Yip1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g04230 FvH4_3g04240 |
| rosa_chinensis | RchiOBHm_Chr1g0326901 RchiOBHm_Chr2g0167531 RchiOBHm_Chr5g0045341 |
| rosa_laevigata | RLG00000031505 RLG00000034532 |
| rosa_multiflora | Rmu_sc0000338.1_g000031 Rmu_sc0001972.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00069380 |
| rosa_rugosa | Rorug04G0033000 Rorug04G0033100 Rorug04G0033200 Rorug04G0423300 |
| rosa_samantha | Rh2AG204700 Rh5AG050700 Rh5BG049800 Rh5DG322400 |
| rosa_wichuraiana | Rw5G005050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 152 |
| AciI | CCGC | 6 cut(s) | 129, 150, 237, 250, 271, 274 |
| Alw26I | GTCTC | 1 cut(s) | 171 |
| AoxI | GGCC | 1 cut(s) | 205 |
| ApeKI | GCWGC | 1 cut(s) | 233 |
| AspS9I | GGNCC | 1 cut(s) | 206 |
| BanII | GRGCYC | 1 cut(s) | 113 |
| BbvI | GCAGC | 1 cut(s) | 245 |
| BccI | CCATC | 1 cut(s) | 166 |
| BceAI | ACGGC | 1 cut(s) | 224 |
| BcoDI | GTCTC | 1 cut(s) | 171 |
| BisI | GCNGC | 3 cut(s) | 234, 237, 274 |
| BlsI | GCNGC | 3 cut(s) | 235, 238, 275 |
| BmgT120I | GGNCC | 1 cut(s) | 206 |
| BmiI | GGNNCC | 1 cut(s) | 208 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 29, 38, 68, 139, 169 |
| Bse118I | RCCGGY | 1 cut(s) | 203 |
| BseGI | GGATG | 3 cut(s) | 158, 182, 219 |
| BseRI | GAGGAG | 5 cut(s) | 144, 159, 162, 206, 247 |
| BseXI | GCAGC | 1 cut(s) | 245 |
| BseYI | CCCAGC | 1 cut(s) | 140 |
| BshFI | GGCC | 1 cut(s) | 207 |
| BsiSI | CCGG | 1 cut(s) | 204 |
| BslFI | GGGAC | 2 cut(s) | 231, 249 |
| BsmAI | GTCTC | 1 cut(s) | 171 |
| BsmBI | CGTCTC | 1 cut(s) | 171 |
| BsmFI | GGGAC | 2 cut(s) | 231, 249 |
| BsnI | GGCC | 1 cut(s) | 207 |
| Bsp1286I | GDGCHC | 1 cut(s) | 113 |
| Bsp143I | GATC | 1 cut(s) | 75 |
| BspACI | CCGC | 6 cut(s) | 129, 150, 237, 250, 271, 274 |
| BspANI | GGCC | 1 cut(s) | 207 |
| BspLI | GGNNCC | 1 cut(s) | 208 |
| BsrBI | CCGCTC | 1 cut(s) | 152 |
| BsrFI | RCCGGY | 1 cut(s) | 203 |
| BssAI | RCCGGY | 1 cut(s) | 203 |
| BssMI | GATC | 1 cut(s) | 75 |
| Bst4CI | ACNGT | 2 cut(s) | 37, 121 |
| BstC8I | GCNNGC | 1 cut(s) | 97 |
| BstF5I | GGATG | 3 cut(s) | 158, 182, 219 |
| BstKTI | GATC | 1 cut(s) | 78 |
| BstMAI | GTCTC | 1 cut(s) | 171 |
| BstMBI | GATC | 1 cut(s) | 75 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 233 |
| BstV1I | GCAGC | 1 cut(s) | 245 |
| BsuRI | GGCC | 1 cut(s) | 207 |
| BtsCI | GGATG | 3 cut(s) | 158, 182, 219 |
| Cac8I | GCNNGC | 1 cut(s) | 97 |
| Cfr10I | RCCGGY | 1 cut(s) | 203 |
| Cfr13I | GGNCC | 1 cut(s) | 206 |
| CseI | GACGC | 1 cut(s) | 88 |
| CviJI | RGCY | 6 cut(s) | 111, 136, 144, 207, 227, 236 |
| CviKI_1 | RGCY | 6 cut(s) | 111, 136, 144, 207, 227, 236 |
| DpnI | GATC | 1 cut(s) | 77 |
| DpnII | GATC | 1 cut(s) | 75 |
| EciI | GGCGGA | 1 cut(s) | 260 |
| Eco24I | GRGCYC | 1 cut(s) | 113 |
| EcoT38I | GRGCYC | 1 cut(s) | 113 |
| Esp3I | CGTCTC | 1 cut(s) | 171 |
| FaqI | GGGAC | 2 cut(s) | 231, 249 |
| FauI | CCCGC | 2 cut(s) | 136, 257 |
| Fnu4HI | GCNGC | 3 cut(s) | 234, 237, 274 |
| FokI | GGATG | 3 cut(s) | 145, 169, 206 |
| FriOI | GRGCYC | 1 cut(s) | 113 |
| Fsp4HI | GCNGC | 3 cut(s) | 234, 237, 274 |
| GluI | GCNGC | 3 cut(s) | 234, 237, 274 |
| GsaI | CCCAGC | 1 cut(s) | 144 |
| HaeIII | GGCC | 1 cut(s) | 207 |
| HapII | CCGG | 1 cut(s) | 204 |
| HgaI | GACGC | 1 cut(s) | 88 |
| HpaII | CCGG | 1 cut(s) | 204 |
| Hpy188I | TCNGA | 1 cut(s) | 64 |
| HpyAV | CCTTC | 2 cut(s) | 60, 189 |
| HpyCH4III | ACNGT | 2 cut(s) | 37, 121 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 233 |
| Kzo9I | GATC | 1 cut(s) | 75 |
| LmnI | GCTCC | 1 cut(s) | 157 |
| LpnPI | CCDG | 4 cut(s) | 86, 109, 154, 217 |
| Lsp1109I | GCAGC | 1 cut(s) | 245 |
| MaeIII | GTNAC | 1 cut(s) | 3 |
| MalI | GATC | 1 cut(s) | 77 |
| MbiI | CCGCTC | 1 cut(s) | 152 |
| MboI | GATC | 1 cut(s) | 75 |
| MhlI | GDGCHC | 1 cut(s) | 113 |
| MmeI | TCCRAC | 1 cut(s) | 87 |
| MspI | CCGG | 1 cut(s) | 204 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 233 |
| NdeII | GATC | 1 cut(s) | 75 |
| NlaIV | GGNNCC | 1 cut(s) | 208 |
| NmuCI | GTSAC | 1 cut(s) | 3 |
| PkrI | GCNGC | 3 cut(s) | 235, 238, 275 |
| PspFI | CCCAGC | 1 cut(s) | 140 |
| PspN4I | GGNNCC | 1 cut(s) | 208 |
| PspPI | GGNCC | 1 cut(s) | 206 |
| SatI | GCNGC | 3 cut(s) | 234, 237, 274 |
| Sau3AI | GATC | 1 cut(s) | 75 |
| Sau96I | GGNCC | 1 cut(s) | 206 |
| SduI | GDGCHC | 1 cut(s) | 113 |
| SetI | ASST | 1 cut(s) | 197 |
| SsiI | CCGC | 6 cut(s) | 129, 150, 237, 250, 271, 274 |
| TaaI | ACNGT | 2 cut(s) | 37, 121 |
| TaqI | TCGA | 1 cut(s) | 107 |
| TauI | GCSGC | 2 cut(s) | 239, 276 |
| TseFI | GTSAC | 1 cut(s) | 3 |
| TseI | GCWGC | 1 cut(s) | 233 |
| Tsp45I | GTSAC | 1 cut(s) | 3 |
| TspDTI | ATGAA | 1 cut(s) | 171 |