Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005674

Physical Location & Seq

Genomic Coordinates Forward (+)

34801809 .. 34803523

Gene Structure 1715 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGCAGCCATATCCAATGGCCAGGTCCTCGCTGGCCCCAGCAATCCAATGGTCACTCCTCTCCTCACCGATCTCTACCAGTTCACCATGGCCTACAATCCATTTGGCGGCGAATACACAGTGTTTGCTGGATTAGAGGAATGCATCAAATTCATTGCTAATTTCAAATTGGCCGACGACGAAATCAATTTCATCCGCCAATCCTTGTCTTCTTCATGTGAGCTAGAGGAAGGATTCTATAAGTATCTAAGTGGAGTTGACTGTTCTAAAGTTGAAGTCTATGTTATCCAAGAAGGATCAGTCGTTTTTCCAAAGGTTCCTCTCGTTAGAGTTAAAGGACCAATCGTTGTGGTTCAGTTACTCGAAACTCCATTCTTGAATCTCATTAATTATGCGTCATTAGTTGCTACAAATGCCGCAAGGCATCGTTTCGTTGCTGGAGAATCTAAAATGCTACTTGAGTTTGTGCTTCGACGAGCTCAGGGACCTGATGGTGGAATAGGGGCATCTAGGTACTGCTACATGGGAGGATTTCATGCAACAAGTAATGTTGCCGTTGGAAAGATATTTGGGATCCCTCTTCGTGGAACACATTCGCATGCTTTTGTTAGCTCATTCATGAGCCCAGACGAGATTATAAATAAATCACTTCATCATAGCAGTGATAAGCGCAGTAGTACTTGTGAGGATTTTGTTAGCCTGGTTCAGACTTGGTTGAGCAAAATTCAGTGGTCAAATTCATTAAATGGTACTTTTGGTGAGACCAATCATAGTGAGCTTGCAGCATTCACATCGTATGCCCTGGCATTCCATGATAACTTTCTAGCTCTTGTGACATATGATGTTATGAGGAGTGGAATTCCCAACTTTTGTGCAGTTGCTTTAGCACTCAGTGATCTAGGGTACAAAGCAGCTAGCATTAGGTTGGATTCAGGTGATCTAGCATATCTCTCCTATGAGGCTCGGAAGATCTTTCTCATCATTGAGAAAGAATTGGAGTACCTGGATTTGGAAAGACGGTTATCACAGCTAGGCCATGAGGTTGATGCATTTGGAATTGGGACCCATGTAGTTACTTTTTATGCTCAACCTGCTCTGGGTTGTGTTTTCAAGCTTGTTGAGATAAATAATCATCCTCGCATCAAACTTTCTGAAGATGTCACAAAGGTCTCCATCCCTTGTAAAAAACGATCTTACAGATTGTTTGGGAAAGAAGGTTATCCTCTGGTAGACATAATGACCGGAGAAAATGAACCACCTCCAAAGGTTGGAGAACGGATCCTGTGTCGTCACCCCTTTAATGAATCGAAGAGAGCATATGTAGTGCAGCAGCGTGTTGAGGAACTTATGAAATGCTTTTGGCATGGCCCAGGTAGAGTGAGAGATGATCTGCCACCATTAAAGGACATCAGGGACCGCTGCATCAGCCAACTCAGGAAAATGCGTCCCGACCACATGAGGAGACTAAACCCCACTCCGTATCAGGTTAGTGTAAGTACAAAACTGTATGACTTCATTCACTTTCTATGGCTCAATGAGGCACCCACTATGCCAAAAAATGCTTCATACCATACCCCTCAGACGACAGAAGACGTTTTTTCTGTTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006979 GO:0008150 GO:0016874 GO:0016879 GO:0044424 GO:0044444 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NAPRTase

Protein Analysis

536

Amino Acids

60.21

Weight (kDa)

6.97

Isoelectric Point (pI)

35.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAPRTase_N	PF17767	26 - 130	1.1e-23	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
NAPRTase_C	PF17956	395 - 505	2.8e-31	Nicotinate phosphoribosyltransferase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005674)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23420 AT2G23420 AT4G36940
fragaria_vesca	FvH4_1g16212 FvH4_1g16212 FvH4_1g16212
malus_domestica	MD02G1174500.v1.1 MD15G1285500.v1.1
prunus_persica	Prupe.7G131500_v2.0.a1 Prupe.7G131500_v2.0.a1
pyrus_communis	pycom02g14080 pycom15g24850
rosa_chinensis	RchiOBHm_Chr1g0342971 RchiOBHm_Chr2g0105921 RchiOBHm_Chr7g0236011
rosa_laevigata	RLG00000017470
rosa_multiflora	Rmu_sc0004367.1_g000012 Rmu_sc0008183.1_g000025 Rmu_sc0011173.1_g000015
rosa_roxburghii	Rroxscaffold_2G00137570 Rroxscaffold_2G00137720
rosa_rugosa	Rorug02G0132000
rosa_samantha	Rh2BG192500 Rh2DG189000 Rh7BG420500 Rh7CG469100
rosa_wichuraiana	Rw2G014320 Rw7G037310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	638
Acc36I	ACCTGC	1 cut(s)	1099
AccB1I	GGYRCC	1 cut(s)	1540
AccB7I	CCANNNNNTGG	1 cut(s)	1268
AccI	GTMKAC	1 cut(s)	1230
AciI	CCGC	4 cut(s)	108, 196, 417, 1417
AclWI	GGATC	5 cut(s)	304, 568, 581, 1273, 1286
AcoI	YGGCCR	2 cut(s)	19, 171
AcsI	RAATTY	4 cut(s)	149, 723, 736, 858
AcuI	CTGAAG	1 cut(s)	1173
AdeI	CACNNNGTG	1 cut(s)	893
AfaI	GTAC	6 cut(s)	515, 679, 751, 905, 1001, 1498
AfiI	CCNNNNNNNGG	6 cut(s)	107, 494, 584, 1009, 1097, 1268
AgsI	TTSAA	4 cut(s)	166, 275, 379, 1111
AjnI	CCWGG	5 cut(s)	21, 699, 801, 1002, 1369
AjuI	GAANNNNNNNTTGG	2 cut(s)	1546, 1578
AluBI	AGCT	8 cut(s)	223, 479, 612, 778, 827, 914, 1030, 1114
AluI	AGCT	8 cut(s)	223, 479, 612, 778, 827, 914, 1030, 1114
Alw21I	GWGCWC	1 cut(s)	481
Alw26I	GTCTC	3 cut(s)	755, 1174, 1456
AlwI	GGATC	5 cut(s)	304, 568, 581, 1273, 1286
AoxI	GGCC	6 cut(s)	19, 34, 90, 171, 1033, 1366
ApeKI	GCWGC	6 cut(s)	5, 782, 911, 1327, 1330, 1419
ApoI	RAATTY	4 cut(s)	149, 723, 736, 858
AseI	ATTAAT	1 cut(s)	387
Asp700I	GAANNNNTTC	1 cut(s)	592
AspLEI	GCGC	1 cut(s)	672
AspS9I	GGNCC	7 cut(s)	25, 35, 338, 485, 1062, 1367, 1414
AsuHPI	GGTGA	5 cut(s)	58, 76, 770, 947, 1283
AsuNHI	GCTAGC	1 cut(s)	914
AvaII	GGWCC	5 cut(s)	25, 338, 485, 1062, 1414
BalI	TGGCCA	1 cut(s)	21
BamHI	GGATCC	2 cut(s)	573, 1278
BanI	GGYRCC	1 cut(s)	1540
BanII	GRGCYC	2 cut(s)	481, 626
BbsI	GAAGAC	2 cut(s)	201, 1596
Bbv12I	GWGCWC	1 cut(s)	481
BbvI	GCAGC	6 cut(s)	17, 794, 923, 1339, 1342, 1406
BccI	CCATC	2 cut(s)	485, 1181
BceAI	ACGGC	1 cut(s)	539
BcgI	CGANNNNNNTGC	2 cut(s)	774, 808
BciT130I	CCWGG	5 cut(s)	23, 701, 803, 1004, 1371
BcoDI	GTCTC	3 cut(s)	755, 1174, 1456
BfaI	CTAG	7 cut(s)	224, 510, 824, 899, 915, 941, 1031
BfuAI	ACCTGC	1 cut(s)	1099
BglII	AGATCT	1 cut(s)	969
BisI	GCNGC	8 cut(s)	6, 109, 417, 783, 912, 1328, 1331, 1420
BlsI	GCNGC	8 cut(s)	7, 110, 418, 784, 913, 1329, 1332, 1421
BmcAI	AGTACT	1 cut(s)	679
Bme1390I	CCNGG	5 cut(s)	23, 701, 803, 1004, 1371
Bme18I	GGWCC	5 cut(s)	25, 338, 485, 1062, 1414
BmgT120I	GGNCC	7 cut(s)	25, 35, 338, 485, 1062, 1367, 1414
BmiI	GGNNCC	9 cut(s)	37, 318, 486, 575, 1063, 1064, 1280, 1415, 1542
BmrFI	CCNGG	5 cut(s)	23, 701, 803, 1004, 1371
BmsI	GCATC	6 cut(s)	153, 433, 515, 1036, 1149, 1431
BmtI	GCTAGC	1 cut(s)	918
BpiI	GAAGAC	2 cut(s)	201, 1596
BpmI	CTGGAG	1 cut(s)	459
Bpu10I	CCTNAGC	1 cut(s)	480
BpuEI	CTTGAG	1 cut(s)	479
BsaI	GGTCTC	2 cut(s)	755, 1174
BsaJI	CCNNGG	3 cut(s)	87, 801, 1369
BsaWI	WCCGGW	1 cut(s)	1241
Bsc4I	CCNNNNNNNGG	6 cut(s)	107, 494, 584, 1009, 1097, 1268
Bse1I	ACTGG	1 cut(s)	79
Bse3DI	GCAATG	1 cut(s)	153
BseBI	CCWGG	5 cut(s)	23, 701, 803, 1004, 1371
BseDI	CCNNGG	3 cut(s)	87, 801, 1369
BseGI	GGATG	3 cut(s)	192, 1132, 1173
BseLI	CCNNNNNNNGG	6 cut(s)	107, 494, 584, 1009, 1097, 1268
BseMI	GCAATG	1 cut(s)	153
BseMII	CTCAG	4 cut(s)	494, 904, 1447, 1592
BseNI	ACTGG	1 cut(s)	79
BseRI	GAGGAG	4 cut(s)	48, 53, 865, 1474
BseXI	GCAGC	6 cut(s)	17, 794, 923, 1339, 1342, 1406
BseYI	CCCAGC	1 cut(s)	38
BsgI	GTGCAG	2 cut(s)	894, 1346
BshFI	GGCC	6 cut(s)	21, 36, 92, 173, 1035, 1368
BshNI	GGYRCC	1 cut(s)	1540
BsiHKAI	GWGCWC	1 cut(s)	481
BsiSI	CCGG	1 cut(s)	1242
BslFI	GGGAC	4 cut(s)	498, 1075, 1427, 1431
BslI	CCNNNNNNNGG	6 cut(s)	107, 494, 584, 1009, 1097, 1268
BsmAI	GTCTC	3 cut(s)	755, 1174, 1456
BsmFI	GGGAC	4 cut(s)	498, 1075, 1427, 1431
BsmI	GAATGC	3 cut(s)	146, 785, 806
BsnI	GGCC	6 cut(s)	21, 36, 92, 173, 1035, 1368
Bso31I	GGTCTC	2 cut(s)	755, 1174
Bsp1286I	GDGCHC	2 cut(s)	481, 626
Bsp143I	GATC	9 cut(s)	70, 296, 573, 895, 937, 969, 1190, 1278, 1387
Bsp19I	CCATGG	1 cut(s)	87
BspACI	CCGC	4 cut(s)	108, 196, 417, 1417
BspANI	GGCC	6 cut(s)	21, 36, 92, 173, 1035, 1368
BspCNI	CTCAG	4 cut(s)	493, 903, 1446, 1591
BspHI	TCATGA	1 cut(s)	618
BspLI	GGNNCC	9 cut(s)	37, 318, 486, 575, 1063, 1064, 1280, 1415, 1542
BspMI	ACCTGC	1 cut(s)	1099
BspOI	GCTAGC	1 cut(s)	918
BspPI	GGATC	5 cut(s)	304, 568, 581, 1273, 1286
BspT107I	GGYRCC	1 cut(s)	1540
BspTNI	GGTCTC	2 cut(s)	755, 1174
BsrDI	GCAATG	1 cut(s)	153
BsrI	ACTGG	1 cut(s)	79
BssECI	CCNNGG	3 cut(s)	87, 801, 1369
BssMI	GATC	9 cut(s)	70, 296, 573, 895, 937, 969, 1190, 1278, 1387
BssT1I	CCWWGG	1 cut(s)	87
Bst2UI	CCWGG	5 cut(s)	23, 701, 803, 1004, 1371
Bst4CI	ACNGT	4 cut(s)	121, 263, 1020, 1506
Bst6I	CTCTTC	2 cut(s)	585, 1304
BstC8I	GCNNGC	4 cut(s)	34, 600, 780, 916
BstDEI	CTNAG	5 cut(s)	248, 480, 890, 1433, 1578
BstDSI	CCRYGG	1 cut(s)	87
BstF5I	GGATG	3 cut(s)	192, 1132, 1173
BstHHI	GCGC	1 cut(s)	672
BstKTI	GATC	9 cut(s)	73, 299, 576, 898, 940, 972, 1193, 1281, 1390
BstMAI	GTCTC	3 cut(s)	755, 1174, 1456
BstMBI	GATC	9 cut(s)	70, 296, 573, 895, 937, 969, 1190, 1278, 1387
BstMWI	GCNNNNNNNGC	3 cut(s)	413, 1091, 1425
BstNI	CCWGG	5 cut(s)	23, 701, 803, 1004, 1371
BstNSI	RCATGY	1 cut(s)	602
BstSCI	CCNGG	5 cut(s)	21, 699, 801, 1002, 1369
BstV1I	GCAGC	6 cut(s)	17, 794, 923, 1339, 1342, 1406
BstV2I	GAAGAC	2 cut(s)	201, 1596
BstX2I	RGATCY	3 cut(s)	573, 969, 1278
BstYI	RGATCY	3 cut(s)	573, 969, 1278
BsuRI	GGCC	6 cut(s)	21, 36, 92, 173, 1035, 1368
BtgI	CCRYGG	1 cut(s)	87
BtsCI	GGATG	3 cut(s)	192, 1132, 1173
BtsI	GCAGTG	1 cut(s)	667
BtsIMutI	CAGTG	4 cut(s)	126, 667, 734, 898
BveI	ACCTGC	1 cut(s)	1099
Cac8I	GCNNGC	4 cut(s)	34, 600, 780, 916
CciI	TCATGA	1 cut(s)	618
CfoI	GCGC	1 cut(s)	672
Cfr13I	GGNCC	7 cut(s)	25, 35, 338, 485, 1062, 1367, 1414
CseI	GACGC	2 cut(s)	384, 1433
Csp6I	GTAC	6 cut(s)	514, 678, 750, 904, 1000, 1497
CspCI	CAANNNNNGTGG	2 cut(s)	330, 365
CviQI	GTAC	6 cut(s)	514, 678, 750, 904, 1000, 1497
DdeI	CTNAG	5 cut(s)	248, 480, 890, 1433, 1578
DpnI	GATC	9 cut(s)	72, 298, 575, 897, 939, 971, 1192, 1280, 1389
DpnII	GATC	9 cut(s)	70, 296, 573, 895, 937, 969, 1190, 1278, 1387
DraIII	CACNNNGTG	1 cut(s)	893
EaeI	YGGCCR	2 cut(s)	19, 171
Eam1104I	CTCTTC	2 cut(s)	585, 1304
EarI	CTCTTC	2 cut(s)	585, 1304
EciI	GGCGGA	1 cut(s)	185
Ecl136II	GAGCTC	1 cut(s)	479
Eco130I	CCWWGG	1 cut(s)	87
Eco24I	GRGCYC	2 cut(s)	481, 626
Eco31I	GGTCTC	2 cut(s)	755, 1174
Eco47I	GGWCC	5 cut(s)	25, 338, 485, 1062, 1414
Eco53kI	GAGCTC	1 cut(s)	479
Eco57I	CTGAAG	1 cut(s)	1173
EcoICRI	GAGCTC	1 cut(s)	479
EcoO109I	RGGNCCY	3 cut(s)	25, 485, 1062
EcoRI	GAATTC	1 cut(s)	858
EcoRII	CCWGG	5 cut(s)	21, 699, 801, 1002, 1369
EcoT14I	CCWWGG	1 cut(s)	87
EcoT22I	ATGCAT	2 cut(s)	146, 1051
EcoT38I	GRGCYC	2 cut(s)	481, 626
ErhI	CCWWGG	1 cut(s)	87
FaqI	GGGAC	4 cut(s)	498, 1075, 1427, 1431
FauNDI	CATATG	2 cut(s)	838, 1318
FblI	GTMKAC	1 cut(s)	1230
Fnu4HI	GCNGC	8 cut(s)	6, 109, 417, 783, 912, 1328, 1331, 1420
FokI	GGATG	3 cut(s)	179, 1119, 1160
FriOI	GRGCYC	2 cut(s)	481, 626
Fsp4HI	GCNGC	8 cut(s)	6, 109, 417, 783, 912, 1328, 1331, 1420
FspBI	CTAG	7 cut(s)	224, 510, 824, 899, 915, 941, 1031
GlaI	GCGC	1 cut(s)	671
GluI	GCNGC	8 cut(s)	6, 109, 417, 783, 912, 1328, 1331, 1420
GsaI	CCCAGC	1 cut(s)	42
GsuI	CTGGAG	1 cut(s)	459
HaeIII	GGCC	6 cut(s)	21, 36, 92, 173, 1035, 1368
HapII	CCGG	1 cut(s)	1242
HgaI	GACGC	2 cut(s)	384, 1433
HhaI	GCGC	1 cut(s)	672
Hin6I	GCGC	1 cut(s)	670
HinP1I	GCGC	1 cut(s)	670
HincII	GTYRAC	1 cut(s)	259
HindII	GTYRAC	1 cut(s)	259
HindIII	AAGCTT	1 cut(s)	1112
HinfI	GANTC	5 cut(s)	234, 379, 443, 929, 1304
HpaII	CCGG	1 cut(s)	1242
HphI	GGTGA	5 cut(s)	58, 76, 770, 947, 1283
Hpy166II	GTNNAC	3 cut(s)	84, 259, 1231
Hpy188I	TCNGA	5 cut(s)	708, 966, 1153, 1581, 1610
Hpy188III	TCNNGA	4 cut(s)	376, 619, 1435, 1448
Hpy8I	GTNNAC	3 cut(s)	84, 259, 1231
Hpy99I	CGWCG	3 cut(s)	179, 182, 477
HpyAV	CCTTC	3 cut(s)	224, 287, 1208
HpyCH4III	ACNGT	4 cut(s)	121, 263, 1020, 1506
HpyCH4IV	ACGT	1 cut(s)	1593
HpyCH4V	TGCA	7 cut(s)	144, 539, 782, 875, 1049, 1327, 1422
HpyF10VI	GCNNNNNNNGC	3 cut(s)	413, 1091, 1425
HpyF3I	CTNAG	5 cut(s)	248, 480, 890, 1433, 1578
HpySE526I	ACGT	1 cut(s)	1593
HspAI	GCGC	1 cut(s)	670
KflI	GGGWCCC	1 cut(s)	1062
Kzo9I	GATC	9 cut(s)	70, 296, 573, 895, 937, 969, 1190, 1278, 1387
Lsp1109I	GCAGC	6 cut(s)	17, 794, 923, 1339, 1342, 1406
LweI	GCATC	6 cut(s)	153, 433, 515, 1036, 1149, 1431
MaeI	CTAG	7 cut(s)	224, 510, 824, 899, 915, 941, 1031
MaeII	ACGT	1 cut(s)	1593
MaeIII	GTNAC	6 cut(s)	52, 357, 832, 1072, 1159, 1289
MalI	GATC	9 cut(s)	72, 298, 575, 897, 939, 971, 1192, 1280, 1389
MboI	GATC	9 cut(s)	70, 296, 573, 895, 937, 969, 1190, 1278, 1387
MboII	GAAGA	7 cut(s)	201, 204, 572, 979, 1166, 1321, 1601
MflI	RGATCY	3 cut(s)	573, 969, 1278
MhlI	GDGCHC	2 cut(s)	481, 626
MlsI	TGGCCA	1 cut(s)	21
MluNI	TGGCCA	1 cut(s)	21
MmeI	TCCRAC	3 cut(s)	538, 906, 1249
Mox20I	TGGCCA	1 cut(s)	21
Mph1103I	ATGCAT	2 cut(s)	146, 1051
MroXI	GAANNNNTTC	1 cut(s)	592
MscI	TGGCCA	1 cut(s)	21
MseI	TTAA	5 cut(s)	333, 387, 743, 1299, 1400
MslI	CAYNNNNRTG	2 cut(s)	597, 660
Msp20I	TGGCCA	1 cut(s)	21
MspA1I	CMGCKG	1 cut(s)	1419
MspI	CCGG	1 cut(s)	1242
MspR9I	CCNGG	5 cut(s)	23, 701, 803, 1004, 1371
Mva1269I	GAATGC	3 cut(s)	146, 785, 806
MvaI	CCWGG	5 cut(s)	23, 701, 803, 1004, 1371
MwoI	GCNNNNNNNGC	3 cut(s)	413, 1091, 1425
NcoI	CCATGG	1 cut(s)	87
NdeI	CATATG	2 cut(s)	838, 1318
NdeII	GATC	9 cut(s)	70, 296, 573, 895, 937, 969, 1190, 1278, 1387
NheI	GCTAGC	1 cut(s)	914
NlaIV	GGNNCC	9 cut(s)	37, 318, 486, 575, 1063, 1064, 1280, 1415, 1542
NmuCI	GTSAC	4 cut(s)	52, 832, 1159, 1289
NsiI	ATGCAT	2 cut(s)	146, 1051
NspI	RCATGY	1 cut(s)	602
PaeI	GCATGC	1 cut(s)	602
PagI	TCATGA	1 cut(s)	618
PctI	GAATGC	3 cut(s)	146, 785, 806
PdmI	GAANNNNTTC	1 cut(s)	592
PfeI	GAWTC	5 cut(s)	234, 379, 443, 929, 1304
PflMI	CCANNNNNTGG	1 cut(s)	1268
PkrI	GCNGC	8 cut(s)	7, 110, 418, 784, 913, 1329, 1332, 1421
PpuMI	RGGWCCY	3 cut(s)	25, 485, 1062
PshBI	ATTAAT	1 cut(s)	387
PsiI	TTATAA	1 cut(s)	638
Psp124BI	GAGCTC	1 cut(s)	481
Psp5II	RGGWCCY	3 cut(s)	25, 485, 1062
Psp6I	CCWGG	5 cut(s)	21, 699, 801, 1002, 1369
PspFI	CCCAGC	1 cut(s)	38
PspGI	CCWGG	5 cut(s)	21, 699, 801, 1002, 1369
PspN4I	GGNNCC	9 cut(s)	37, 318, 486, 575, 1063, 1064, 1280, 1415, 1542
PspPI	GGNCC	7 cut(s)	25, 35, 338, 485, 1062, 1367, 1414
PspPPI	RGGWCCY	3 cut(s)	25, 485, 1062
PsuI	RGATCY	3 cut(s)	573, 969, 1278
RsaI	GTAC	6 cut(s)	515, 679, 751, 905, 1001, 1498
RsaNI	GTAC	6 cut(s)	514, 678, 750, 904, 1000, 1497
RseI	CAYNNNNRTG	2 cut(s)	597, 660
SacI	GAGCTC	1 cut(s)	481
SaqAI	TTAA	5 cut(s)	333, 387, 743, 1299, 1400
SatI	GCNGC	8 cut(s)	6, 109, 417, 783, 912, 1328, 1331, 1420
Sau3AI	GATC	9 cut(s)	70, 296, 573, 895, 937, 969, 1190, 1278, 1387
Sau96I	GGNCC	7 cut(s)	25, 35, 338, 485, 1062, 1367, 1414
ScaI	AGTACT	1 cut(s)	679
ScrFI	CCNGG	5 cut(s)	23, 701, 803, 1004, 1371
SduI	GDGCHC	2 cut(s)	481, 626
SfaNI	GCATC	6 cut(s)	153, 433, 515, 1036, 1149, 1431
SinI	GGWCC	5 cut(s)	25, 338, 485, 1062, 1414
SmiMI	CAYNNNNRTG	2 cut(s)	597, 660
SmlI	CTYRAG	1 cut(s)	458
SmoI	CTYRAG	1 cut(s)	458
SphI	GCATGC	1 cut(s)	602
SsiI	CCGC	4 cut(s)	108, 196, 417, 1417
SspMI	CTAG	7 cut(s)	224, 510, 824, 899, 915, 941, 1031
SstI	GAGCTC	1 cut(s)	481
StyD4I	CCNGG	5 cut(s)	21, 699, 801, 1002, 1369
StyI	CCWWGG	1 cut(s)	87
TaaI	ACNGT	4 cut(s)	121, 263, 1020, 1506
TaiI	ACGT	1 cut(s)	1596
TaqI	TCGA	3 cut(s)	363, 472, 1307
TatI	WGTACW	2 cut(s)	677, 1496
TauI	GCSGC	2 cut(s)	111, 419
TfiI	GAWTC	5 cut(s)	234, 379, 443, 929, 1304
Tru1I	TTAA	5 cut(s)	333, 387, 743, 1299, 1400
Tru9I	TTAA	5 cut(s)	333, 387, 743, 1299, 1400
TscAI	CASTG	4 cut(s)	126, 667, 734, 898
TseFI	GTSAC	4 cut(s)	52, 832, 1159, 1289
TseI	GCWGC	6 cut(s)	5, 782, 911, 1327, 1330, 1419
Tsp45I	GTSAC	4 cut(s)	52, 832, 1159, 1289
TspGWI	ACGGA	2 cut(s)	1291, 1467
TspRI	CASTG	4 cut(s)	126, 667, 734, 898
Van91I	CCANNNNNTGG	1 cut(s)	1268
VpaK11BI	GGWCC	5 cut(s)	25, 338, 485, 1062, 1414
VspI	ATTAAT	1 cut(s)	387
XapI	RAATTY	4 cut(s)	149, 723, 736, 858
XceI	RCATGY	1 cut(s)	602
XcmI	CCANNNNNNNNNTGG	2 cut(s)	29, 46
XmiI	GTMKAC	1 cut(s)	1230
XmnI	GAANNNNTTC	1 cut(s)	592
XspI	CTAG	7 cut(s)	224, 510, 824, 899, 915, 941, 1031
ZrmI	AGTACT	1 cut(s)	679
Zsp2I	ATGCAT	2 cut(s)	146, 1051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.