Sel1-like repeats.
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0088761 RchiOBHm_Chr2g0088921 RchiOBHm_Chr3g0491871 RchiOBHm_Chr4g0406881 RchiOBHm_Chr5g0066691 RchiOBHm_Chr7g0205611 |
| rosa_laevigata | RLG00000033514 |
| rosa_multiflora | Rmu_sc0005659.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00021110 Rroxscaffold_2G00116730 Rroxscaffold_2G00116900 Rroxscaffold_6G00395530 Rroxscaffold_7G00187800 |
| rosa_rugosa | Rorug03G0261400 Rorug03G0261500 Rorug05G0117700 |
| rosa_samantha | Rh3AG300300 Rh3DG311900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 7, 307 |
| AciI | CCGC | 4 cut(s) | 7, 77, 307, 321 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 173, 174 |
| AflIII | ACRYGT | 1 cut(s) | 143 |
| AjnI | CCWGG | 1 cut(s) | 285 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 148, 180 |
| AluBI | AGCT | 2 cut(s) | 172, 245 |
| AluI | AGCT | 2 cut(s) | 172, 245 |
| Alw26I | GTCTC | 2 cut(s) | 130, 276 |
| Ama87I | CYCGRG | 1 cut(s) | 167 |
| AoxI | GGCC | 1 cut(s) | 87 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 273 |
| AsuHPI | GGTGA | 2 cut(s) | 46, 310 |
| AsuII | TTCGAA | 1 cut(s) | 227 |
| AvaI | CYCGRG | 1 cut(s) | 167 |
| BciT130I | CCWGG | 1 cut(s) | 287 |
| BcoDI | GTCTC | 2 cut(s) | 130, 276 |
| BfaI | CTAG | 1 cut(s) | 246 |
| Bme1390I | CCNGG | 1 cut(s) | 287 |
| BmeT110I | CYCGRG | 1 cut(s) | 167 |
| BmiI | GGNNCC | 1 cut(s) | 130 |
| BmrFI | CCNGG | 1 cut(s) | 287 |
| Bpu14I | TTCGAA | 1 cut(s) | 227 |
| BpuEI | CTTGAG | 1 cut(s) | 154 |
| BsaI | GGTCTC | 1 cut(s) | 276 |
| BsaJI | CCNNGG | 1 cut(s) | 90 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 104, 134, 148, 178 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 173, 174 |
| BseBI | CCWGG | 1 cut(s) | 287 |
| BseDI | CCNNGG | 1 cut(s) | 90 |
| BseGI | GGATG | 2 cut(s) | 67, 338 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 173, 174 |
| BshFI | GGCC | 1 cut(s) | 89 |
| BsiHKCI | CYCGRG | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 173, 174 |
| BsmAI | GTCTC | 2 cut(s) | 130, 276 |
| BsmI | GAATGC | 2 cut(s) | 268, 273 |
| BsnI | GGCC | 1 cut(s) | 89 |
| Bso31I | GGTCTC | 1 cut(s) | 276 |
| BsoBI | CYCGRG | 1 cut(s) | 167 |
| Bsp119I | TTCGAA | 1 cut(s) | 227 |
| Bsp143I | GATC | 2 cut(s) | 315, 337 |
| BspACI | CCGC | 4 cut(s) | 7, 77, 307, 321 |
| BspANI | GGCC | 1 cut(s) | 89 |
| BspLI | GGNNCC | 1 cut(s) | 130 |
| BspT104I | TTCGAA | 1 cut(s) | 227 |
| BspTNI | GGTCTC | 1 cut(s) | 276 |
| BsrBI | CCGCTC | 2 cut(s) | 7, 307 |
| BssECI | CCNNGG | 1 cut(s) | 90 |
| BssMI | GATC | 2 cut(s) | 315, 337 |
| Bst2UI | CCWGG | 1 cut(s) | 287 |
| Bst4CI | ACNGT | 1 cut(s) | 160 |
| Bst6I | CTCTTC | 1 cut(s) | 369 |
| BstBI | TTCGAA | 1 cut(s) | 227 |
| BstDEI | CTNAG | 2 cut(s) | 84, 278 |
| BstF5I | GGATG | 2 cut(s) | 67, 338 |
| BstKTI | GATC | 2 cut(s) | 318, 340 |
| BstMAI | GTCTC | 2 cut(s) | 130, 276 |
| BstMBI | GATC | 2 cut(s) | 315, 337 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 296 |
| BstNI | CCWGG | 1 cut(s) | 287 |
| BstNSI | RCATGY | 1 cut(s) | 147 |
| BstSCI | CCNGG | 1 cut(s) | 285 |
| BsuRI | GGCC | 1 cut(s) | 89 |
| BtsCI | GGATG | 2 cut(s) | 67, 338 |
| CviAII | CATG | 2 cut(s) | 73, 144 |
| CviJI | RGCY | 3 cut(s) | 89, 172, 245 |
| CviKI_1 | RGCY | 3 cut(s) | 89, 172, 245 |
| DdeI | CTNAG | 2 cut(s) | 84, 278 |
| DpnI | GATC | 2 cut(s) | 317, 339 |
| DpnII | GATC | 2 cut(s) | 315, 337 |
| Eam1104I | CTCTTC | 1 cut(s) | 369 |
| EarI | CTCTTC | 1 cut(s) | 369 |
| EciI | GGCGGA | 1 cut(s) | 92 |
| Eco31I | GGTCTC | 1 cut(s) | 276 |
| Eco88I | CYCGRG | 1 cut(s) | 167 |
| EcoRII | CCWGG | 1 cut(s) | 285 |
| FaeI | CATG | 2 cut(s) | 76, 147 |
| FaiI | YATR | 6 cut(s) | 19, 21, 54, 74, 119, 145 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 223, 255 |
| FatI | CATG | 2 cut(s) | 72, 143 |
| FokI | GGATG | 2 cut(s) | 74, 345 |
| FspBI | CTAG | 1 cut(s) | 246 |
| HaeIII | GGCC | 1 cut(s) | 89 |
| Hin1II | CATG | 2 cut(s) | 76, 147 |
| HincII | GTYRAC | 1 cut(s) | 187 |
| HindII | GTYRAC | 1 cut(s) | 187 |
| HinfI | GANTC | 4 cut(s) | 80, 196, 206, 379 |
| HpaI | GTTAAC | 1 cut(s) | 187 |
| HphI | GGTGA | 2 cut(s) | 46, 310 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 2 cut(s) | 155, 315 |
| Hpy188III | TCNNGA | 3 cut(s) | 126, 167, 203 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| HpyCH4III | ACNGT | 1 cut(s) | 160 |
| HpyCH4V | TGCA | 3 cut(s) | 14, 193, 266 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 296 |
| HpyF3I | CTNAG | 2 cut(s) | 84, 278 |
| Hsp92II | CATG | 2 cut(s) | 76, 147 |
| KspAI | GTTAAC | 1 cut(s) | 187 |
| Kzo9I | GATC | 2 cut(s) | 315, 337 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 3 cut(s) | 272, 299, 315 |
| MaeI | CTAG | 1 cut(s) | 246 |
| MaeIII | GTNAC | 1 cut(s) | 34 |
| MalI | GATC | 2 cut(s) | 317, 339 |
| MbiI | CCGCTC | 2 cut(s) | 7, 307 |
| MboI | GATC | 2 cut(s) | 315, 337 |
| MboII | GAAGA | 3 cut(s) | 191, 267, 386 |
| MlyI | GAGTC | 1 cut(s) | 89 |
| MnlI | CCTC | 3 cut(s) | 85, 174, 364 |
| MroXI | GAANNNNTTC | 1 cut(s) | 273 |
| MseI | TTAA | 1 cut(s) | 186 |
| MspR9I | CCNGG | 1 cut(s) | 287 |
| Mva1269I | GAATGC | 2 cut(s) | 268, 273 |
| MvaI | CCWGG | 1 cut(s) | 287 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 296 |
| NdeII | GATC | 2 cut(s) | 315, 337 |
| NlaIII | CATG | 2 cut(s) | 76, 147 |
| NlaIV | GGNNCC | 1 cut(s) | 130 |
| NmeAIII | GCCGAG | 1 cut(s) | 115 |
| NmuCI | GTSAC | 1 cut(s) | 34 |
| NspI | RCATGY | 1 cut(s) | 147 |
| NspV | TTCGAA | 1 cut(s) | 227 |
| PciI | ACATGT | 1 cut(s) | 143 |
| PctI | GAATGC | 2 cut(s) | 268, 273 |
| PdmI | GAANNNNTTC | 1 cut(s) | 273 |
| PfeI | GAWTC | 3 cut(s) | 196, 206, 379 |
| PleI | GAGTC | 1 cut(s) | 88 |
| PpsI | GAGTC | 1 cut(s) | 88 |
| PscI | ACATGT | 1 cut(s) | 143 |
| Psp6I | CCWGG | 1 cut(s) | 285 |
| PspGI | CCWGG | 1 cut(s) | 285 |
| PspN4I | GGNNCC | 1 cut(s) | 130 |
| SaqAI | TTAA | 1 cut(s) | 186 |
| Sau3AI | GATC | 2 cut(s) | 315, 337 |
| SchI | GAGTC | 1 cut(s) | 89 |
| ScrFI | CCNGG | 1 cut(s) | 287 |
| SetI | ASST | 3 cut(s) | 134, 174, 247 |
| SfuI | TTCGAA | 1 cut(s) | 227 |
| SmlI | CTYRAG | 1 cut(s) | 133 |
| SmoI | CTYRAG | 1 cut(s) | 133 |
| SsiI | CCGC | 4 cut(s) | 7, 77, 307, 321 |
| SspMI | CTAG | 1 cut(s) | 246 |
| StyD4I | CCNGG | 1 cut(s) | 285 |
| TaaI | ACNGT | 1 cut(s) | 160 |
| TaqI | TCGA | 1 cut(s) | 227 |
| TfiI | GAWTC | 3 cut(s) | 196, 206, 379 |
| Tru1I | TTAA | 1 cut(s) | 186 |
| Tru9I | TTAA | 1 cut(s) | 186 |
| TseFI | GTSAC | 1 cut(s) | 34 |
| Tsp45I | GTSAC | 1 cut(s) | 34 |
| TspDTI | ATGAA | 3 cut(s) | 78, 120, 230 |
| XceI | RCATGY | 1 cut(s) | 147 |
| XmnI | GAANNNNTTC | 1 cut(s) | 273 |
| XspI | CTAG | 1 cut(s) | 246 |