCCGGA 1 cut(s) 766
MroXI GAANNNNTTC 2 cut(s) 254, 1496
MseI TTAA 1 cut(s) 1437
MspA1I CMGCKG 2 cut(s) 216, 366
MspI CCGG 3 cut(s) 196, 767, 1389
MspR9I CCNGG 2 cut(s) 197, 994
Mva1269I GAATGC 1 cut(s) 834
MvaI CCWGG 1 cut(s) 994
MvnI CGCG 1 cut(s) 230
MwoI GCNNNNNNNGC 1 cut(s) 428
NciI CCSGG 1 cut(s) 197
NcoI CCATGG 1 cut(s) 1302
NlaIII CATG 8 cut(s) 428, 457, 872, 1306, 1537, 1557, 1618, 1761
NlaIV GGNNCC 7 cut(s) 688, 956, 1002, 1194, 1292, 1393, 1425
NmuCI GTSAC 3 cut(s) 502, 658, 1017
NsbI TGCGCA 1 cut(s) 867
NspI RCATGY 1 cut(s) 872
NspV TTCGAA 2 cut(s) 826, 1748
PaeI GCATGC 1 cut(s) 872
PceI AGGCCT 1 cut(s) 1723
PciSI GCTCTTC 1 cut(s) 1080
PctI GAATGC 1 cut(s) 834
PdmI GAANNNNTTC 2 cut(s) 254, 1496
PfeI GAWTC 5 cut(s) 29, 699, 707, 803, 853
PkrI GCNGC 8 cut(s) 218, 229, 368, 754, 921, 978, 988, 1105
PleI GAGTC 3 cut(s) 146, 326, 407
PpsI GAGTC 3 cut(s) 146, 326, 407
Psp124BI GAGCTC 1 cut(s) 239
Psp6I CCWGG 1 cut(s) 992
PspGI CCWGG 1 cut(s) 992
PspN4I GGNNCC 7 cut(s) 688, 956, 1002, 1194, 1292, 1393, 1425
PsuI RGATCY 3 cut(s) 686, 1000, 1192
RsaI GTAC 8 cut(s) 161, 362, 1262, 1292, 1472, 1521, 1613, 1632
RsaNI GTAC 8 cut(s) 160, 361, 1261, 1291, 1471, 1520, 1612, 1631
SacI GAGCTC 1 cut(s) 239
SapI GCTCTTC 1 cut(s) 1080
SaqAI TTAA 1 cut(s) 1437
SatI GCNGC 8 cut(s) 217, 228, 367, 753, 920, 977, 987, 1104
ScaI AGTACT 2 cut(s) 1521, 1632
SchI GAGTC 3 cut(s) 146, 326, 407
ScrFI CCNGG 2 cut(s) 197, 994
SduI GDGCHC 4 cut(s) 239, 424, 1039, 1468
SfaNI GCATC 3 cut(s) 228, 853, 889
SfuI TTCGAA 2 cut(s) 826, 1748
SmlI CTYRAG 5 cut(s) 116, 374, 665, 681, 1265
SmoI CTYRAG 5 cut(s) 116, 374, 665, 681, 1265
SphI GCATGC 1 cut(s) 872
Sse9I AATT 4 cut(s) 293, 946, 1485, 1665
SseBI AGGCCT 1 cut(s) 1723
SsiI CCGC 7 cut(s) 214, 228, 366, 938, 986, 1106, 1153
SstI GAGCTC 1 cut(s) 239
StuI AGGCCT 1 cut(s) 1723
StyD4I CCNGG 2 cut(s) 195, 992
StyI CCWWGG 1 cut(s) 1302
TaaI ACNGT 7 cut(s) 339, 734, 896, 973, 1408, 1470, 1497
TaiI ACGT 2 cut(s) 255, 324
TaqI TCGA 6 cut(s) 138, 710, 826, 1121, 1737, 1748
TasI AATT 4 cut(s) 293, 946, 1485, 1665
TatI WGTACW 3 cut(s) 360, 1519, 1630
TauI GCSGC 3 cut(s) 230, 369, 989
TfiI GAWTC 5 cut(s) 29, 699, 707, 803, 853
Tru1I TTAA 1 cut(s) 1437
Tru9I TTAA 1 cut(s) 1437
TscAI CASTG 3 cut(s) 342, 976, 1473
TseFI GTSAC 3 cut(s) 502, 658, 1017
TseI GCWGC 5 cut(s) 216, 752, 919, 976, 1103
Tsp45I GTSAC 3 cut(s) 502, 658, 1017
TspDTI ATGAA 5 cut(s) 442, 1265, 1356, 1560, 1665
TspGWI ACGGA 2 cut(s) 679, 1496
TspRI CASTG 3 cut(s) 342, 976, 1473
XceI RCATGY 1 cut(s) 872
XmiI GTMKAC 1 cut(s) 408
XmnI GAANNNNTTC 2 cut(s) 254, 1496
ZrmI AGTACT 2 cut(s) 1521, 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.