DNA RNA polymerases superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0324591 RchiOBHm_Chr1g0336161 RchiOBHm_Chr3g0476711 RchiOBHm_Chr3g0476731 RchiOBHm_Chr5g0016771 RchiOBHm_Chr5g0016801 RchiOBHm_Chr5g0016921 |
| rosa_laevigata | RLG00000023755 RLG00000032271 |
| rosa_multiflora | Rmu_sc0003630.1_g000004 Rmu_sc0003630.1_g000009 Rmu_sc0008053.1_g000027 |
| rosa_roxburghii | Rroxscaffold_4G00325360 Rroxscaffold_4G00326230 Rroxscaffold_6G00405050 |
| rosa_rugosa | Rorug03G0156700 |
| rosa_samantha | Rh5BG137500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 60 |
| AcoI | YGGCCR | 1 cut(s) | 252 |
| AcsI | RAATTY | 1 cut(s) | 330 |
| AcyI | GRCGYC | 1 cut(s) | 57 |
| AfaI | GTAC | 1 cut(s) | 78 |
| AgsI | TTSAA | 4 cut(s) | 29, 184, 236, 408 |
| AluBI | AGCT | 2 cut(s) | 88, 316 |
| AluI | AGCT | 2 cut(s) | 88, 316 |
| Alw21I | GWGCWC | 1 cut(s) | 486 |
| Alw26I | GTCTC | 1 cut(s) | 374 |
| AoxI | GGCC | 4 cut(s) | 252, 287, 451, 521 |
| ApoI | RAATTY | 1 cut(s) | 330 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 2 cut(s) | 393, 446 |
| BaeGI | GKGCMC | 1 cut(s) | 109 |
| BalI | TGGCCA | 1 cut(s) | 254 |
| BanII | GRGCYC | 1 cut(s) | 511 |
| Bbv12I | GWGCWC | 1 cut(s) | 486 |
| BccI | CCATC | 1 cut(s) | 292 |
| BcoDI | GTCTC | 1 cut(s) | 374 |
| BfaI | CTAG | 2 cut(s) | 143, 317 |
| BfmI | CTRYAG | 1 cut(s) | 61 |
| BmiI | GGNNCC | 1 cut(s) | 463 |
| BmsI | GCATC | 2 cut(s) | 407, 520 |
| BsaHI | GRCGYC | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 1 cut(s) | 454 |
| BseDI | CCNNGG | 1 cut(s) | 454 |
| BseSI | GKGCMC | 1 cut(s) | 109 |
| BsgI | GTGCAG | 1 cut(s) | 183 |
| BshFI | GGCC | 4 cut(s) | 254, 289, 453, 523 |
| BsiHKAI | GWGCWC | 1 cut(s) | 486 |
| BsmAI | GTCTC | 1 cut(s) | 374 |
| BsmI | GAATGC | 1 cut(s) | 343 |
| BsnI | GGCC | 4 cut(s) | 254, 289, 453, 523 |
| Bsp1286I | GDGCHC | 3 cut(s) | 109, 486, 511 |
| Bsp143I | GATC | 1 cut(s) | 247 |
| Bsp19I | CCATGG | 1 cut(s) | 454 |
| BspANI | GGCC | 4 cut(s) | 254, 289, 453, 523 |
| BspLI | GGNNCC | 1 cut(s) | 463 |
| BssECI | CCNNGG | 1 cut(s) | 454 |
| BssMI | GATC | 1 cut(s) | 247 |
| BssNI | GRCGYC | 1 cut(s) | 57 |
| BssT1I | CCWWGG | 1 cut(s) | 454 |
| Bst4CI | ACNGT | 1 cut(s) | 232 |
| BstACI | GRCGYC | 1 cut(s) | 57 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 334 |
| BstC8I | GCNNGC | 2 cut(s) | 396, 497 |
| BstDEI | CTNAG | 1 cut(s) | 266 |
| BstDSI | CCRYGG | 1 cut(s) | 454 |
| BstEII | GGTNACC | 1 cut(s) | 241 |
| BstKTI | GATC | 1 cut(s) | 250 |
| BstMAI | GTCTC | 1 cut(s) | 374 |
| BstMBI | GATC | 1 cut(s) | 247 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 334 |
| BstNSI | RCATGY | 1 cut(s) | 499 |
| BstPI | GGTNACC | 1 cut(s) | 241 |
| BstSFI | CTRYAG | 1 cut(s) | 61 |
| BstSLI | GKGCMC | 1 cut(s) | 109 |
| BsuRI | GGCC | 4 cut(s) | 254, 289, 453, 523 |
| BtgI | CCRYGG | 1 cut(s) | 454 |
| BtsI | GCAGTG | 1 cut(s) | 171 |
| BtsIMutI | CAGTG | 1 cut(s) | 171 |
| Cac8I | GCNNGC | 2 cut(s) | 396, 497 |
| Csp6I | GTAC | 1 cut(s) | 77 |
| CviAII | CATG | 2 cut(s) | 455, 496 |
| CviQI | GTAC | 1 cut(s) | 77 |
| DdeI | CTNAG | 1 cut(s) | 266 |
| DpnI | GATC | 1 cut(s) | 249 |
| DpnII | GATC | 1 cut(s) | 247 |
| EaeI | YGGCCR | 1 cut(s) | 252 |
| Eco130I | CCWWGG | 1 cut(s) | 454 |
| Eco147I | AGGCCT | 1 cut(s) | 523 |
| Eco24I | GRGCYC | 1 cut(s) | 511 |
| Eco91I | GGTNACC | 1 cut(s) | 241 |
| EcoO65I | GGTNACC | 1 cut(s) | 241 |
| EcoT14I | CCWWGG | 1 cut(s) | 454 |
| EcoT38I | GRGCYC | 1 cut(s) | 511 |
| ErhI | CCWWGG | 1 cut(s) | 454 |
| FaeI | CATG | 2 cut(s) | 458, 499 |
| FaiI | YATR | 7 cut(s) | 63, 191, 296, 428, 456, 497, 528 |
| FatI | CATG | 2 cut(s) | 454, 495 |
| FriOI | GRGCYC | 1 cut(s) | 511 |
| FspBI | CTAG | 2 cut(s) | 143, 317 |
| HaeIII | GGCC | 4 cut(s) | 254, 289, 453, 523 |
| Hin1I | GRCGYC | 1 cut(s) | 57 |
| Hin1II | CATG | 2 cut(s) | 458, 499 |
| HinfI | GANTC | 1 cut(s) | 365 |
| HphI | GGTGA | 2 cut(s) | 393, 446 |
| Hpy188I | TCNGA | 1 cut(s) | 228 |
| HpyAV | CCTTC | 5 cut(s) | 96, 122, 414, 431, 443 |
| HpyCH4III | ACNGT | 1 cut(s) | 232 |
| HpyCH4IV | ACGT | 3 cut(s) | 57, 150, 417 |
| HpyCH4V | TGCA | 4 cut(s) | 164, 328, 398, 499 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 334 |
| HpyF3I | CTNAG | 1 cut(s) | 266 |
| HpySE526I | ACGT | 3 cut(s) | 57, 150, 417 |
| Hsp92I | GRCGYC | 1 cut(s) | 57 |
| Hsp92II | CATG | 2 cut(s) | 458, 499 |
| Kzo9I | GATC | 1 cut(s) | 247 |
| LmnI | GCTCC | 3 cut(s) | 85, 133, 313 |
| LpnPI | CCDG | 8 cut(s) | 30, 138, 224, 236, 333, 375, 503, 519 |
| LweI | GCATC | 2 cut(s) | 407, 520 |
| MaeI | CTAG | 2 cut(s) | 143, 317 |
| MaeII | ACGT | 3 cut(s) | 57, 150, 417 |
| MaeIII | GTNAC | 2 cut(s) | 53, 241 |
| MalI | GATC | 1 cut(s) | 249 |
| MboI | GATC | 1 cut(s) | 247 |
| MboII | GAAGA | 3 cut(s) | 17, 212, 360 |
| MhlI | GDGCHC | 3 cut(s) | 109, 486, 511 |
| MlsI | TGGCCA | 1 cut(s) | 254 |
| MluCI | AATT | 1 cut(s) | 330 |
| MluNI | TGGCCA | 1 cut(s) | 254 |
| MnlI | CCTC | 2 cut(s) | 205, 423 |
| Mox20I | TGGCCA | 1 cut(s) | 254 |
| MroXI | GAANNNNTTC | 1 cut(s) | 24 |
| MscI | TGGCCA | 1 cut(s) | 254 |
| MseI | TTAA | 1 cut(s) | 518 |
| Msp20I | TGGCCA | 1 cut(s) | 254 |
| Mva1269I | GAATGC | 1 cut(s) | 343 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 334 |
| NcoI | CCATGG | 1 cut(s) | 454 |
| NdeII | GATC | 1 cut(s) | 247 |
| NlaIII | CATG | 2 cut(s) | 458, 499 |
| NlaIV | GGNNCC | 1 cut(s) | 463 |
| NmuCI | GTSAC | 1 cut(s) | 53 |
| NspI | RCATGY | 1 cut(s) | 499 |
| PaeI | GCATGC | 1 cut(s) | 499 |
| PceI | AGGCCT | 1 cut(s) | 523 |
| PctI | GAATGC | 1 cut(s) | 343 |
| PdmI | GAANNNNTTC | 1 cut(s) | 24 |
| PfeI | GAWTC | 1 cut(s) | 365 |
| PspEI | GGTNACC | 1 cut(s) | 241 |
| PspN4I | GGNNCC | 1 cut(s) | 463 |
| RsaI | GTAC | 1 cut(s) | 78 |
| RsaNI | GTAC | 1 cut(s) | 77 |
| SaqAI | TTAA | 1 cut(s) | 518 |
| Sau3AI | GATC | 1 cut(s) | 247 |
| SduI | GDGCHC | 3 cut(s) | 109, 486, 511 |
| SetI | ASST | 7 cut(s) | 60, 90, 153, 243, 318, 406, 420 |
| SfaNI | GCATC | 2 cut(s) | 407, 520 |
| SfcI | CTRYAG | 1 cut(s) | 61 |
| SphI | GCATGC | 1 cut(s) | 499 |
| Sse9I | AATT | 1 cut(s) | 330 |
| SseBI | AGGCCT | 1 cut(s) | 523 |
| SspMI | CTAG | 2 cut(s) | 143, 317 |
| StuI | AGGCCT | 1 cut(s) | 523 |
| StyI | CCWWGG | 1 cut(s) | 454 |
| TaaI | ACNGT | 1 cut(s) | 232 |
| TaiI | ACGT | 3 cut(s) | 60, 153, 420 |
| TaqI | TCGA | 2 cut(s) | 423, 505 |
| TasI | AATT | 1 cut(s) | 330 |
| TatI | WGTACW | 1 cut(s) | 76 |
| TfiI | GAWTC | 1 cut(s) | 365 |
| Tru1I | TTAA | 1 cut(s) | 518 |
| Tru9I | TTAA | 1 cut(s) | 518 |
| TscAI | CASTG | 1 cut(s) | 171 |
| TseFI | GTSAC | 1 cut(s) | 53 |
| Tsp45I | GTSAC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 1 cut(s) | 213 |
| TspGWI | ACGGA | 1 cut(s) | 231 |
| TspRI | CASTG | 1 cut(s) | 171 |
| XapI | RAATTY | 1 cut(s) | 330 |
| XceI | RCATGY | 1 cut(s) | 499 |
| XmnI | GAANNNNTTC | 1 cut(s) | 24 |
| XspI | CTAG | 2 cut(s) | 143, 317 |
| ZraI | GACGTC | 1 cut(s) | 58 |