Sel1-like repeats.
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0088761 RchiOBHm_Chr2g0088921 RchiOBHm_Chr3g0491871 RchiOBHm_Chr4g0406881 RchiOBHm_Chr5g0066691 RchiOBHm_Chr7g0205611 |
| rosa_laevigata | RLG00000033514 |
| rosa_multiflora | Rmu_sc0005659.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00021110 Rroxscaffold_2G00116730 Rroxscaffold_2G00116900 Rroxscaffold_6G00395530 Rroxscaffold_7G00187800 |
| rosa_rugosa | Rorug03G0261400 Rorug03G0261500 Rorug05G0117700 |
| rosa_samantha | Rh3AG300300 Rh3DG311900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 94 |
| AciI | CCGC | 1 cut(s) | 94 |
| AjnI | CCWGG | 2 cut(s) | 72, 115 |
| Alw26I | GTCTC | 1 cut(s) | 63 |
| AsuII | TTCGAA | 1 cut(s) | 14 |
| BciT130I | CCWGG | 2 cut(s) | 74, 117 |
| BcoDI | GTCTC | 1 cut(s) | 63 |
| Bme1390I | CCNGG | 2 cut(s) | 74, 117 |
| BmrFI | CCNGG | 2 cut(s) | 74, 117 |
| Bpu14I | TTCGAA | 1 cut(s) | 14 |
| BsaI | GGTCTC | 1 cut(s) | 63 |
| BseBI | CCWGG | 2 cut(s) | 74, 117 |
| BseGI | GGATG | 1 cut(s) | 125 |
| BsmAI | GTCTC | 1 cut(s) | 63 |
| BsmI | GAATGC | 1 cut(s) | 55 |
| Bso31I | GGTCTC | 1 cut(s) | 63 |
| Bsp119I | TTCGAA | 1 cut(s) | 14 |
| Bsp143I | GATC | 2 cut(s) | 102, 124 |
| BspACI | CCGC | 1 cut(s) | 94 |
| BspT104I | TTCGAA | 1 cut(s) | 14 |
| BspTNI | GGTCTC | 1 cut(s) | 63 |
| BsrBI | CCGCTC | 1 cut(s) | 94 |
| BssMI | GATC | 2 cut(s) | 102, 124 |
| Bst2UI | CCWGG | 2 cut(s) | 74, 117 |
| BstBI | TTCGAA | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 125 |
| BstKTI | GATC | 2 cut(s) | 105, 127 |
| BstMAI | GTCTC | 1 cut(s) | 63 |
| BstMBI | GATC | 2 cut(s) | 102, 124 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 38, 83 |
| BstNI | CCWGG | 2 cut(s) | 74, 117 |
| BstSCI | CCNGG | 2 cut(s) | 72, 115 |
| BtsCI | GGATG | 1 cut(s) | 125 |
| BtsI | GCAGTG | 1 cut(s) | 105 |
| BtsIMutI | CAGTG | 1 cut(s) | 105 |
| DpnI | GATC | 2 cut(s) | 104, 126 |
| DpnII | GATC | 2 cut(s) | 102, 124 |
| Eco31I | GGTCTC | 1 cut(s) | 63 |
| EcoRII | CCWGG | 2 cut(s) | 72, 115 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 10, 42 |
| FokI | GGATG | 1 cut(s) | 132 |
| Hpy188I | TCNGA | 1 cut(s) | 102 |
| HpyCH4V | TGCA | 2 cut(s) | 53, 110 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 38, 83 |
| Kzo9I | GATC | 2 cut(s) | 102, 124 |
| LpnPI | CCDG | 5 cut(s) | 59, 63, 86, 102, 129 |
| MalI | GATC | 2 cut(s) | 104, 126 |
| MbiI | CCGCTC | 1 cut(s) | 94 |
| MboI | GATC | 2 cut(s) | 102, 124 |
| MboII | GAAGA | 1 cut(s) | 173 |
| MluCI | AATT | 1 cut(s) | 166 |
| MmeI | TCCRAC | 1 cut(s) | 123 |
| MnlI | CCTC | 1 cut(s) | 151 |
| MspR9I | CCNGG | 2 cut(s) | 74, 117 |
| Mva1269I | GAATGC | 1 cut(s) | 55 |
| MvaI | CCWGG | 2 cut(s) | 74, 117 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 38, 83 |
| NdeII | GATC | 2 cut(s) | 102, 124 |
| NspV | TTCGAA | 1 cut(s) | 14 |
| PctI | GAATGC | 1 cut(s) | 55 |
| Psp6I | CCWGG | 2 cut(s) | 72, 115 |
| PspGI | CCWGG | 2 cut(s) | 72, 115 |
| Sau3AI | GATC | 2 cut(s) | 102, 124 |
| ScrFI | CCNGG | 2 cut(s) | 74, 117 |
| SfuI | TTCGAA | 1 cut(s) | 14 |
| Sse9I | AATT | 1 cut(s) | 166 |
| SsiI | CCGC | 1 cut(s) | 94 |
| StyD4I | CCNGG | 2 cut(s) | 72, 115 |
| TaqI | TCGA | 1 cut(s) | 14 |
| TasI | AATT | 1 cut(s) | 166 |
| TscAI | CASTG | 1 cut(s) | 112 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 112 |