Sel1-like repeats.
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0088761 RchiOBHm_Chr2g0088921 RchiOBHm_Chr3g0491871 RchiOBHm_Chr4g0406881 RchiOBHm_Chr5g0066691 RchiOBHm_Chr7g0205611 |
| rosa_laevigata | RLG00000033514 |
| rosa_multiflora | Rmu_sc0005659.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00021110 Rroxscaffold_2G00116730 Rroxscaffold_2G00116900 Rroxscaffold_6G00395530 Rroxscaffold_7G00187800 |
| rosa_rugosa | Rorug03G0261400 Rorug03G0261500 Rorug05G0117700 |
| rosa_samantha | Rh3AG300300 Rh3DG311900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 206 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 69 |
| AccBSI | CCGCTC | 1 cut(s) | 358 |
| AciI | CCGC | 2 cut(s) | 210, 358 |
| AfaI | GTAC | 1 cut(s) | 92 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 69 |
| AgsI | TTSAA | 3 cut(s) | 239, 248, 279 |
| AjnI | CCWGG | 1 cut(s) | 336 |
| AluBI | AGCT | 1 cut(s) | 58 |
| AluI | AGCT | 1 cut(s) | 58 |
| Alw26I | GTCTC | 4 cut(s) | 121, 163, 231, 327 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 130, 260 |
| ApeKI | GCWGC | 1 cut(s) | 371 |
| BanI | GGYRCC | 1 cut(s) | 206 |
| BbvI | GCAGC | 1 cut(s) | 358 |
| BciT130I | CCWGG | 1 cut(s) | 338 |
| BcoDI | GTCTC | 4 cut(s) | 121, 163, 231, 327 |
| BfaI | CTAG | 2 cut(s) | 87, 137 |
| BfmI | CTRYAG | 1 cut(s) | 213 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 302 |
| BisI | GCNGC | 2 cut(s) | 210, 372 |
| BlsI | GCNGC | 2 cut(s) | 211, 373 |
| Bme1390I | CCNGG | 1 cut(s) | 338 |
| BmiI | GGNNCC | 1 cut(s) | 208 |
| BmrFI | CCNGG | 1 cut(s) | 338 |
| BmsI | GCATC | 3 cut(s) | 92, 194, 442 |
| BsaI | GGTCTC | 2 cut(s) | 231, 327 |
| BsaJI | CCNNGG | 1 cut(s) | 469 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 69 |
| Bse3DI | GCAATG | 2 cut(s) | 78, 459 |
| BseBI | CCWGG | 1 cut(s) | 338 |
| BseDI | CCNNGG | 1 cut(s) | 469 |
| BseGI | GGATG | 1 cut(s) | 389 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BseMI | GCAATG | 2 cut(s) | 78, 459 |
| BseXI | GCAGC | 1 cut(s) | 358 |
| BshNI | GGYRCC | 1 cut(s) | 206 |
| BslFI | GGGAC | 2 cut(s) | 210, 236 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 69 |
| BsmAI | GTCTC | 4 cut(s) | 121, 163, 231, 327 |
| BsmFI | GGGAC | 2 cut(s) | 210, 236 |
| BsmI | GAATGC | 1 cut(s) | 319 |
| Bso31I | GGTCTC | 2 cut(s) | 231, 327 |
| Bsp143I | GATC | 2 cut(s) | 48, 388 |
| BspACI | CCGC | 2 cut(s) | 210, 358 |
| BspLI | GGNNCC | 1 cut(s) | 208 |
| BspT107I | GGYRCC | 1 cut(s) | 206 |
| BspTNI | GGTCTC | 2 cut(s) | 231, 327 |
| BsrBI | CCGCTC | 1 cut(s) | 358 |
| BsrDI | GCAATG | 2 cut(s) | 78, 459 |
| BssECI | CCNNGG | 1 cut(s) | 469 |
| BssMI | GATC | 2 cut(s) | 48, 388 |
| BssT1I | CCWWGG | 1 cut(s) | 469 |
| Bst2UI | CCWGG | 1 cut(s) | 338 |
| Bst4CI | ACNGT | 1 cut(s) | 132 |
| Bst6I | CTCTTC | 2 cut(s) | 234, 420 |
| BstDEI | CTNAG | 1 cut(s) | 19 |
| BstF5I | GGATG | 1 cut(s) | 389 |
| BstKTI | GATC | 2 cut(s) | 51, 391 |
| BstMAI | GTCTC | 4 cut(s) | 121, 163, 231, 327 |
| BstMBI | GATC | 2 cut(s) | 48, 388 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 209, 215, 302, 347, 377 |
| BstNI | CCWGG | 1 cut(s) | 338 |
| BstNSI | RCATGY | 1 cut(s) | 203 |
| BstSCI | CCNGG | 1 cut(s) | 336 |
| BstSFI | CTRYAG | 1 cut(s) | 213 |
| BstV1I | GCAGC | 1 cut(s) | 358 |
| BtsCI | GGATG | 1 cut(s) | 389 |
| CaiI | CAGNNNCTG | 2 cut(s) | 130, 260 |
| Csp6I | GTAC | 1 cut(s) | 91 |
| CviAII | CATG | 1 cut(s) | 200 |
| CviJI | RGCY | 3 cut(s) | 58, 296, 324 |
| CviKI_1 | RGCY | 3 cut(s) | 58, 296, 324 |
| CviQI | GTAC | 1 cut(s) | 91 |
| DdeI | CTNAG | 1 cut(s) | 19 |
| DpnI | GATC | 2 cut(s) | 50, 390 |
| DpnII | GATC | 2 cut(s) | 48, 388 |
| Eam1104I | CTCTTC | 2 cut(s) | 234, 420 |
| EarI | CTCTTC | 2 cut(s) | 234, 420 |
| Eco130I | CCWWGG | 1 cut(s) | 469 |
| Eco31I | GGTCTC | 2 cut(s) | 231, 327 |
| EcoRII | CCWGG | 1 cut(s) | 336 |
| EcoT14I | CCWWGG | 1 cut(s) | 469 |
| ErhI | CCWWGG | 1 cut(s) | 469 |
| FaeI | CATG | 1 cut(s) | 203 |
| FaiI | YATR | 7 cut(s) | 38, 169, 180, 201, 215, 220, 222 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 274, 306 |
| FaqI | GGGAC | 2 cut(s) | 210, 236 |
| FatI | CATG | 1 cut(s) | 199 |
| FauNDI | CATATG | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 2 cut(s) | 210, 372 |
| FokI | GGATG | 1 cut(s) | 396 |
| Fsp4HI | GCNGC | 2 cut(s) | 210, 372 |
| FspBI | CTAG | 2 cut(s) | 87, 137 |
| GluI | GCNGC | 2 cut(s) | 210, 372 |
| Hin1II | CATG | 1 cut(s) | 203 |
| HindIII | AAGCTT | 1 cut(s) | 56 |
| HinfI | GANTC | 2 cut(s) | 156, 257 |
| Hpy188I | TCNGA | 6 cut(s) | 48, 121, 155, 163, 190, 366 |
| Hpy188III | TCNNGA | 1 cut(s) | 137 |
| Hpy99I | CGWCG | 1 cut(s) | 17 |
| HpyAV | CCTTC | 4 cut(s) | 68, 111, 187, 475 |
| HpyCH4III | ACNGT | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 4 cut(s) | 83, 317, 374, 452 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 209, 215, 302, 347, 377 |
| HpyF3I | CTNAG | 1 cut(s) | 19 |
| Hsp92II | CATG | 1 cut(s) | 203 |
| Kzo9I | GATC | 2 cut(s) | 48, 388 |
| Lsp1109I | GCAGC | 1 cut(s) | 358 |
| LweI | GCATC | 3 cut(s) | 92, 194, 442 |
| MaeI | CTAG | 2 cut(s) | 87, 137 |
| MalI | GATC | 2 cut(s) | 50, 390 |
| MbiI | CCGCTC | 1 cut(s) | 358 |
| MboI | GATC | 2 cut(s) | 48, 388 |
| MboII | GAAGA | 4 cut(s) | 221, 224, 227, 437 |
| MlyI | GAGTC | 1 cut(s) | 165 |
| MmeI | TCCRAC | 1 cut(s) | 387 |
| MnlI | CCTC | 3 cut(s) | 161, 415, 467 |
| MseI | TTAA | 2 cut(s) | 399, 490 |
| MslI | CAYNNNNRTG | 1 cut(s) | 204 |
| MspR9I | CCNGG | 1 cut(s) | 338 |
| Mva1269I | GAATGC | 1 cut(s) | 319 |
| MvaI | CCWGG | 1 cut(s) | 338 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 209, 215, 302, 347, 377 |
| NdeI | CATATG | 1 cut(s) | 220 |
| NdeII | GATC | 2 cut(s) | 48, 388 |
| NlaIII | CATG | 1 cut(s) | 203 |
| NlaIV | GGNNCC | 1 cut(s) | 208 |
| NspI | RCATGY | 1 cut(s) | 203 |
| PctI | GAATGC | 1 cut(s) | 319 |
| PfeI | GAWTC | 1 cut(s) | 257 |
| PflFI | GACNNNGTC | 1 cut(s) | 132 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 69 |
| PkrI | GCNGC | 2 cut(s) | 211, 373 |
| PleI | GAGTC | 1 cut(s) | 164 |
| PpsI | GAGTC | 1 cut(s) | 164 |
| Psp6I | CCWGG | 1 cut(s) | 336 |
| PspGI | CCWGG | 1 cut(s) | 336 |
| PspN4I | GGNNCC | 1 cut(s) | 208 |
| PstNI | CAGNNNCTG | 2 cut(s) | 130, 260 |
| PsyI | GACNNNGTC | 1 cut(s) | 132 |
| RsaI | GTAC | 1 cut(s) | 92 |
| RsaNI | GTAC | 1 cut(s) | 91 |
| RseI | CAYNNNNRTG | 1 cut(s) | 204 |
| SaqAI | TTAA | 2 cut(s) | 399, 490 |
| SatI | GCNGC | 2 cut(s) | 210, 372 |
| Sau3AI | GATC | 2 cut(s) | 48, 388 |
| SchI | GAGTC | 1 cut(s) | 165 |
| ScrFI | CCNGG | 1 cut(s) | 338 |
| SetI | ASST | 5 cut(s) | 60, 92, 103, 244, 486 |
| SfaNI | GCATC | 3 cut(s) | 92, 194, 442 |
| SfcI | CTRYAG | 1 cut(s) | 213 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 204 |
| SsiI | CCGC | 2 cut(s) | 210, 358 |
| SspMI | CTAG | 2 cut(s) | 87, 137 |
| StyD4I | CCNGG | 1 cut(s) | 336 |
| StyI | CCWWGG | 1 cut(s) | 469 |
| TaaI | ACNGT | 1 cut(s) | 132 |
| TauI | GCSGC | 1 cut(s) | 212 |
| TfiI | GAWTC | 1 cut(s) | 257 |
| Tru1I | TTAA | 2 cut(s) | 399, 490 |
| Tru9I | TTAA | 2 cut(s) | 399, 490 |
| TseI | GCWGC | 1 cut(s) | 371 |
| TspDTI | ATGAA | 3 cut(s) | 17, 47, 281 |
| Tth111I | GACNNNGTC | 1 cut(s) | 132 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 69 |
| XbaI | TCTAGA | 1 cut(s) | 136 |
| XceI | RCATGY | 1 cut(s) | 203 |
| XspI | CTAG | 2 cut(s) | 87, 137 |