RchiOBHm_Chr1g0384251

Transducin beta-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0010104
Physical Location & Seq
Forward (+)
68215771 .. 68220143
4373 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ60709

Sequence Viewer

Length: 2040 bp
ATGCAAGCATTATTTTCATGCTCTGTAGTTTGCATTGTTCTTGTTGTGATCTTGTGGAACCTTGATGACTACAGCTGCTTGAAGACTGTAACAACATATGAAACCCTTGAAGCTGTGTGTGTAATTCCTTCTGGAACTCTTTTATCTTCCCGTTTCGGTTCATCCAAGCAGCGGAATGGGAAGAAAAGCAAGTCACCTGCAATATGTTTTATAACAGTTGGTGACCGTGGGATCGTACGAATTTGGAATTCTGAAGGTGCAGTTTGCCTATTTGAGCAGAAGTCCTCAGATGTTACTATCACCTCTGATGACGATGAATCAAAAAGGGGCTTTACTGCAGCTTTACTGCTTCCATCAGATCAAGGGCTGCTTTGTGTGACAGCTGATCAGGAGTTCCTTTTATATTCTCCTGTTGAAAGCCCTGAAGGGACCTTTGAATTTGTTCTAAGCAAAAGACTTGTAGGAAATAATGGAGAGATTCTGGATATGAAATTTCTAGGTGATGAGGAACAATTTATCGCTGTCGCCACAAATACTGAACAGGTACGAGTGTTTGATGTTGCATCCATGTCATGTTCTCATGTGTTGGCCGGTCATACTGAAATTGTTATGTGCCTTGACACCTGCGTATCAAGTTCTGGAAGAACACTTATAGTGACAGGAAGCAAGGATAATAGTGTTAGGTTGTGGGAATCAGAAAGCAGATGTTGCCTTGGTGTTGGCGTAGGTCACATGGGATCTGTTGGAGCTATTGCTTTCTCAAAGAAGCAGAGGGACTTCTTTGTCAGTGGTAGTAGTGATCGTACCCTCAAGGTCTGGAGTTTGGATGGTATCTCAGACAATGTGGAAAAGCCAATAAATTTGAAAGCAAAAGCTGTTGTAGCAGCCCACGATAAGGATATCAATTCAGTAGCTGTTGCACCAAATGATAGTTTAGTTTGTAGTGGTTCACAGGACCGCACTGCTTGTGTTTGGAGGCTTCCAGATCTTGTACCAGTAATTGTACTTAAGGGTCATAAAAGAGGGGTTTGGTCTGTAGAGTTTTCTCCAGTTGATCAATGCATTCTGACTACATCTGGTGATAAAACAATAAAGATATGGGCTATATCAGATGGCTCGTGCTTAAAATCATTTGAAGGACACATGTCAAGTGTATATCGAGCATCATTTCTTACTCGTGGGACCCAATTTATTTCTTCTGATGCTGATGGTTTGGTGAAGCTGTGGATGGTCAAAACAAATGAATGCATTGCTACATATGATCAGCATGAGGACAAGGTTTGGGCATTGACTGTTGGAAAGAAGACAGAAATGGTTGCAACTGGCAGCGGTGATGCTGCCATCAATCTGTGGTATGATTGTACTGCCTCTGATAAAGAGGAAGCTTTCCGCAGAGAGGAGGAAGGCGTCCTGAAAAGTCAAGAACTAGAAAATGCTGTCAAAGATGCTGACTATACTAAAGCAATCCAAATTGCATTTAAGCTTCGCAGGCCTCATAAACTTTATGAGTGTTTTCATGAACTTTTCAGGAAGAGAGGGGATGAAAAGCAGATAGAGAAAGCCCTTCATGACTTTGGCAACGAAGAGTTGGCGGTACTTTTTGAATATGTTAGGGAATGGAATACAAAGCCAAAGTTTTGCCATGTTGCCCAGTTCGTGTTCTTTAAAATTCTCAACATTTATAGTCCGACAGAGATTATTAAGGTAAAAGGCATTCAGAATCTTCTTGAAGCTCTCACCCCATATTCTCAGAGGCACTATAGCAGAGTAGACAGGCATGTGAGAAACACACTCCTGTTGGACTTCATTCTGCACTCGATGGCAGTTGTTGAACCAGATACAGGTGCTAGAGAATTGAATGAAGAGTCTTTGATTCCCTCTGATGTCAATCATGAGAATGAAACACGTAGTATGGAGGAGGATCGGAAACAGAAGCAGGCATCTGAAGGGTTGAAAGAAAAGGCAGCCTCGAGGAAACGGAAGTCAAAGAAATCAAAAGATGGTTCAAAGAAGAAAGCTAAAGCATCTAGCTTAGAATAG

Protein Analysis

679

Amino Acids

75.54

Weight (kDa)

6.26

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR3_2nd PF25172 67 - 326 6.7e-20 WDR3 second beta-propeller domain
Beta-prop_WDR5 PF25175 118 - 275 1.7e-19 WDR5 beta-propeller domain
WD40_MABP1-WDR62_2nd PF24782 123 - 275 2.7e-08 MABP1/WDR62 second WD40 domain
WD40_Gbeta PF25391 124 - 275 6.3e-09 G protein beta WD-40 repeat protein
Beta-prop_TEP1_2nd PF25047 152 - 278 3.2e-07 TEP-1 second beta-propeller
Beta-prop_WDR3_1st PF25173 155 - 276 5e-18 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 156 - 275 6.6e-15 THOC3 beta-propeller domain
WD40_Prp19 PF24814 158 - 276 8.4e-12 Prp19 WD40 domain
WD40_MABP1-WDR62_2nd PF24782 171 - 410 5.3e-17 MABP1/WDR62 second WD40 domain
WD40_WDHD1_1st PF24817 171 - 277 1.4e-08 WDHD1 first WD40 domain
WD40 PF00400 191 - 230 2.9e-07 WD domain, G-beta repeat
WD40_CDC20-Fz PF24807 212 - 275 7.9e-07 CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd PF25047 217 - 412 2.3e-16 TEP-1 second beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 235 - 378 5.2e-07 WDR36/Utp21 second beta-propeller domain
Beta-prop_THOC3 PF25174 243 - 452 4.3e-29 THOC3 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 244 - 452 9.8e-32 WDR3 second beta-propeller domain
Beta-prop_EML_2 PF23414 252 - 429 7.4e-14 Echinoderm microtubule-associated protein second beta-propeller
WD40_CDC20-Fz PF24807 288 - 451 1.6e-22 CDC20/Fizzy WD40 domain
Beta-prop_SCAP PF24017 290 - 414 4e-09 SCAP Beta-propeller
WD40_WDHD1_1st PF24817 290 - 380 5.7e-12 WDHD1 first WD40 domain
WD40_Prp19 PF24814 290 - 451 3.6e-24 Prp19 WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 292 - 374 1.5e-08 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st PF25173 292 - 451 1.5e-32 WDR3 first beta-propeller domain
WD40 PF00400 293 - 325 2.4e-06 WD domain, G-beta repeat
EIF3I PF24805 294 - 394 1.6e-10 EIF3I
Beta-prop_WDR5 PF25175 295 - 453 1.5e-34 WDR5 beta-propeller domain
Beta-prop_EML PF23409 296 - 391 6.5e-08 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR36-Utp21_2nd PF25168 296 - 456 1.4e-07 WDR36/Utp21 second beta-propeller domain
WDR55 PF24796 298 - 450 2.8e-14 WDR55
Beta-prop_EML PF23409 318 - 462 2.2e-11 Echinoderm microtubule-associated protein first beta-propeller
WD40 PF00400 332 - 367 2.7e-08 WD domain, G-beta repeat
Beta-prop_WDR90_POC16_2nd PF23393 352 - 459 5.8e-06 WDR90/POC16, second beta-propeller
WD40_Gbeta PF25391 352 - 456 2.3e-13 G protein beta WD-40 repeat protein
EIF3I PF24805 378 - 452 1.3e-08 EIF3I
Utp13 PF08625 474 - 607 1.8e-41 Utp13 specific WD40 associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 212
AarI CACCTGC 2 cut(s) 205, 632
AasI GACNNNNNNGTC 1 cut(s) 782
AbsI CCTCGAGG 1 cut(s) 1969
Acc36I ACCTGC 2 cut(s) 205, 632
AccI GTMKAC 1 cut(s) 1770
AciI CCGC 5 cut(s) 172, 958, 1329, 1390, 1592
AclWI GGATC 3 cut(s) 239, 745, 1929
AcoI YGGCCR 1 cut(s) 588
AcsI RAATTY 6 cut(s) 240, 247, 437, 491, 859, 1668
AcuI CTGAAG 3 cut(s) 273, 444, 1965
AcyI GRCGYC 1 cut(s) 1407
AfaI GTAC 7 cut(s) 237, 546, 805, 993, 1005, 1363, 1596
AfiI CCNNNNNNNGG 4 cut(s) 171, 895, 1396, 1841
AflII CTTAAG 1 cut(s) 1007
AflIII ACRYGT 2 cut(s) 1143, 1904
AlwI GGATC 3 cut(s) 239, 745, 1929
AlwNI CAGNNNCTG 1 cut(s) 914
Ama87I CYCGRG 1 cut(s) 1969
AoxI GGCC 2 cut(s) 588, 1490
ApeKI GCWGC 8 cut(s) 75, 169, 338, 367, 884, 1326, 1337, 1964
ApoI RAATTY 6 cut(s) 240, 247, 437, 491, 859, 1668
Asp700I GAANNNNTTC 1 cut(s) 441
AspS9I GGNCC 3 cut(s) 429, 955, 1182
AsuHPI GGTGA 8 cut(s) 186, 233, 292, 512, 1091, 1228, 1343, 1729
AvaI CYCGRG 1 cut(s) 1969
AvaII GGWCC 3 cut(s) 429, 955, 1182
BaeI ACNNNNGTAYC 4 cut(s) 536, 569, 612, 645
BauI CACGAG 2 cut(s) 1117, 1176
BbsI GAAGAC 2 cut(s) 89, 1310
BbvI GCAGC 8 cut(s) 62, 181, 350, 354, 896, 1324, 1338, 1976
BccI CCATC 8 cut(s) 361, 821, 1106, 1202, 1222, 1349, 1813, 1994
BclI TGATCA 3 cut(s) 385, 1054, 1261
BfaI CTAG 4 cut(s) 497, 1427, 1848, 2028
BfmI CTRYAG 5 cut(s) 24, 70, 336, 1035, 1759
BfrI CTTAAG 1 cut(s) 1007
BfuAI ACCTGC 2 cut(s) 205, 632
BglII AGATCT 1 cut(s) 985
BisI GCNGC 8 cut(s) 76, 170, 339, 368, 885, 1327, 1338, 1965
BlsI GCNGC 8 cut(s) 77, 171, 340, 369, 886, 1328, 1339, 1966
Bme18I GGWCC 3 cut(s) 429, 955, 1182
BmeT110I CYCGRG 1 cut(s) 1969
BmgT120I GGNCC 3 cut(s) 429, 955, 1182
BmiI GGNNCC 4 cut(s) 59, 430, 1183, 1184
BmrI ACTGGG 1 cut(s) 1645
BmsI GCATC 7 cut(s) 572, 1172, 1192, 1324, 1435, 1949, 2033
BmuI ACTGGG 1 cut(s) 1645
BoxI GACNNNNGTC 1 cut(s) 1144
BpiI GAAGAC 2 cut(s) 89, 1310
BpmI CTGGAG 2 cut(s) 838, 1032
BpuEI CTTGAG 1 cut(s) 794
BsaAI YACGTR 1 cut(s) 1907
BsaBI GATNNNNATC 1 cut(s) 1887
BsaHI GRCGYC 1 cut(s) 1407
BsaJI CCNNGG 2 cut(s) 226, 712
Bsc4I CCNNNNNNNGG 4 cut(s) 171, 895, 1396, 1841
Bse118I RCCGGY 1 cut(s) 590
Bse1I ACTGG 4 cut(s) 995, 1049, 1327, 1651
Bse3DI GCAATG 1 cut(s) 1248
Bse8I GATNNNNATC 1 cut(s) 1887
BseDI CCNNGG 2 cut(s) 226, 712
BseGI GGATG 5 cut(s) 161, 563, 832, 1233, 1546
BseJI GATNNNNATC 1 cut(s) 1887
BseLI CCNNNNNNNGG 4 cut(s) 171, 895, 1396, 1841
BseMI GCAATG 1 cut(s) 1248
BseMII CTCAG 3 cut(s) 300, 849, 1763
BseNI ACTGG 4 cut(s) 995, 1049, 1327, 1651
BseRI GAGGAG 2 cut(s) 1412, 1931
BseXI GCAGC 8 cut(s) 62, 181, 350, 354, 896, 1324, 1338, 1976
BsgI GTGCAG 2 cut(s) 279, 1796
BshFI GGCC 2 cut(s) 590, 1492
BsiHKCI CYCGRG 1 cut(s) 1969
BsiSI CCGG 1 cut(s) 591
BsiWI CGTACG 1 cut(s) 235
BslFI GGGAC 3 cut(s) 442, 788, 1195
BslI CCNNNNNNNGG 4 cut(s) 171, 895, 1396, 1841
BsmFI GGGAC 3 cut(s) 442, 788, 1195
BsmI GAATGC 3 cut(s) 1062, 1250, 1713
BsnI GGCC 2 cut(s) 590, 1492
BsoBI CYCGRG 1 cut(s) 1969
BspACI CCGC 5 cut(s) 172, 958, 1329, 1390, 1592
BspANI GGCC 2 cut(s) 590, 1492
BspCNI CTCAG 3 cut(s) 299, 848, 1762
BspHI TCATGA 3 cut(s) 1516, 1567, 1891
BspLI GGNNCC 4 cut(s) 59, 430, 1183, 1184
BspMAI CTGCAG 1 cut(s) 340
BspMI ACCTGC 2 cut(s) 205, 632
BspPI GGATC 3 cut(s) 239, 745, 1929
BspTI CTTAAG 1 cut(s) 1007
BsrDI GCAATG 1 cut(s) 1248
BsrFI RCCGGY 1 cut(s) 590
BsrI ACTGG 4 cut(s) 995, 1049, 1327, 1651
BssAI RCCGGY 1 cut(s) 590
BssECI CCNNGG 2 cut(s) 226, 712
BssNI GRCGYC 1 cut(s) 1407
BssSI CACGAG 2 cut(s) 1117, 1176
BssT1I CCWWGG 1 cut(s) 712
Bst2BI CACGAG 2 cut(s) 1117, 1176
Bst4CI ACNGT 4 cut(s) 88, 217, 227, 1294
Bst6I CTCTTC 3 cut(s) 1526, 1578, 1857
BstACI GRCGYC 1 cut(s) 1407
BstAFI CTTAAG 1 cut(s) 1007
BstAPI GCANNNNNTGC 1 cut(s) 708
BstBAI YACGTR 1 cut(s) 1907
BstC8I GCNNGC 3 cut(s) 6, 1490, 1938
BstDEI CTNAG 5 cut(s) 286, 446, 835, 1749, 2032
BstDSI CCRYGG 1 cut(s) 226
BstEII GGTNACC 1 cut(s) 221
BstF5I GGATG 5 cut(s) 161, 563, 832, 1233, 1546
BstMWI GCNNNNNNNGC 3 cut(s) 708, 881, 1489
BstNSI RCATGY 2 cut(s) 1147, 1781
BstPAI GACNNNNGTC 1 cut(s) 1144
BstPI GGTNACC 1 cut(s) 221
BstSFI CTRYAG 5 cut(s) 24, 70, 336, 1035, 1759
BstV1I GCAGC 8 cut(s) 62, 181, 350, 354, 896, 1324, 1338, 1976
BstV2I GAAGAC 2 cut(s) 89, 1310
BstX2I RGATCY 2 cut(s) 737, 985
BstYI RGATCY 2 cut(s) 737, 985
BsuRI GGCC 2 cut(s) 590, 1492
BtgI CCRYGG 1 cut(s) 226
BtsCI GGATG 5 cut(s) 161, 563, 832, 1233, 1546
BtsI GCAGTG 1 cut(s) 960
BtsIMutI CAGTG 2 cut(s) 793, 960
BveI ACCTGC 2 cut(s) 205, 632
Cac8I GCNNGC 3 cut(s) 6, 1490, 1938
CaiI CAGNNNCTG 1 cut(s) 914
CciI TCATGA 3 cut(s) 1516, 1567, 1891
Cfr10I RCCGGY 1 cut(s) 590
Cfr13I GGNCC 3 cut(s) 429, 955, 1182
CseI GACGC 1 cut(s) 1396
Csp6I GTAC 7 cut(s) 236, 545, 804, 992, 1004, 1362, 1595
CviQI GTAC 7 cut(s) 236, 545, 804, 992, 1004, 1362, 1595
DdeI CTNAG 5 cut(s) 286, 446, 835, 1749, 2032
DraI TTTAAA 1 cut(s) 1666
DrdI GACNNNNNNGTC 1 cut(s) 782
DseDI GACNNNNNNGTC 1 cut(s) 782
EaeI YGGCCR 1 cut(s) 588
Eam1104I CTCTTC 3 cut(s) 1526, 1578, 1857
EarI CTCTTC 3 cut(s) 1526, 1578, 1857
Eco130I CCWWGG 1 cut(s) 712
Eco147I AGGCCT 1 cut(s) 1492
Eco32I GATATC 1 cut(s) 901
Eco47I GGWCC 3 cut(s) 429, 955, 1182
Eco57I CTGAAG 3 cut(s) 273, 444, 1965
Eco88I CYCGRG 1 cut(s) 1969
Eco91I GGTNACC 1 cut(s) 221
EcoO109I RGGNCCY 2 cut(s) 429, 1182
EcoO65I GGTNACC 1 cut(s) 221
EcoRI GAATTC 1 cut(s) 247
EcoRV GATATC 1 cut(s) 901
EcoT14I CCWWGG 1 cut(s) 712
EcoT22I ATGCAT 2 cut(s) 1064, 1250
ErhI CCWWGG 1 cut(s) 712
FalI AAGNNNNNCTT 2 cut(s) 354, 386
FaqI GGGAC 3 cut(s) 442, 788, 1195
FauNDI CATATG 2 cut(s) 97, 1258
FbaI TGATCA 3 cut(s) 385, 1054, 1261
FblI GTMKAC 1 cut(s) 1770
Fnu4HI GCNGC 8 cut(s) 76, 170, 339, 368, 885, 1327, 1338, 1965
FokI GGATG 5 cut(s) 148, 550, 839, 1240, 1553
Fsp4HI GCNGC 8 cut(s) 76, 170, 339, 368, 885, 1327, 1338, 1965
FspBI CTAG 4 cut(s) 497, 1427, 1848, 2028
GluI GCNGC 8 cut(s) 76, 170, 339, 368, 885, 1327, 1338, 1965
GsuI CTGGAG 2 cut(s) 838, 1032
HaeIII GGCC 2 cut(s) 590, 1492
HapII CCGG 1 cut(s) 591
HgaI GACGC 1 cut(s) 1396
Hin1I GRCGYC 1 cut(s) 1407
HindIII AAGCTT 2 cut(s) 1383, 1481
HinfI GANTC 6 cut(s) 317, 478, 692, 1720, 1865, 1873
HpaII CCGG 1 cut(s) 591
HphI GGTGA 8 cut(s) 186, 233, 292, 512, 1091, 1228, 1343, 1729
Hpy166II GTNNAC 2 cut(s) 950, 1771
Hpy8I GTNNAC 2 cut(s) 950, 1771
HpyAV CCTTC 7 cut(s) 138, 248, 419, 1130, 1397, 1574, 1940
HpyCH4III ACNGT 4 cut(s) 88, 217, 227, 1294
HpyCH4IV ACGT 1 cut(s) 1906
HpyF10VI GCNNNNNNNGC 3 cut(s) 708, 881, 1489
HpyF3I CTNAG 5 cut(s) 286, 446, 835, 1749, 2032
HpySE526I ACGT 1 cut(s) 1906
Hsp92I GRCGYC 1 cut(s) 1407
KflI GGGWCCC 1 cut(s) 1182
Ksp22I TGATCA 3 cut(s) 385, 1054, 1261
LmnI GCTCC 1 cut(s) 746
Lsp1109I GCAGC 8 cut(s) 62, 181, 350, 354, 896, 1324, 1338, 1976
LweI GCATC 7 cut(s) 572, 1172, 1192, 1324, 1435, 1949, 2033
MaeI CTAG 4 cut(s) 497, 1427, 1848, 2028
MaeII ACGT 1 cut(s) 1906
MaeIII GTNAC 7 cut(s) 88, 192, 221, 292, 376, 655, 728
MflI RGATCY 2 cut(s) 737, 985
MlyI GAGTC 1 cut(s) 1874
MmeI TCCRAC 4 cut(s) 724, 1276, 1712, 1779
Mph1103I ATGCAT 2 cut(s) 1064, 1250
MroXI GAANNNNTTC 1 cut(s) 441
MseI TTAA 5 cut(s) 1008, 1124, 1479, 1665, 1701
MslI CAYNNNNRTG 1 cut(s) 1896
MspA1I CMGCKG 4 cut(s) 75, 172, 383, 1329
MspCI CTTAAG 1 cut(s) 1007
MspI CCGG 1 cut(s) 591
Mva1269I GAATGC 3 cut(s) 1062, 1250, 1713
MwoI GCNNNNNNNGC 3 cut(s) 708, 881, 1489
NdeI CATATG 2 cut(s) 97, 1258
NlaIV GGNNCC 4 cut(s) 59, 430, 1183, 1184
NmuCI GTSAC 5 cut(s) 192, 221, 376, 655, 728
NsiI ATGCAT 2 cut(s) 1064, 1250
NspI RCATGY 2 cut(s) 1147, 1781
PaeR7I CTCGAG 1 cut(s) 1969
PagI TCATGA 3 cut(s) 1516, 1567, 1891
PaqCI CACCTGC 2 cut(s) 205, 632
PceI AGGCCT 1 cut(s) 1492
PciI ACATGT 1 cut(s) 1143
PctI GAATGC 3 cut(s) 1062, 1250, 1713
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 5 cut(s) 317, 478, 692, 1720, 1873
Pfl23II CGTACG 1 cut(s) 235
PkrI GCNGC 8 cut(s) 77, 171, 340, 369, 886, 1328, 1339, 1966
PleI GAGTC 1 cut(s) 1873
PpsI GAGTC 1 cut(s) 1873
Ppu21I YACGTR 1 cut(s) 1907
PpuMI RGGWCCY 2 cut(s) 429, 1182
PscI ACATGT 1 cut(s) 1143
PshAI GACNNNNGTC 1 cut(s) 1144
PsiI TTATAA 1 cut(s) 212
Psp5II RGGWCCY 2 cut(s) 429, 1182
PspEI GGTNACC 1 cut(s) 221
PspLI CGTACG 1 cut(s) 235
PspN4I GGNNCC 4 cut(s) 59, 430, 1183, 1184
PspPI GGNCC 3 cut(s) 429, 955, 1182
PspPPI RGGWCCY 2 cut(s) 429, 1182
PspXI VCTCGAGB 1 cut(s) 1969
PstI CTGCAG 1 cut(s) 340
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 2 cut(s) 737, 985
PvuII CAGCTG 2 cut(s) 75, 383
RsaI GTAC 7 cut(s) 237, 546, 805, 993, 1005, 1363, 1596
RsaNI GTAC 7 cut(s) 236, 545, 804, 992, 1004, 1362, 1595
RseI CAYNNNNRTG 1 cut(s) 1896
SaqAI TTAA 5 cut(s) 1008, 1124, 1479, 1665, 1701
SatI GCNGC 8 cut(s) 76, 170, 339, 368, 885, 1327, 1338, 1965
Sau96I GGNCC 3 cut(s) 429, 955, 1182
SchI GAGTC 1 cut(s) 1874
SfaNI GCATC 7 cut(s) 572, 1172, 1192, 1324, 1435, 1949, 2033
SfcI CTRYAG 5 cut(s) 24, 70, 336, 1035, 1759
Sfr274I CTCGAG 1 cut(s) 1969
SinI GGWCC 3 cut(s) 429, 955, 1182
SlaI CTCGAG 1 cut(s) 1969
SmiMI CAYNNNNRTG 1 cut(s) 1896
SmlI CTYRAG 3 cut(s) 809, 1007, 1969
SmoI CTYRAG 3 cut(s) 809, 1007, 1969
SseBI AGGCCT 1 cut(s) 1492
SsiI CCGC 5 cut(s) 172, 958, 1329, 1390, 1592
SspMI CTAG 4 cut(s) 497, 1427, 1848, 2028
StuI AGGCCT 1 cut(s) 1492
StyI CCWWGG 1 cut(s) 712
TaaI ACNGT 4 cut(s) 88, 217, 227, 1294
TaiI ACGT 1 cut(s) 1909
TaqI TCGA 3 cut(s) 1159, 1817, 1970
TatI WGTACW 2 cut(s) 1003, 1361
TfiI GAWTC 5 cut(s) 317, 478, 692, 1720, 1873
Tru1I TTAA 5 cut(s) 1008, 1124, 1479, 1665, 1701
Tru9I TTAA 5 cut(s) 1008, 1124, 1479, 1665, 1701
TscAI CASTG 2 cut(s) 793, 967
TseFI GTSAC 5 cut(s) 192, 221, 376, 655, 728
TseI GCWGC 8 cut(s) 75, 169, 338, 367, 884, 1326, 1337, 1964
Tsp45I GTSAC 5 cut(s) 192, 221, 376, 655, 728
TspGWI ACGGA 1 cut(s) 1993
TspRI CASTG 2 cut(s) 793, 967
Vha464I CTTAAG 1 cut(s) 1007
VpaK11BI GGWCC 3 cut(s) 429, 955, 1182
XapI RAATTY 6 cut(s) 240, 247, 437, 491, 859, 1668
XceI RCATGY 2 cut(s) 1147, 1781
XhoI CTCGAG 1 cut(s) 1969
XmiI GTMKAC 1 cut(s) 1770
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 4 cut(s) 497, 1427, 1848, 2028
Zsp2I ATGCAT 2 cut(s) 1064, 1250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.