DNA repair and recombination protein RAD54-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G42670 AT3G42670 AT3G42670 AT3G42670 AT5G20420 |
| fragaria_vesca | FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 FvH4_7g25190 |
| prunus_persica | Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 Prupe.2G256800_v2.0.a1 |
| pyrus_communis | pycom07g20580 |
| rosa_chinensis | RchiOBHm_Chr1g0371111 |
| rosa_laevigata | RLG00000026985 |
| rosa_multiflora | Rmu_sc0003714.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00285980 |
| rosa_rugosa | Rorug01G0361300 Rorug01G0361300 Rorug01G0361400 Rorug01G0361500 Rorug01G0361500 |
| rosa_samantha | Rh1AG371800 Rh1BG335000 Rh1CG348400 Rh1DG366300 |
| rosa_wichuraiana | Rw1G032690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1523 |
| Acc36I | ACCTGC | 1 cut(s) | 1523 |
| Acc65I | GGTACC | 1 cut(s) | 754 |
| AccB1I | GGYRCC | 1 cut(s) | 754 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2851 |
| AccI | GTMKAC | 3 cut(s) | 1499, 2522, 3013 |
| AciI | CCGC | 1 cut(s) | 859 |
| AcuI | CTGAAG | 4 cut(s) | 462, 1767, 2285, 3519 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 1442, 2113, 2222, 2359, 2652, 2851 |
| AflII | CTTAAG | 1 cut(s) | 1853 |
| AflIII | ACRYGT | 1 cut(s) | 1894 |
| AgeI | ACCGGT | 1 cut(s) | 2359 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2291 |
| AjnI | CCWGG | 9 cut(s) | 235, 1810, 2215, 2275, 2321, 2602, 3267, 3451, 3595 |
| AleI | CACNNNNGTG | 1 cut(s) | 2016 |
| Alw26I | GTCTC | 2 cut(s) | 2942, 3325 |
| Ama87I | CYCGRG | 1 cut(s) | 2859 |
| AoxI | GGCC | 6 cut(s) | 233, 931, 947, 2428, 2762, 3593 |
| ApeKI | GCWGC | 3 cut(s) | 1778, 3167, 3518 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1792, 1824, 2543, 2575 |
| AsiGI | ACCGGT | 1 cut(s) | 2359 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 328, 1622, 2270, 2726 |
| Asp718I | GGTACC | 1 cut(s) | 754 |
| AspS9I | GGNCC | 9 cut(s) | 167, 401, 932, 1274, 1521, 1609, 1808, 2429, 2797 |
| AsuC2I | CCSGG | 3 cut(s) | 752, 3009, 3400 |
| AsuHPI | GGTGA | 5 cut(s) | 809, 1313, 1769, 3121, 3794 |
| AsuII | TTCGAA | 1 cut(s) | 940 |
| AvaI | CYCGRG | 1 cut(s) | 2859 |
| AvaII | GGWCC | 7 cut(s) | 167, 401, 1274, 1521, 1609, 1808, 2797 |
| AxyI | CCTNAGG | 1 cut(s) | 2591 |
| BaeGI | GKGCMC | 1 cut(s) | 2631 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2471, 2504 |
| BamHI | GGATCC | 2 cut(s) | 747, 3724 |
| BanI | GGYRCC | 1 cut(s) | 754 |
| BanII | GRGCYC | 1 cut(s) | 2610 |
| BauI | CACGAG | 1 cut(s) | 3582 |
| BbsI | GAAGAC | 4 cut(s) | 1389, 2556, 3660, 3792 |
| BbvI | GCAGC | 3 cut(s) | 1765, 3179, 3505 |
| BccI | CCATC | 7 cut(s) | 150, 703, 838, 1403, 2161, 2845, 3199 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 8, 42, 1307, 1341 |
| BciT130I | CCWGG | 9 cut(s) | 237, 1812, 2217, 2277, 2323, 2604, 3269, 3453, 3597 |
| BciVI | GTATCC | 2 cut(s) | 3114, 3700 |
| BclI | TGATCA | 8 cut(s) | 268, 457, 1198, 1234, 1645, 2238, 3126, 3810 |
| BcnI | CCSGG | 3 cut(s) | 752, 3009, 3400 |
| BcoDI | GTCTC | 2 cut(s) | 2942, 3325 |
| BfaI | CTAG | 9 cut(s) | 321, 1425, 2471, 2502, 2612, 2618, 3116, 3341, 3525 |
| BfmI | CTRYAG | 4 cut(s) | 2389, 3014, 3165, 3576 |
| BfrI | CTTAAG | 1 cut(s) | 1853 |
| BfuAI | ACCTGC | 1 cut(s) | 1523 |
| BfuI | GTATCC | 2 cut(s) | 3114, 3700 |
| BisI | GCNGC | 4 cut(s) | 860, 1779, 3168, 3519 |
| BlpI | GCTNAGC | 1 cut(s) | 33 |
| BlsI | GCNGC | 4 cut(s) | 861, 1780, 3169, 3520 |
| BmcAI | AGTACT | 4 cut(s) | 509, 1054, 1336, 2616 |
| Bme18I | GGWCC | 7 cut(s) | 167, 401, 1274, 1521, 1609, 1808, 2797 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2291 |
| BmeT110I | CYCGRG | 1 cut(s) | 2859 |
| BmgT120I | GGNCC | 9 cut(s) | 167, 401, 932, 1274, 1521, 1609, 1808, 2429, 2797 |
| BpiI | GAAGAC | 4 cut(s) | 1389, 2556, 3660, 3792 |
| BpmI | CTGGAG | 3 cut(s) | 1524, 2238, 3428 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 33 |
| Bpu14I | TTCGAA | 1 cut(s) | 940 |
| BpuEI | CTTGAG | 3 cut(s) | 954, 2568, 3233 |
| BpuMI | CCSGG | 3 cut(s) | 752, 3009, 3400 |
| BsaBI | GATNNNNATC | 1 cut(s) | 51 |
| BsaI | GGTCTC | 1 cut(s) | 2942 |
| BsaJI | CCNNGG | 8 cut(s) | 397, 1246, 2275, 2603, 3108, 3133, 3149, 3399 |
| BsaWI | WCCGGW | 2 cut(s) | 304, 2359 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1679, 1694, 1709, 1724 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 1442, 2113, 2222, 2359, 2652, 2851 |
| Bse118I | RCCGGY | 1 cut(s) | 2359 |
| Bse1I | ACTGG | 4 cut(s) | 370, 1098, 1507, 1612 |
| Bse21I | CCTNAGG | 1 cut(s) | 2591 |
| Bse3DI | GCAATG | 3 cut(s) | 118, 2241, 3318 |
| Bse8I | GATNNNNATC | 1 cut(s) | 51 |
| BseBI | CCWGG | 9 cut(s) | 237, 1812, 2217, 2277, 2323, 2604, 3269, 3453, 3597 |
| BseDI | CCNNGG | 8 cut(s) | 397, 1246, 2275, 2603, 3108, 3133, 3149, 3399 |
| BseGI | GGATG | 9 cut(s) | 37, 142, 1152, 1396, 1414, 1418, 1465, 2038, 3145 |
| BseJI | GATNNNNATC | 1 cut(s) | 51 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 1442, 2113, 2222, 2359, 2652, 2851 |
| BseMI | GCAATG | 3 cut(s) | 118, 2241, 3318 |
| BseMII | CTCAG | 7 cut(s) | 834, 909, 1047, 1689, 2582, 2939, 3735 |
| BseNI | ACTGG | 4 cut(s) | 370, 1098, 1507, 1612 |
| BseRI | GAGGAG | 5 cut(s) | 1694, 1697, 1700, 1715, 2009 |
| BseSI | GKGCMC | 1 cut(s) | 2631 |
| BseXI | GCAGC | 3 cut(s) | 1765, 3179, 3505 |
| BseYI | CCCAGC | 1 cut(s) | 2222 |
| BsgI | GTGCAG | 1 cut(s) | 665 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2380 |
| BshFI | GGCC | 6 cut(s) | 235, 933, 949, 2430, 2764, 3595 |
| BshNI | GGYRCC | 1 cut(s) | 754 |
| BshTI | ACCGGT | 1 cut(s) | 2359 |
| BsiEI | CGRYCG | 1 cut(s) | 2380 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2859 |
| BsiSI | CCGG | 6 cut(s) | 305, 752, 2145, 2360, 3009, 3399 |
| BslFI | GGGAC | 1 cut(s) | 3177 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 1442, 2113, 2222, 2359, 2652, 2851 |
| BsmAI | GTCTC | 2 cut(s) | 2942, 3325 |
| BsmFI | GGGAC | 1 cut(s) | 3177 |
| BsmI | GAATGC | 2 cut(s) | 1127, 3800 |
| BsnI | GGCC | 6 cut(s) | 235, 933, 949, 2430, 2764, 3595 |
| Bso31I | GGTCTC | 1 cut(s) | 2942 |
| BsoBI | CYCGRG | 1 cut(s) | 2859 |
| Bsp119I | TTCGAA | 1 cut(s) | 940 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2610, 2631 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 33 |
| BspACI | CCGC | 1 cut(s) | 859 |
| BspANI | GGCC | 6 cut(s) | 235, 933, 949, 2430, 2764, 3595 |
| BspCNI | CTCAG | 7 cut(s) | 835, 910, 1048, 1690, 2583, 2940, 3736 |
| BspHI | TCATGA | 2 cut(s) | 349, 3813 |
| BspMAI | CTGCAG | 1 cut(s) | 3169 |
| BspMI | ACCTGC | 1 cut(s) | 1523 |
| BspQI | GCTCTTC | 1 cut(s) | 193 |
| BspT104I | TTCGAA | 1 cut(s) | 940 |
| BspT107I | GGYRCC | 1 cut(s) | 754 |
| BspTI | CTTAAG | 1 cut(s) | 1853 |
| BspTNI | GGTCTC | 1 cut(s) | 2942 |
| BsrDI | GCAATG | 3 cut(s) | 118, 2241, 3318 |
| BsrFI | RCCGGY | 1 cut(s) | 2359 |
| BsrI | ACTGG | 4 cut(s) | 370, 1098, 1507, 1612 |
| BssAI | RCCGGY | 1 cut(s) | 2359 |
| BssECI | CCNNGG | 8 cut(s) | 397, 1246, 2275, 2603, 3108, 3133, 3149, 3399 |
| BssNAI | GTATAC | 2 cut(s) | 1500, 2523 |
| BssSI | CACGAG | 1 cut(s) | 3582 |
| BssT1I | CCWWGG | 5 cut(s) | 397, 1246, 3108, 3133, 3149 |
| Bst1107I | GTATAC | 2 cut(s) | 1500, 2523 |
| Bst2BI | CACGAG | 1 cut(s) | 3582 |
| Bst2UI | CCWGG | 9 cut(s) | 237, 1812, 2217, 2277, 2323, 2604, 3269, 3453, 3597 |
| Bst4CI | ACNGT | 7 cut(s) | 515, 1005, 1298, 2097, 2378, 3278, 3336 |
| Bst6I | CTCTTC | 4 cut(s) | 8, 193, 1038, 1435 |
| BstAFI | CTTAAG | 1 cut(s) | 1853 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 908, 3173 |
| BstBI | TTCGAA | 1 cut(s) | 940 |
| BstF5I | GGATG | 9 cut(s) | 37, 142, 1152, 1396, 1414, 1418, 1465, 2038, 3145 |
| BstMAI | GTCTC | 2 cut(s) | 2942, 3325 |
| BstMCI | CGRYCG | 1 cut(s) | 2380 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 868, 908, 1131, 3173, 3601 |
| BstNI | CCWGG | 9 cut(s) | 237, 1812, 2217, 2277, 2323, 2604, 3269, 3453, 3597 |
| BstNSI | RCATGY | 5 cut(s) | 817, 906, 1898, 2459, 2495 |
| BstSFI | CTRYAG | 4 cut(s) | 2389, 3014, 3165, 3576 |
| BstSLI | GKGCMC | 1 cut(s) | 2631 |
| BstV1I | GCAGC | 3 cut(s) | 1765, 3179, 3505 |
| BstV2I | GAAGAC | 4 cut(s) | 1389, 2556, 3660, 3792 |
| BstX2I | RGATCY | 8 cut(s) | 301, 747, 1960, 1972, 2147, 2349, 3403, 3724 |
| BstYI | RGATCY | 8 cut(s) | 301, 747, 1960, 1972, 2147, 2349, 3403, 3724 |
| BstZ17I | GTATAC | 2 cut(s) | 1500, 2523 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2591 |
| BsuI | GTATCC | 2 cut(s) | 3114, 3700 |
| BsuRI | GGCC | 6 cut(s) | 235, 933, 949, 2430, 2764, 3595 |
| BtsCI | GGATG | 9 cut(s) | 37, 142, 1152, 1396, 1414, 1418, 1465, 2038, 3145 |
| BtsI | GCAGTG | 1 cut(s) | 3486 |
| BtsIMutI | CAGTG | 8 cut(s) | 648, 1001, 1105, 1303, 1619, 3042, 3371, 3486 |
| BveI | ACCTGC | 1 cut(s) | 1523 |
| CciI | TCATGA | 2 cut(s) | 349, 3813 |
| Cfr10I | RCCGGY | 1 cut(s) | 2359 |
| Cfr13I | GGNCC | 9 cut(s) | 167, 401, 932, 1274, 1521, 1609, 1808, 2429, 2797 |
| CseI | GACGC | 2 cut(s) | 860, 1209 |
| CsiI | ACCWGGT | 3 cut(s) | 2321, 3267, 3451 |
| CspAI | ACCGGT | 1 cut(s) | 2359 |
| DraI | TTTAAA | 1 cut(s) | 718 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2291 |
| Eam1104I | CTCTTC | 4 cut(s) | 8, 193, 1038, 1435 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2291 |
| EarI | CTCTTC | 4 cut(s) | 8, 193, 1038, 1435 |
| Eco130I | CCWWGG | 5 cut(s) | 397, 1246, 3108, 3133, 3149 |
| Eco147I | AGGCCT | 2 cut(s) | 235, 3595 |
| Eco24I | GRGCYC | 1 cut(s) | 2610 |
| Eco31I | GGTCTC | 1 cut(s) | 2942 |
| Eco32I | GATATC | 1 cut(s) | 247 |
| Eco47I | GGWCC | 7 cut(s) | 167, 401, 1274, 1521, 1609, 1808, 2797 |
| Eco57I | CTGAAG | 4 cut(s) | 462, 1767, 2285, 3519 |
| Eco81I | CCTNAGG | 1 cut(s) | 2591 |
| Eco88I | CYCGRG | 1 cut(s) | 2859 |
| EcoO109I | RGGNCCY | 3 cut(s) | 401, 932, 1521 |
| EcoRI | GAATTC | 2 cut(s) | 490, 2333 |
| EcoRII | CCWGG | 9 cut(s) | 235, 1810, 2215, 2275, 2321, 2602, 3267, 3451, 3595 |
| EcoRV | GATATC | 1 cut(s) | 247 |
| EcoT14I | CCWWGG | 5 cut(s) | 397, 1246, 3108, 3133, 3149 |
| EcoT22I | ATGCAT | 2 cut(s) | 819, 2457 |
| EcoT38I | GRGCYC | 1 cut(s) | 2610 |
| ErhI | CCWWGG | 5 cut(s) | 397, 1246, 3108, 3133, 3149 |
| FaqI | GGGAC | 1 cut(s) | 3177 |
| FauNDI | CATATG | 1 cut(s) | 3807 |
| FbaI | TGATCA | 8 cut(s) | 268, 457, 1198, 1234, 1645, 2238, 3126, 3810 |
| FblI | GTMKAC | 3 cut(s) | 1499, 2522, 3013 |
| Fnu4HI | GCNGC | 4 cut(s) | 860, 1779, 3168, 3519 |
| FokI | GGATG | 9 cut(s) | 24, 129, 1159, 1403, 1405, 1421, 1452, 2045, 3132 |
| FriOI | GRGCYC | 1 cut(s) | 2610 |
| Fsp4HI | GCNGC | 4 cut(s) | 860, 1779, 3168, 3519 |
| FspBI | CTAG | 9 cut(s) | 321, 1425, 2471, 2502, 2612, 2618, 3116, 3341, 3525 |
| GluI | GCNGC | 4 cut(s) | 860, 1779, 3168, 3519 |
| GsaI | CCCAGC | 1 cut(s) | 2226 |
| GsuI | CTGGAG | 3 cut(s) | 1524, 2238, 3428 |
| HaeIII | GGCC | 6 cut(s) | 235, 933, 949, 2430, 2764, 3595 |
| HapII | CCGG | 6 cut(s) | 305, 752, 2145, 2360, 3009, 3399 |
| HgaI | GACGC | 2 cut(s) | 860, 1209 |
| HincII | GTYRAC | 2 cut(s) | 382, 394 |
| HindII | GTYRAC | 2 cut(s) | 382, 394 |
| HinfI | GANTC | 8 cut(s) | 154, 353, 977, 1766, 2552, 2903, 3542, 3553 |
| HpaI | GTTAAC | 1 cut(s) | 394 |
| HpaII | CCGG | 6 cut(s) | 305, 752, 2145, 2360, 3009, 3399 |
| HphI | GGTGA | 5 cut(s) | 809, 1313, 1769, 3121, 3794 |
| Hpy166II | GTNNAC | 9 cut(s) | 382, 394, 532, 1500, 1932, 2523, 2566, 3014, 3274 |
| Hpy8I | GTNNAC | 9 cut(s) | 382, 394, 532, 1500, 1932, 2523, 2566, 3014, 3274 |
| Hpy99I | CGWCG | 1 cut(s) | 876 |
| HpyCH4III | ACNGT | 7 cut(s) | 515, 1005, 1298, 2097, 2378, 3278, 3336 |
| HpyCH4IV | ACGT | 2 cut(s) | 2017, 3421 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 868, 908, 1131, 3173, 3601 |
| HpySE526I | ACGT | 2 cut(s) | 2017, 3421 |
| KpnI | GGTACC | 1 cut(s) | 758 |
| Ksp22I | TGATCA | 8 cut(s) | 268, 457, 1198, 1234, 1645, 2238, 3126, 3810 |
| KspAI | GTTAAC | 1 cut(s) | 394 |
| LguI | GCTCTTC | 1 cut(s) | 193 |
| Lsp1109I | GCAGC | 3 cut(s) | 1765, 3179, 3505 |
| MabI | ACCWGGT | 3 cut(s) | 2321, 3267, 3451 |
| MaeI | CTAG | 9 cut(s) | 321, 1425, 2471, 2502, 2612, 2618, 3116, 3341, 3525 |
| MaeII | ACGT | 2 cut(s) | 2017, 3421 |
| MaeIII | GTNAC | 6 cut(s) | 601, 809, 1100, 1897, 2413, 3280 |
| MflI | RGATCY | 8 cut(s) | 301, 747, 1960, 1972, 2147, 2349, 3403, 3724 |
| MhlI | GDGCHC | 2 cut(s) | 2610, 2631 |
| MlyI | GAGTC | 3 cut(s) | 347, 2546, 3536 |
| MmeI | TCCRAC | 1 cut(s) | 3519 |
| Mph1103I | ATGCAT | 2 cut(s) | 819, 2457 |
| MroXI | GAANNNNTTC | 4 cut(s) | 328, 1622, 2270, 2726 |
| MseI | TTAA | 8 cut(s) | 393, 429, 717, 1140, 1526, 1854, 2072, 2340 |
| MslI | CAYNNNNRTG | 2 cut(s) | 147, 2016 |
| MspA1I | CMGCKG | 1 cut(s) | 3518 |
| MspCI | CTTAAG | 1 cut(s) | 1853 |
| MspI | CCGG | 6 cut(s) | 305, 752, 2145, 2360, 3009, 3399 |
| Mva1269I | GAATGC | 2 cut(s) | 1127, 3800 |
| MvaI | CCWGG | 9 cut(s) | 237, 1812, 2217, 2277, 2323, 2604, 3269, 3453, 3597 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 868, 908, 1131, 3173, 3601 |
| NciI | CCSGG | 3 cut(s) | 752, 3009, 3400 |
| NdeI | CATATG | 1 cut(s) | 3807 |
| NmuCI | GTSAC | 2 cut(s) | 809, 1100 |
| NsiI | ATGCAT | 2 cut(s) | 819, 2457 |
| NspI | RCATGY | 5 cut(s) | 817, 906, 1898, 2459, 2495 |
| NspV | TTCGAA | 1 cut(s) | 940 |
| OliI | CACNNNNGTG | 1 cut(s) | 2016 |
| PaeI | GCATGC | 1 cut(s) | 2495 |
| PaeR7I | CTCGAG | 1 cut(s) | 2859 |
| PagI | TCATGA | 2 cut(s) | 349, 3813 |
| PaqCI | CACCTGC | 1 cut(s) | 1523 |
| PceI | AGGCCT | 2 cut(s) | 235, 3595 |
| PciI | ACATGT | 1 cut(s) | 1894 |
| PciSI | GCTCTTC | 1 cut(s) | 193 |
| PctI | GAATGC | 2 cut(s) | 1127, 3800 |
| PdmI | GAANNNNTTC | 4 cut(s) | 328, 1622, 2270, 2726 |
| PfeI | GAWTC | 5 cut(s) | 154, 977, 1766, 2903, 3553 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2851 |
| PfoI | TCCNGGA | 1 cut(s) | 2215 |
| PinAI | ACCGGT | 1 cut(s) | 2359 |
| PkrI | GCNGC | 4 cut(s) | 861, 1780, 3169, 3520 |
| PleI | GAGTC | 3 cut(s) | 347, 2546, 3536 |
| PpsI | GAGTC | 3 cut(s) | 347, 2546, 3536 |
| PpuMI | RGGWCCY | 2 cut(s) | 401, 1521 |
| PscI | ACATGT | 1 cut(s) | 1894 |
| Psp5II | RGGWCCY | 2 cut(s) | 401, 1521 |
| Psp6I | CCWGG | 9 cut(s) | 235, 1810, 2215, 2275, 2321, 2602, 3267, 3451, 3595 |
| PspFI | CCCAGC | 1 cut(s) | 2222 |
| PspGI | CCWGG | 9 cut(s) | 235, 1810, 2215, 2275, 2321, 2602, 3267, 3451, 3595 |
| PspPI | GGNCC | 9 cut(s) | 167, 401, 932, 1274, 1521, 1609, 1808, 2429, 2797 |
| PspPPI | RGGWCCY | 2 cut(s) | 401, 1521 |
| PspXI | VCTCGAGB | 1 cut(s) | 2859 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3257, 3289 |
| PstI | CTGCAG | 1 cut(s) | 3169 |
| PsuI | RGATCY | 8 cut(s) | 301, 747, 1960, 1972, 2147, 2349, 3403, 3724 |
| PvuII | CAGCTG | 1 cut(s) | 3518 |
| RseI | CAYNNNNRTG | 2 cut(s) | 147, 2016 |
| SapI | GCTCTTC | 1 cut(s) | 193 |
| SaqAI | TTAA | 8 cut(s) | 393, 429, 717, 1140, 1526, 1854, 2072, 2340 |
| SatI | GCNGC | 4 cut(s) | 860, 1779, 3168, 3519 |
| Sau96I | GGNCC | 9 cut(s) | 167, 401, 932, 1274, 1521, 1609, 1808, 2429, 2797 |
| ScaI | AGTACT | 4 cut(s) | 509, 1054, 1336, 2616 |
| SchI | GAGTC | 3 cut(s) | 347, 2546, 3536 |
| SduI | GDGCHC | 2 cut(s) | 2610, 2631 |
| SexAI | ACCWGGT | 3 cut(s) | 2321, 3267, 3451 |
| SfcI | CTRYAG | 4 cut(s) | 2389, 3014, 3165, 3576 |
| Sfr274I | CTCGAG | 1 cut(s) | 2859 |
| SfuI | TTCGAA | 1 cut(s) | 940 |
| SinI | GGWCC | 7 cut(s) | 167, 401, 1274, 1521, 1609, 1808, 2797 |
| SlaI | CTCGAG | 1 cut(s) | 2859 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 147, 2016 |
| SmlI | CTYRAG | 5 cut(s) | 969, 1853, 2583, 2859, 3212 |
| SmoI | CTYRAG | 5 cut(s) | 969, 1853, 2583, 2859, 3212 |
| SphI | GCATGC | 1 cut(s) | 2495 |
| SseBI | AGGCCT | 2 cut(s) | 235, 3595 |
| SsiI | CCGC | 1 cut(s) | 859 |
| SspI | AATATT | 2 cut(s) | 2140, 2697 |
| SspMI | CTAG | 9 cut(s) | 321, 1425, 2471, 2502, 2612, 2618, 3116, 3341, 3525 |
| StuI | AGGCCT | 2 cut(s) | 235, 3595 |
| StyI | CCWWGG | 5 cut(s) | 397, 1246, 3108, 3133, 3149 |
| TaaI | ACNGT | 7 cut(s) | 515, 1005, 1298, 2097, 2378, 3278, 3336 |
| TaiI | ACGT | 2 cut(s) | 2020, 3424 |
| TatI | WGTACW | 5 cut(s) | 507, 1052, 1334, 2614, 3093 |
| TauI | GCSGC | 1 cut(s) | 862 |
| TfiI | GAWTC | 5 cut(s) | 154, 977, 1766, 2903, 3553 |
| Tru1I | TTAA | 8 cut(s) | 393, 429, 717, 1140, 1526, 1854, 2072, 2340 |
| Tru9I | TTAA | 8 cut(s) | 393, 429, 717, 1140, 1526, 1854, 2072, 2340 |
| TscAI | CASTG | 8 cut(s) | 648, 1008, 1105, 1303, 1619, 3049, 3371, 3493 |
| TseFI | GTSAC | 2 cut(s) | 809, 1100 |
| TseI | GCWGC | 3 cut(s) | 1778, 3167, 3518 |
| Tsp45I | GTSAC | 2 cut(s) | 809, 1100 |
| TspGWI | ACGGA | 1 cut(s) | 1505 |
| TspRI | CASTG | 8 cut(s) | 648, 1008, 1105, 1303, 1619, 3049, 3371, 3493 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2851 |
| Vha464I | CTTAAG | 1 cut(s) | 1853 |
| VpaK11BI | GGWCC | 7 cut(s) | 167, 401, 1274, 1521, 1609, 1808, 2797 |
| XbaI | TCTAGA | 1 cut(s) | 3340 |
| XceI | RCATGY | 5 cut(s) | 817, 906, 1898, 2459, 2495 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 404 |
| XhoI | CTCGAG | 1 cut(s) | 2859 |
| XmiI | GTMKAC | 3 cut(s) | 1499, 2522, 3013 |
| XmnI | GAANNNNTTC | 4 cut(s) | 328, 1622, 2270, 2726 |
| XspI | CTAG | 9 cut(s) | 321, 1425, 2471, 2502, 2612, 2618, 3116, 3341, 3525 |
| ZrmI | AGTACT | 4 cut(s) | 509, 1054, 1336, 2616 |
| Zsp2I | ATGCAT | 2 cut(s) | 819, 2457 |