Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011271.1

Orthogroup ID

OG0010104

Physical Location & Seq

Genomic Coordinates Forward (+)

2876 .. 8519

Gene Structure 5644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011271.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3006 bp

atggcgtctctacctttgaagaagaactacaggtgcgtcccctctctgcaaccgttctactccggcggcgcctttgccgtctcatccgacggttccttcatcgcctgcgcttccggcgagtccattaacatcgtcgatgcctccaactcctctgtacgctccactctggaaggcgactccgaggccgtcactgctttaaccctcagccccgacgacaagttgctcttctcgtccggccacagtcgcctcattagggtttgggacctttccaccttcaaatgcgtccgctcttggaagggtcatgatgggcctgtgatgggaatggcttgtcacccatccggcggatatcttgccaccgccggagccgataagaaggttatagtttgggatgttgccggtagctttgccactcatcacttcaaaggtcaccaaggggttgtttctagtcttctctttcatccagatcctaccaagcaaattcttttctccgcaagtcatgatacaactgtgaacgtctgggatctagatactaagaagcgtgtcgcaacccttactgagcataactcaacggtaacttctatggcattatccgaagatgggcgcacattgctcacagctggaagagataaggttgtgatcttgtggaaccttgatgactacagctgcttgaagactgtaacaacatatgaaacccttgaagctgtgtgtgtaattccttctggaactcttttgtcttcccgtttcggttcatccaagcagcggaatgggaagaaaagcaagtcacctgcaatatgttttataacagttggtgaccgtgggatcgtacgaatttggaattctgaaggtgcagtttgcctatttgagcagaagtcctcagatgttactatcacctctgatgacgatgaatcaaaaaggggctttactgcagctttactgcttccatcagatcaagggctgctttgtgtgacagctgatcaggagttccttttatattctcctgttgaaagccctgaagggacctttgaatttgttctaagcaaaagacttgtaggaaataatggagagattgcccttgaagctgtgtgtgtaattccttctggaactcttttgtcttcccgtttcagttcatccaagcagcggaatgggaagaaaagcaagtcacctgcaatatgttttataacagttggtgaccgtgggatcgtacgaatttggaattctgaaggtgcagtttgcctatttgagcagaagtcctcagatgttactatcacctctgatgacgatgaatcaaaaaggggctttactgcagctttactgcttccatcagatcaagggctgctttgtgtgacagctgatcaggagttccttttatattctcctgttgaaagccctgaagggacctttgaatttgttctaagcaaaagacttgtaggaaataatggagagattctggatatgaaatttctaggtgatgaggaacaatttatcgctgtcgccacaaatactgaacaggtacgagtgtttgatgttgcatccatgtcatgttctcatgtgttggccggtcatactgaaattgttatgtgccttgacacctgcgtatcaagttctggaagaacacttatagtgacaggaagcaaggataatagtgttaggttgtgggaatcagaaagcagatgttgccttggtgttggcgtaggtcacatgggatctgttggagctattgctttctcaaagaagcagagggacttctttgtcagtggtagtagtgatcgtaccctcaaggtctggagtttggatggtatctcagacaatgtggaaaagccaataaatttgaaagcaaaagctgttgtagcagcccacgataaggatatcaattcagtagctgttgcaccaaatgatagtttagtttgtagtggttcacaggaccgcactgcttgtgtttggaggcttccagatcttgtaccagtaattgtacttaagggtcataaaagaggggtttggtctgtagagttttctccagttgatcaatgcattctgactacatctggtgataaaacaataaagatatgggctatatcagatggctcgtgcttaaaatcatttgaaggacacatgtcaagtgtatatcgagcatcatttcttactcgtgggacccaatttatttcttctgatgctgatggtttggtgaagctgtggatggtcaaaacaaatgaatgcattgctacatatgatcagcatgaggacaaggtttgggcattgactgttggaaagaagacagaaatggttgcaactggcagcggtgatgctgccatcaatctgtggtatgattgtactgcctctgataaagaggaagctttccgcagagaggaggaaggcgtcctgaaaagtcaagaactagaaaatgctgtcaaagatgctgactatactaaagcaatccaaattgcatttaagcttcgcaggcctcataaactttatgagtgttttcatgaacttttcaggaagagaggggatgaaaagcagatagagaaagcccttcatgactttggcaacgaagagttggcggtactttttgaatatgttagggaatggaatacaaagccaaagttttgccatgttgcccagttcgtgttctttaaaattctcaacatttatagtccaacagagataattaaggtaaaaggcattcagaatcttcttgaagctctcaccccatattctcagaggcactatagcagagtagacaggcatgtgagaaacacactcatgttggacttcattctgcactcgatggcagttgttgaaccagatacaggtgctagagaattgaatgaagagtctttgattccctctgatgtcagtcatgagaatgaaacacgtagtatggaggaggatcggaaacagaagcaggcatctgaagggttgaaagaaaaggcagcctcgaggaaacggaagtcaaagaaatcaaaagattgttcaaagaagaaagctaaagcatccagcttagaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0034388 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp13 WD40

Protein Analysis

1001

Amino Acids

110.09

Weight (kDa)

6.29

Isoelectric Point (pI)

40.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16750
fragaria_vesca	FvH4_7g34000 FvH4_7g34000
malus_domestica	MD01G1236400.v1.1 MD07G1309100.v1.1
prunus_persica	Prupe.2G326400_v2.0.a1 Prupe.2G326400_v2.0.a1
pyrus_communis	pycom01g24430 pycom07g28110
rosa_chinensis	RchiOBHm_Chr1g0384251
rosa_laevigata	RLG00000026054
rosa_multiflora	Rmu_sc0011271.1_g000002
rosa_roxburghii	Rroxscaffold_4G00276810
rosa_rugosa	Rorug01G0446100 Rorug01G0446200 Rorug01G0446200
rosa_samantha	Rh1AG471700 Rh1BG429400 Rh1CG442000 Rh1DG462100
rosa_wichuraiana	Rw1G040090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	800, 1178
AarI	CACCTGC	3 cut(s)	793, 1171, 1598
AasI	GACNNNNNNGTC	1 cut(s)	1748
AbsI	CCTCGAGG	1 cut(s)	2935
Acc36I	ACCTGC	3 cut(s)	793, 1171, 1598
AccB1I	GGYRCC	1 cut(s)	68
AccBSI	CCGCTC	1 cut(s)	288
AccI	GTMKAC	1 cut(s)	2736
AclWI	GGATC	6 cut(s)	458, 528, 827, 1205, 1711, 2895
AcoI	YGGCCR	2 cut(s)	235, 1554
AcuI	CTGAAG	5 cut(s)	861, 1032, 1239, 1410, 2931
AcyI	GRCGYC	3 cut(s)	5, 69, 2373
AfaI	GTAC	9 cut(s)	156, 825, 1203, 1512, 1771, 1959, 1971, 2329, 2562
AfiI	CCNNNNNNNGG	9 cut(s)	253, 317, 341, 597, 759, 1137, 1861, 2362, 2807
AflII	CTTAAG	1 cut(s)	1973
AflIII	ACRYGT	2 cut(s)	2109, 2870
Alw26I	GTCTC	2 cut(s)	12, 85
AlwI	GGATC	6 cut(s)	458, 528, 827, 1205, 1711, 2895
AlwNI	CAGNNNCTG	1 cut(s)	1880
Ama87I	CYCGRG	1 cut(s)	2935
AoxI	GGCC	5 cut(s)	183, 235, 308, 1554, 2456
Asp700I	GAANNNNTTC	2 cut(s)	1029, 1407
AspLEI	GCGC	3 cut(s)	71, 110, 603
AspS9I	GGNCC	6 cut(s)	262, 308, 1017, 1395, 1921, 2148
AvaI	CYCGRG	1 cut(s)	2935
AvaII	GGWCC	5 cut(s)	262, 1017, 1395, 1921, 2148
BaeI	ACNNNNGTAYC	6 cut(s)	492, 525, 1502, 1535, 1578, 1611
BanI	GGYRCC	1 cut(s)	68
BarI	GAAGNNNNNNTAC	2 cut(s)	11, 43
BauI	CACGAG	2 cut(s)	2083, 2142
BbsI	GAAGAC	5 cut(s)	440, 677, 726, 1104, 2276
BbvCI	CCTCAGC	1 cut(s)	203
BceAI	ACGGC	2 cut(s)	62, 170
BclI	TGATCA	4 cut(s)	973, 1351, 2020, 2227
BcoDI	GTCTC	2 cut(s)	12, 85
BfaI	CTAG	5 cut(s)	444, 524, 1463, 2393, 2814
BfmI	CTRYAG	6 cut(s)	28, 658, 924, 1302, 2001, 2725
BfoI	RGCGCY	1 cut(s)	72
BfrI	CTTAAG	1 cut(s)	1973
BfuAI	ACCTGC	3 cut(s)	793, 1171, 1598
BglII	AGATCT	1 cut(s)	1951
Bme18I	GGWCC	5 cut(s)	262, 1017, 1395, 1921, 2148
BmeT110I	CYCGRG	1 cut(s)	2935
BmgT120I	GGNCC	6 cut(s)	262, 308, 1017, 1395, 1921, 2148
BmiI	GGNNCC	9 cut(s)	70, 94, 263, 364, 647, 1018, 1396, 2149, 2150
BmrI	ACTGGG	1 cut(s)	2611
BmsI	GCATC	8 cut(s)	127, 1538, 2138, 2158, 2290, 2401, 2915, 2999
BmuI	ACTGGG	1 cut(s)	2611
BoxI	GACNNNNGTC	1 cut(s)	2110
BpiI	GAAGAC	5 cut(s)	440, 677, 726, 1104, 2276
BplI	GAGNNNNNCTC	2 cut(s)	548, 580
BpmI	CTGGAG	2 cut(s)	1804, 1998
Bpu10I	CCTNAGC	1 cut(s)	203
BpuEI	CTTGAG	1 cut(s)	1760
BsaAI	YACGTR	1 cut(s)	2873
BsaHI	GRCGYC	3 cut(s)	5, 69, 2373
BsaJI	CCNNGG	5 cut(s)	180, 430, 814, 1192, 1678
Bsc4I	CCNNNNNNNGG	9 cut(s)	253, 317, 341, 597, 759, 1137, 1861, 2362, 2807
Bse118I	RCCGGY	2 cut(s)	395, 1556
Bse1I	ACTGG	4 cut(s)	1961, 2015, 2293, 2617
Bse3DI	GCAATG	2 cut(s)	605, 2214
BseDI	CCNNGG	5 cut(s)	180, 430, 814, 1192, 1678
BseLI	CCNNNNNNNGG	9 cut(s)	253, 317, 341, 597, 759, 1137, 1861, 2362, 2807
BseMI	GCAATG	2 cut(s)	605, 2214
BseMII	CTCAG	6 cut(s)	217, 546, 888, 1266, 1815, 2729
BseNI	ACTGG	4 cut(s)	1961, 2015, 2293, 2617
BseRI	GAGGAG	3 cut(s)	139, 2378, 2897
BsgI	GTGCAG	3 cut(s)	867, 1245, 2762
BshFI	GGCC	5 cut(s)	185, 237, 310, 1556, 2458
BshNI	GGYRCC	1 cut(s)	68
BsiHKCI	CYCGRG	1 cut(s)	2935
BsiSI	CCGG	7 cut(s)	63, 114, 234, 339, 360, 396, 1557
BsiWI	CGTACG	2 cut(s)	823, 1201
BslFI	GGGAC	6 cut(s)	23, 275, 1030, 1408, 1754, 2161
BslI	CCNNNNNNNGG	9 cut(s)	253, 317, 341, 597, 759, 1137, 1861, 2362, 2807
BsmAI	GTCTC	2 cut(s)	12, 85
BsmBI	CGTCTC	2 cut(s)	12, 85
BsmFI	GGGAC	6 cut(s)	23, 275, 1030, 1408, 1754, 2161
BsmI	GAATGC	3 cut(s)	2028, 2216, 2679
BsnI	GGCC	5 cut(s)	185, 237, 310, 1556, 2458
BsoBI	CYCGRG	1 cut(s)	2935
BspANI	GGCC	5 cut(s)	185, 237, 310, 1556, 2458
BspCNI	CTCAG	6 cut(s)	216, 547, 887, 1265, 1814, 2728
BspHI	TCATGA	5 cut(s)	301, 496, 2482, 2533, 2857
BspLI	GGNNCC	9 cut(s)	70, 94, 263, 364, 647, 1018, 1396, 2149, 2150
BspMAI	CTGCAG	2 cut(s)	928, 1306
BspMI	ACCTGC	3 cut(s)	793, 1171, 1598
BspPI	GGATC	6 cut(s)	458, 528, 827, 1205, 1711, 2895
BspQI	GCTCTTC	1 cut(s)	230
BspT107I	GGYRCC	1 cut(s)	68
BspTI	CTTAAG	1 cut(s)	1973
BsrBI	CCGCTC	1 cut(s)	288
BsrDI	GCAATG	2 cut(s)	605, 2214
BsrFI	RCCGGY	2 cut(s)	395, 1556
BsrI	ACTGG	4 cut(s)	1961, 2015, 2293, 2617
BssAI	RCCGGY	2 cut(s)	395, 1556
BssECI	CCNNGG	5 cut(s)	180, 430, 814, 1192, 1678
BssNI	GRCGYC	3 cut(s)	5, 69, 2373
BssSI	CACGAG	2 cut(s)	2083, 2142
BssT1I	CCWWGG	2 cut(s)	430, 1678
Bst2BI	CACGAG	2 cut(s)	2083, 2142
Bst6I	CTCTTC	5 cut(s)	230, 616, 2492, 2544, 2823
BstACI	GRCGYC	3 cut(s)	5, 69, 2373
BstAFI	CTTAAG	1 cut(s)	1973
BstAPI	GCANNNNNTGC	1 cut(s)	1674
BstBAI	YACGTR	1 cut(s)	2873
BstC8I	GCNNGC	3 cut(s)	106, 2456, 2904
BstDSI	CCRYGG	2 cut(s)	814, 1192
BstEII	GGTNACC	3 cut(s)	425, 809, 1187
BstH2I	RGCGCY	1 cut(s)	72
BstHHI	GCGC	3 cut(s)	71, 110, 603
BstMAI	GTCTC	2 cut(s)	12, 85
BstMWI	GCNNNNNNNGC	8 cut(s)	114, 191, 243, 607, 1076, 1674, 1847, 2455
BstNSI	RCATGY	2 cut(s)	2113, 2747
BstPAI	GACNNNNGTC	1 cut(s)	2110
BstPI	GGTNACC	3 cut(s)	425, 809, 1187
BstSFI	CTRYAG	6 cut(s)	28, 658, 924, 1302, 2001, 2725
BstV2I	GAAGAC	5 cut(s)	440, 677, 726, 1104, 2276
BstX2I	RGATCY	4 cut(s)	463, 520, 1703, 1951
BstYI	RGATCY	4 cut(s)	463, 520, 1703, 1951
BsuRI	GGCC	5 cut(s)	185, 237, 310, 1556, 2458
BtgI	CCRYGG	2 cut(s)	814, 1192
BtgZI	GCGATG	1 cut(s)	85
BtsI	GCAGTG	2 cut(s)	189, 1926
BtsIMutI	CAGTG	3 cut(s)	189, 1759, 1926
BveI	ACCTGC	3 cut(s)	793, 1171, 1598
Cac8I	GCNNGC	3 cut(s)	106, 2456, 2904
CaiI	CAGNNNCTG	1 cut(s)	1880
CciI	TCATGA	5 cut(s)	301, 496, 2482, 2533, 2857
CfoI	GCGC	3 cut(s)	71, 110, 603
Cfr10I	RCCGGY	2 cut(s)	395, 1556
Cfr13I	GGNCC	6 cut(s)	262, 308, 1017, 1395, 1921, 2148
CseI	GACGC	3 cut(s)	25, 271, 2362
Csp6I	GTAC	9 cut(s)	155, 824, 1202, 1511, 1770, 1958, 1970, 2328, 2561
CviQI	GTAC	9 cut(s)	155, 824, 1202, 1511, 1770, 1958, 1970, 2328, 2561
DinI	GGCGCC	1 cut(s)	70
DraI	TTTAAA	1 cut(s)	2632
DrdI	GACNNNNNNGTC	1 cut(s)	1748
DseDI	GACNNNNNNGTC	1 cut(s)	1748
EaeI	YGGCCR	2 cut(s)	235, 1554
Eam1104I	CTCTTC	5 cut(s)	230, 616, 2492, 2544, 2823
EarI	CTCTTC	5 cut(s)	230, 616, 2492, 2544, 2823
EciI	GGCGGA	1 cut(s)	357
Eco130I	CCWWGG	2 cut(s)	430, 1678
Eco147I	AGGCCT	1 cut(s)	2458
Eco32I	GATATC	2 cut(s)	347, 1867
Eco47I	GGWCC	5 cut(s)	262, 1017, 1395, 1921, 2148
Eco57I	CTGAAG	5 cut(s)	861, 1032, 1239, 1410, 2931
Eco88I	CYCGRG	1 cut(s)	2935
Eco91I	GGTNACC	3 cut(s)	425, 809, 1187
EcoO109I	RGGNCCY	4 cut(s)	262, 1017, 1395, 2148
EcoO65I	GGTNACC	3 cut(s)	425, 809, 1187
EcoRI	GAATTC	2 cut(s)	835, 1213
EcoRV	GATATC	2 cut(s)	347, 1867
EcoT14I	CCWWGG	2 cut(s)	430, 1678
EcoT22I	ATGCAT	2 cut(s)	2030, 2216
EgeI	GGCGCC	1 cut(s)	70
EheI	GGCGCC	1 cut(s)	70
ErhI	CCWWGG	2 cut(s)	430, 1678
Esp3I	CGTCTC	2 cut(s)	12, 85
FalI	AAGNNNNNCTT	6 cut(s)	209, 241, 942, 974, 1320, 1352
FaqI	GGGAC	6 cut(s)	23, 275, 1030, 1408, 1754, 2161
FauNDI	CATATG	2 cut(s)	685, 2224
FbaI	TGATCA	4 cut(s)	973, 1351, 2020, 2227
FblI	GTMKAC	1 cut(s)	2736
FspBI	CTAG	5 cut(s)	444, 524, 1463, 2393, 2814
GlaI	GCGC	3 cut(s)	70, 109, 602
GsuI	CTGGAG	2 cut(s)	1804, 1998
HaeII	RGCGCY	1 cut(s)	72
HaeIII	GGCC	5 cut(s)	185, 237, 310, 1556, 2458
HapII	CCGG	7 cut(s)	63, 114, 234, 339, 360, 396, 1557
HgaI	GACGC	3 cut(s)	25, 271, 2362
HhaI	GCGC	3 cut(s)	71, 110, 603
Hin1I	GRCGYC	3 cut(s)	5, 69, 2373
Hin6I	GCGC	3 cut(s)	69, 108, 601
HinP1I	GCGC	3 cut(s)	69, 108, 601
HindIII	AAGCTT	2 cut(s)	2349, 2447
HinfI	GANTC	9 cut(s)	119, 176, 905, 1283, 1444, 1658, 2686, 2831, 2839
HpaII	CCGG	7 cut(s)	63, 114, 234, 339, 360, 396, 1557
Hpy166II	GTNNAC	3 cut(s)	511, 1916, 2737
Hpy8I	GTNNAC	3 cut(s)	511, 1916, 2737
Hpy99I	CGWCG	3 cut(s)	92, 137, 215
HpyCH4IV	ACGT	2 cut(s)	513, 2872
HpyF10VI	GCNNNNNNNGC	8 cut(s)	114, 191, 243, 607, 1076, 1674, 1847, 2455
HpySE526I	ACGT	2 cut(s)	513, 2872
Hsp92I	GRCGYC	3 cut(s)	5, 69, 2373
HspAI	GCGC	3 cut(s)	69, 108, 601
KasI	GGCGCC	1 cut(s)	68
KflI	GGGWCCC	1 cut(s)	2148
Ksp22I	TGATCA	4 cut(s)	973, 1351, 2020, 2227
LguI	GCTCTTC	1 cut(s)	230
LmnI	GCTCC	3 cut(s)	164, 362, 1712
LweI	GCATC	8 cut(s)	127, 1538, 2138, 2158, 2290, 2401, 2915, 2999
MaeI	CTAG	5 cut(s)	444, 524, 1463, 2393, 2814
MaeII	ACGT	2 cut(s)	513, 2872
MbiI	CCGCTC	1 cut(s)	288
MflI	RGATCY	4 cut(s)	463, 520, 1703, 1951
Mly113I	GGCGCC	1 cut(s)	69
MlyI	GAGTC	3 cut(s)	128, 170, 2840
MmeI	TCCRAC	6 cut(s)	111, 168, 1690, 2242, 2678, 2745
Mph1103I	ATGCAT	2 cut(s)	2030, 2216
MroXI	GAANNNNTTC	2 cut(s)	1029, 1407
MseI	TTAA	7 cut(s)	126, 197, 1974, 2090, 2445, 2631, 2667
MslI	CAYNNNNRTG	2 cut(s)	2759, 2862
MspA1I	CMGCKG	7 cut(s)	617, 663, 760, 971, 1138, 1349, 2295
MspCI	CTTAAG	1 cut(s)	1973
MspI	CCGG	7 cut(s)	63, 114, 234, 339, 360, 396, 1557
Mva1269I	GAATGC	3 cut(s)	2028, 2216, 2679
MwoI	GCNNNNNNNGC	8 cut(s)	114, 191, 243, 607, 1076, 1674, 1847, 2455
NarI	GGCGCC	1 cut(s)	69
NdeI	CATATG	2 cut(s)	685, 2224
NlaIV	GGNNCC	9 cut(s)	70, 94, 263, 364, 647, 1018, 1396, 2149, 2150
NsiI	ATGCAT	2 cut(s)	2030, 2216
NspI	RCATGY	2 cut(s)	2113, 2747
PaeR7I	CTCGAG	1 cut(s)	2935
PagI	TCATGA	5 cut(s)	301, 496, 2482, 2533, 2857
PaqCI	CACCTGC	3 cut(s)	793, 1171, 1598
PceI	AGGCCT	1 cut(s)	2458
PciI	ACATGT	1 cut(s)	2109
PciSI	GCTCTTC	1 cut(s)	230
PctI	GAATGC	3 cut(s)	2028, 2216, 2679
PdmI	GAANNNNTTC	2 cut(s)	1029, 1407
PfeI	GAWTC	6 cut(s)	905, 1283, 1444, 1658, 2686, 2839
Pfl23II	CGTACG	2 cut(s)	823, 1201
PleI	GAGTC	3 cut(s)	127, 170, 2839
PluTI	GGCGCC	1 cut(s)	72
PpsI	GAGTC	3 cut(s)	127, 170, 2839
Ppu21I	YACGTR	1 cut(s)	2873
PpuMI	RGGWCCY	4 cut(s)	262, 1017, 1395, 2148
PscI	ACATGT	1 cut(s)	2109
PshAI	GACNNNNGTC	1 cut(s)	2110
PsiI	TTATAA	2 cut(s)	800, 1178
Psp5II	RGGWCCY	4 cut(s)	262, 1017, 1395, 2148
PspEI	GGTNACC	3 cut(s)	425, 809, 1187
PspLI	CGTACG	2 cut(s)	823, 1201
PspN4I	GGNNCC	9 cut(s)	70, 94, 263, 364, 647, 1018, 1396, 2149, 2150
PspPI	GGNCC	6 cut(s)	262, 308, 1017, 1395, 1921, 2148
PspPPI	RGGWCCY	4 cut(s)	262, 1017, 1395, 2148
PspXI	VCTCGAGB	1 cut(s)	2935
PstI	CTGCAG	2 cut(s)	928, 1306
PstNI	CAGNNNCTG	1 cut(s)	1880
PsuI	RGATCY	4 cut(s)	463, 520, 1703, 1951
PvuII	CAGCTG	4 cut(s)	617, 663, 971, 1349
RsaI	GTAC	9 cut(s)	156, 825, 1203, 1512, 1771, 1959, 1971, 2329, 2562
RsaNI	GTAC	9 cut(s)	155, 824, 1202, 1511, 1770, 1958, 1970, 2328, 2561
RseI	CAYNNNNRTG	2 cut(s)	2759, 2862
SapI	GCTCTTC	1 cut(s)	230
SaqAI	TTAA	7 cut(s)	126, 197, 1974, 2090, 2445, 2631, 2667
Sau96I	GGNCC	6 cut(s)	262, 308, 1017, 1395, 1921, 2148
SchI	GAGTC	3 cut(s)	128, 170, 2840
SfaNI	GCATC	8 cut(s)	127, 1538, 2138, 2158, 2290, 2401, 2915, 2999
SfcI	CTRYAG	6 cut(s)	28, 658, 924, 1302, 2001, 2725
SfoI	GGCGCC	1 cut(s)	70
Sfr274I	CTCGAG	1 cut(s)	2935
SinI	GGWCC	5 cut(s)	262, 1017, 1395, 1921, 2148
SlaI	CTCGAG	1 cut(s)	2935
SmiMI	CAYNNNNRTG	2 cut(s)	2759, 2862
SmlI	CTYRAG	3 cut(s)	1775, 1973, 2935
SmoI	CTYRAG	3 cut(s)	1775, 1973, 2935
SseBI	AGGCCT	1 cut(s)	2458
SspDI	GGCGCC	1 cut(s)	68
SspMI	CTAG	5 cut(s)	444, 524, 1463, 2393, 2814
StuI	AGGCCT	1 cut(s)	2458
StyI	CCWWGG	2 cut(s)	430, 1678
TaiI	ACGT	2 cut(s)	516, 2875
TaqI	TCGA	4 cut(s)	135, 2125, 2783, 2936
TatI	WGTACW	2 cut(s)	1969, 2327
TauI	GCSGC	1 cut(s)	69
TfiI	GAWTC	6 cut(s)	905, 1283, 1444, 1658, 2686, 2839
Tru1I	TTAA	7 cut(s)	126, 197, 1974, 2090, 2445, 2631, 2667
Tru9I	TTAA	7 cut(s)	126, 197, 1974, 2090, 2445, 2631, 2667
TscAI	CASTG	3 cut(s)	196, 1759, 1933
TspGWI	ACGGA	1 cut(s)	2959
TspRI	CASTG	3 cut(s)	196, 1759, 1933
Vha464I	CTTAAG	1 cut(s)	1973
VpaK11BI	GGWCC	5 cut(s)	262, 1017, 1395, 1921, 2148
XbaI	TCTAGA	1 cut(s)	523
XceI	RCATGY	2 cut(s)	2113, 2747
XhoI	CTCGAG	1 cut(s)	2935
XmiI	GTMKAC	1 cut(s)	2736
XmnI	GAANNNNTTC	2 cut(s)	1029, 1407
XspI	CTAG	5 cut(s)	444, 524, 1463, 2393, 2814
Zsp2I	ATGCAT	2 cut(s)	2030, 2216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.