MADS-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45660 AT2G45660 |
| fragaria_vesca | FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 |
| malus_domestica | MD02G1197400.v1.1 MD07G1123600.v1.1 |
| prunus_persica | Prupe.2G151200_v2.0.a1 Prupe.2G151200_v2.0.a1 |
| pyrus_communis | pycom02g16090 pycom07g11630 |
| rosa_chinensis | RchiOBHm_Chr1g0351691 |
| rosa_laevigata | RLG00000028389 |
| rosa_multiflora | Rmu_sc0001144.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00303610 |
| rosa_rugosa | Rorug01G0220700 |
| rosa_samantha | Rh1AG234700 Rh1BG205300 Rh1CG219400 Rh1DG232300 |
| rosa_wichuraiana | Rw1G020440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 28, 70, 78 |
| AclI | AACGTT | 1 cut(s) | 202 |
| AcsI | RAATTY | 1 cut(s) | 167 |
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 24 |
| AgsI | TTSAA | 2 cut(s) | 200, 317 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 597, 629 |
| AluBI | AGCT | 4 cut(s) | 103, 160, 271, 488 |
| AluI | AGCT | 4 cut(s) | 103, 160, 271, 488 |
| Alw21I | GWGCWC | 1 cut(s) | 105 |
| Alw26I | GTCTC | 1 cut(s) | 593 |
| ApeKI | GCWGC | 2 cut(s) | 268, 360 |
| ApoI | RAATTY | 1 cut(s) | 167 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 95 |
| AspLEI | GCGC | 1 cut(s) | 133 |
| AsuHPI | GGTGA | 1 cut(s) | 49 |
| AsuII | TTCGAA | 1 cut(s) | 323 |
| BanII | GRGCYC | 1 cut(s) | 105 |
| BauI | CACGAG | 1 cut(s) | 43 |
| BbsI | GAAGAC | 1 cut(s) | 74 |
| Bbv12I | GWGCWC | 1 cut(s) | 105 |
| BbvCI | CCTCAGC | 1 cut(s) | 123 |
| BbvI | GCAGC | 2 cut(s) | 280, 372 |
| BceAI | ACGGC | 1 cut(s) | 33 |
| BcoDI | GTCTC | 1 cut(s) | 593 |
| BfaI | CTAG | 3 cut(s) | 288, 350, 643 |
| BisI | GCNGC | 3 cut(s) | 71, 269, 361 |
| BlsI | GCNGC | 3 cut(s) | 72, 270, 362 |
| BmsI | GCATC | 2 cut(s) | 109, 319 |
| BpiI | GAAGAC | 1 cut(s) | 74 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 144, 176 |
| Bpu10I | CCTNAGC | 1 cut(s) | 123 |
| Bpu14I | TTCGAA | 1 cut(s) | 323 |
| BpuEI | CTTGAG | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 1 cut(s) | 530 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 24 |
| Bse1I | ACTGG | 2 cut(s) | 252, 539 |
| BseDI | CCNNGG | 1 cut(s) | 530 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 24 |
| BseMII | CTCAG | 1 cut(s) | 114 |
| BseNI | ACTGG | 2 cut(s) | 252, 539 |
| BseRI | GAGGAG | 1 cut(s) | 415 |
| BseXI | GCAGC | 2 cut(s) | 280, 372 |
| BsgI | GTGCAG | 1 cut(s) | 287 |
| BsiHKAI | GWGCWC | 1 cut(s) | 105 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 24 |
| BsmAI | GTCTC | 1 cut(s) | 593 |
| BsmI | GAATGC | 1 cut(s) | 414 |
| Bsp119I | TTCGAA | 1 cut(s) | 323 |
| Bsp1286I | GDGCHC | 1 cut(s) | 105 |
| Bsp143I | GATC | 1 cut(s) | 632 |
| BspACI | CCGC | 3 cut(s) | 28, 70, 78 |
| BspCNI | CTCAG | 1 cut(s) | 115 |
| BspT104I | TTCGAA | 1 cut(s) | 323 |
| BsrI | ACTGG | 2 cut(s) | 252, 539 |
| BssECI | CCNNGG | 1 cut(s) | 530 |
| BssMI | GATC | 1 cut(s) | 632 |
| BssSI | CACGAG | 1 cut(s) | 43 |
| Bst2BI | CACGAG | 1 cut(s) | 43 |
| Bst4CI | ACNGT | 1 cut(s) | 393 |
| BstBI | TTCGAA | 1 cut(s) | 323 |
| BstC8I | GCNNGC | 3 cut(s) | 175, 185, 568 |
| BstDEI | CTNAG | 2 cut(s) | 123, 562 |
| BstHHI | GCGC | 1 cut(s) | 133 |
| BstKTI | GATC | 1 cut(s) | 635 |
| BstMAI | GTCTC | 1 cut(s) | 593 |
| BstMBI | GATC | 1 cut(s) | 632 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 128, 274, 307, 428, 532 |
| BstNSI | RCATGY | 1 cut(s) | 187 |
| BstV1I | GCAGC | 2 cut(s) | 280, 372 |
| BstV2I | GAAGAC | 1 cut(s) | 74 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsIMutI | CAGTG | 1 cut(s) | 259 |
| Cac8I | GCNNGC | 3 cut(s) | 175, 185, 568 |
| CfoI | GCGC | 1 cut(s) | 133 |
| CviAII | CATG | 3 cut(s) | 184, 278, 292 |
| DdeI | CTNAG | 2 cut(s) | 123, 562 |
| DpnI | GATC | 1 cut(s) | 634 |
| DpnII | GATC | 1 cut(s) | 632 |
| EciI | GGCGGA | 1 cut(s) | 43 |
| Ecl136II | GAGCTC | 1 cut(s) | 103 |
| Eco24I | GRGCYC | 1 cut(s) | 105 |
| Eco53kI | GAGCTC | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| EcoICRI | GAGCTC | 1 cut(s) | 103 |
| EcoRI | GAATTC | 1 cut(s) | 167 |
| EcoT38I | GRGCYC | 1 cut(s) | 105 |
| FaeI | CATG | 3 cut(s) | 187, 281, 295 |
| FaiI | YATR | 7 cut(s) | 185, 207, 216, 279, 293, 358, 524 |
| FatI | CATG | 3 cut(s) | 183, 277, 291 |
| Fnu4HI | GCNGC | 3 cut(s) | 71, 269, 361 |
| FriOI | GRGCYC | 1 cut(s) | 105 |
| Fsp4HI | GCNGC | 3 cut(s) | 71, 269, 361 |
| FspBI | CTAG | 3 cut(s) | 288, 350, 643 |
| GlaI | GCGC | 1 cut(s) | 132 |
| GluI | GCNGC | 3 cut(s) | 71, 269, 361 |
| HhaI | GCGC | 1 cut(s) | 133 |
| Hin1II | CATG | 3 cut(s) | 187, 281, 295 |
| Hin6I | GCGC | 1 cut(s) | 131 |
| HinP1I | GCGC | 1 cut(s) | 131 |
| HinfI | GANTC | 2 cut(s) | 346, 477 |
| HphI | GGTGA | 1 cut(s) | 49 |
| Hpy166II | GTNNAC | 3 cut(s) | 257, 409, 439 |
| Hpy188I | TCNGA | 4 cut(s) | 87, 150, 498, 592 |
| Hpy188III | TCNNGA | 2 cut(s) | 64, 314 |
| Hpy8I | GTNNAC | 3 cut(s) | 257, 409, 439 |
| HpyAV | CCTTC | 3 cut(s) | 70, 85, 421 |
| HpyCH4III | ACNGT | 1 cut(s) | 393 |
| HpyCH4IV | ACGT | 1 cut(s) | 202 |
| HpyCH4V | TGCA | 5 cut(s) | 187, 268, 360, 376, 526 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 128, 274, 307, 428, 532 |
| HpyF3I | CTNAG | 2 cut(s) | 123, 562 |
| HpySE526I | ACGT | 1 cut(s) | 202 |
| Hsp92II | CATG | 3 cut(s) | 187, 281, 295 |
| HspAI | GCGC | 1 cut(s) | 131 |
| Kzo9I | GATC | 1 cut(s) | 632 |
| LpnPI | CCDG | 7 cut(s) | 32, 265, 419, 552, 580, 585, 636 |
| Lsp1109I | GCAGC | 2 cut(s) | 280, 372 |
| LweI | GCATC | 2 cut(s) | 109, 319 |
| MaeI | CTAG | 3 cut(s) | 288, 350, 643 |
| MaeII | ACGT | 1 cut(s) | 202 |
| MaeIII | GTNAC | 1 cut(s) | 55 |
| MalI | GATC | 1 cut(s) | 634 |
| MboI | GATC | 1 cut(s) | 632 |
| MboII | GAAGA | 4 cut(s) | 74, 100, 133, 642 |
| MfeI | CAATTG | 1 cut(s) | 458 |
| MhlI | GDGCHC | 1 cut(s) | 105 |
| MluCI | AATT | 3 cut(s) | 167, 458, 605 |
| MlyI | GAGTC | 2 cut(s) | 355, 486 |
| MmeI | TCCRAC | 1 cut(s) | 375 |
| MnlI | CCTC | 8 cut(s) | 18, 118, 146, 393, 491, 492, 511, 525 |
| MroXI | GAANNNNTTC | 1 cut(s) | 95 |
| MspA1I | CMGCKG | 1 cut(s) | 488 |
| MunI | CAATTG | 1 cut(s) | 458 |
| Mva1269I | GAATGC | 1 cut(s) | 414 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 128, 274, 307, 428, 532 |
| NdeII | GATC | 1 cut(s) | 632 |
| NlaIII | CATG | 3 cut(s) | 187, 281, 295 |
| NmuCI | GTSAC | 1 cut(s) | 55 |
| NspI | RCATGY | 1 cut(s) | 187 |
| NspV | TTCGAA | 1 cut(s) | 323 |
| PaeI | GCATGC | 1 cut(s) | 187 |
| PctI | GAATGC | 1 cut(s) | 414 |
| PdmI | GAANNNNTTC | 1 cut(s) | 95 |
| PkrI | GCNGC | 3 cut(s) | 72, 270, 362 |
| PleI | GAGTC | 2 cut(s) | 354, 485 |
| PpsI | GAGTC | 2 cut(s) | 354, 485 |
| Psp124BI | GAGCTC | 1 cut(s) | 105 |
| Psp1406I | AACGTT | 1 cut(s) | 202 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 571, 603 |
| PvuII | CAGCTG | 1 cut(s) | 488 |
| SacI | GAGCTC | 1 cut(s) | 105 |
| SatI | GCNGC | 3 cut(s) | 71, 269, 361 |
| Sau3AI | GATC | 1 cut(s) | 632 |
| SchI | GAGTC | 2 cut(s) | 355, 486 |
| SduI | GDGCHC | 1 cut(s) | 105 |
| SetI | ASST | 8 cut(s) | 62, 105, 129, 162, 205, 273, 438, 490 |
| SfaNI | GCATC | 2 cut(s) | 109, 319 |
| SfuI | TTCGAA | 1 cut(s) | 323 |
| SmlI | CTYRAG | 1 cut(s) | 272 |
| SmoI | CTYRAG | 1 cut(s) | 272 |
| SphI | GCATGC | 1 cut(s) | 187 |
| Sse9I | AATT | 3 cut(s) | 167, 458, 605 |
| SsiI | CCGC | 3 cut(s) | 28, 70, 78 |
| SspMI | CTAG | 3 cut(s) | 288, 350, 643 |
| SstI | GAGCTC | 1 cut(s) | 105 |
| TaaI | ACNGT | 1 cut(s) | 393 |
| TaiI | ACGT | 1 cut(s) | 205 |
| TaqI | TCGA | 5 cut(s) | 65, 99, 323, 418, 635 |
| TasI | AATT | 3 cut(s) | 167, 458, 605 |
| TauI | GCSGC | 1 cut(s) | 73 |
| TscAI | CASTG | 1 cut(s) | 259 |
| TseFI | GTSAC | 1 cut(s) | 55 |
| TseI | GCWGC | 2 cut(s) | 268, 360 |
| Tsp45I | GTSAC | 1 cut(s) | 55 |
| TspDTI | ATGAA | 3 cut(s) | 294, 311, 601 |
| TspGWI | ACGGA | 1 cut(s) | 343 |
| TspRI | CASTG | 1 cut(s) | 259 |
| XapI | RAATTY | 1 cut(s) | 167 |
| XceI | RCATGY | 1 cut(s) | 187 |
| XmnI | GAANNNNTTC | 1 cut(s) | 95 |
| XspI | CTAG | 3 cut(s) | 288, 350, 643 |