Sel1-like repeats.
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0088761 RchiOBHm_Chr2g0088921 RchiOBHm_Chr3g0491871 RchiOBHm_Chr4g0406881 RchiOBHm_Chr5g0066691 RchiOBHm_Chr7g0205611 |
| rosa_laevigata | RLG00000033514 |
| rosa_multiflora | Rmu_sc0005659.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00021110 Rroxscaffold_2G00116730 Rroxscaffold_2G00116900 Rroxscaffold_6G00395530 Rroxscaffold_7G00187800 |
| rosa_rugosa | Rorug03G0261400 Rorug03G0261500 Rorug05G0117700 |
| rosa_samantha | Rh3AG300300 Rh3DG311900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 301 |
| Acc36I | ACCTGC | 1 cut(s) | 301 |
| AccBSI | CCGCTC | 1 cut(s) | 287 |
| AciI | CCGC | 3 cut(s) | 39, 57, 285 |
| AcoI | YGGCCR | 1 cut(s) | 88 |
| AfaI | GTAC | 1 cut(s) | 236 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 93 |
| AgsI | TTSAA | 5 cut(s) | 70, 187, 269, 329, 361 |
| AjnI | CCWGG | 1 cut(s) | 417 |
| AluBI | AGCT | 1 cut(s) | 272 |
| AluI | AGCT | 1 cut(s) | 272 |
| Alw26I | GTCTC | 1 cut(s) | 408 |
| AoxI | GGCC | 1 cut(s) | 88 |
| ApeKI | GCWGC | 2 cut(s) | 14, 452 |
| AsuHPI | GGTGA | 2 cut(s) | 122, 262 |
| BbsI | GAAGAC | 1 cut(s) | 77 |
| BbvI | GCAGC | 1 cut(s) | 439 |
| BccI | CCATC | 1 cut(s) | 241 |
| BciT130I | CCWGG | 1 cut(s) | 419 |
| BclI | TGATCA | 1 cut(s) | 210 |
| BcoDI | GTCTC | 1 cut(s) | 408 |
| BfuAI | ACCTGC | 1 cut(s) | 301 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 383 |
| BisI | GCNGC | 4 cut(s) | 15, 40, 285, 453 |
| BlsI | GCNGC | 4 cut(s) | 16, 41, 286, 454 |
| Bme1390I | CCNGG | 1 cut(s) | 419 |
| BmrFI | CCNGG | 1 cut(s) | 419 |
| BmsI | GCATC | 1 cut(s) | 103 |
| BpiI | GAAGAC | 1 cut(s) | 77 |
| BsaI | GGTCTC | 1 cut(s) | 408 |
| BsaJI | CCNNGG | 2 cut(s) | 60, 91 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 271, 301 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 93 |
| BseBI | CCWGG | 1 cut(s) | 419 |
| BseDI | CCNNGG | 2 cut(s) | 60, 91 |
| BseGI | GGATG | 3 cut(s) | 159, 178, 470 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 93 |
| BseX3I | CGGCCG | 1 cut(s) | 88 |
| BseXI | GCAGC | 1 cut(s) | 439 |
| BsgI | GTGCAG | 1 cut(s) | 279 |
| Bsh1285I | CGRYCG | 1 cut(s) | 91 |
| BshFI | GGCC | 1 cut(s) | 90 |
| BsiEI | CGRYCG | 1 cut(s) | 91 |
| BsiSI | CCGG | 1 cut(s) | 87 |
| BslFI | GGGAC | 2 cut(s) | 109, 317 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 93 |
| BsmAI | GTCTC | 1 cut(s) | 408 |
| BsmFI | GGGAC | 2 cut(s) | 109, 317 |
| BsmI | GAATGC | 1 cut(s) | 400 |
| BsnI | GGCC | 1 cut(s) | 90 |
| Bso31I | GGTCTC | 1 cut(s) | 408 |
| Bsp143I | GATC | 3 cut(s) | 145, 210, 469 |
| BspACI | CCGC | 3 cut(s) | 39, 57, 285 |
| BspANI | GGCC | 1 cut(s) | 90 |
| BspMI | ACCTGC | 1 cut(s) | 301 |
| BspTNI | GGTCTC | 1 cut(s) | 408 |
| BsrBI | CCGCTC | 1 cut(s) | 287 |
| BssECI | CCNNGG | 2 cut(s) | 60, 91 |
| BssMI | GATC | 3 cut(s) | 145, 210, 469 |
| BssT1I | CCWWGG | 1 cut(s) | 60 |
| Bst2UI | CCWGG | 1 cut(s) | 419 |
| Bst4CI | ACNGT | 1 cut(s) | 31 |
| BstF5I | GGATG | 3 cut(s) | 159, 178, 470 |
| BstKTI | GATC | 3 cut(s) | 148, 213, 472 |
| BstMAI | GTCTC | 1 cut(s) | 408 |
| BstMBI | GATC | 3 cut(s) | 145, 210, 469 |
| BstMCI | CGRYCG | 1 cut(s) | 91 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 293, 383, 428, 458 |
| BstNI | CCWGG | 1 cut(s) | 419 |
| BstSCI | CCNGG | 1 cut(s) | 417 |
| BstV1I | GCAGC | 1 cut(s) | 439 |
| BstV2I | GAAGAC | 1 cut(s) | 77 |
| BstZI | CGGCCG | 1 cut(s) | 88 |
| BsuRI | GGCC | 1 cut(s) | 90 |
| BtsCI | GGATG | 3 cut(s) | 159, 178, 470 |
| BtsIMutI | CAGTG | 1 cut(s) | 27 |
| BveI | ACCTGC | 1 cut(s) | 301 |
| Csp6I | GTAC | 1 cut(s) | 235 |
| CviJI | RGCY | 5 cut(s) | 90, 272, 284, 315, 377 |
| CviKI_1 | RGCY | 5 cut(s) | 90, 272, 284, 315, 377 |
| CviQI | GTAC | 1 cut(s) | 235 |
| DpnI | GATC | 3 cut(s) | 147, 212, 471 |
| DpnII | GATC | 3 cut(s) | 145, 210, 469 |
| DraI | TTTAAA | 1 cut(s) | 310 |
| EaeI | YGGCCR | 1 cut(s) | 88 |
| EagI | CGGCCG | 1 cut(s) | 88 |
| EciI | GGCGGA | 1 cut(s) | 46 |
| EclXI | CGGCCG | 1 cut(s) | 88 |
| Eco130I | CCWWGG | 1 cut(s) | 60 |
| Eco31I | GGTCTC | 1 cut(s) | 408 |
| Eco52I | CGGCCG | 1 cut(s) | 88 |
| EcoRII | CCWGG | 1 cut(s) | 417 |
| EcoT14I | CCWWGG | 1 cut(s) | 60 |
| ErhI | CCWWGG | 1 cut(s) | 60 |
| FaiI | YATR | 3 cut(s) | 19, 222, 275 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 355, 387 |
| FaqI | GGGAC | 2 cut(s) | 109, 317 |
| FbaI | TGATCA | 1 cut(s) | 210 |
| Fnu4HI | GCNGC | 4 cut(s) | 15, 40, 285, 453 |
| FokI | GGATG | 3 cut(s) | 166, 185, 477 |
| Fsp4HI | GCNGC | 4 cut(s) | 15, 40, 285, 453 |
| GluI | GCNGC | 4 cut(s) | 15, 40, 285, 453 |
| HaeIII | GGCC | 1 cut(s) | 90 |
| HapII | CCGG | 1 cut(s) | 87 |
| HpaII | CCGG | 1 cut(s) | 87 |
| HphI | GGTGA | 2 cut(s) | 122, 262 |
| Hpy188I | TCNGA | 2 cut(s) | 228, 447 |
| Hpy188III | TCNNGA | 1 cut(s) | 242 |
| HpyAV | CCTTC | 2 cut(s) | 163, 384 |
| HpyCH4III | ACNGT | 1 cut(s) | 31 |
| HpyCH4V | TGCA | 4 cut(s) | 17, 296, 398, 455 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 293, 383, 428, 458 |
| Ksp22I | TGATCA | 1 cut(s) | 210 |
| Kzo9I | GATC | 3 cut(s) | 145, 210, 469 |
| LmnI | GCTCC | 1 cut(s) | 292 |
| LpnPI | CCDG | 9 cut(s) | 100, 136, 138, 306, 391, 404, 408, 431, 447 |
| Lsp1109I | GCAGC | 1 cut(s) | 439 |
| LweI | GCATC | 1 cut(s) | 103 |
| MalI | GATC | 3 cut(s) | 147, 212, 471 |
| MbiI | CCGCTC | 1 cut(s) | 287 |
| MboI | GATC | 3 cut(s) | 145, 210, 469 |
| MboII | GAAGA | 1 cut(s) | 82 |
| MluCI | AATT | 1 cut(s) | 141 |
| MmeI | TCCRAC | 1 cut(s) | 138 |
| MnlI | CCTC | 6 cut(s) | 62, 86, 94, 101, 270, 326 |
| MseI | TTAA | 2 cut(s) | 140, 309 |
| MspI | CCGG | 1 cut(s) | 87 |
| MspR9I | CCNGG | 1 cut(s) | 419 |
| Mva1269I | GAATGC | 1 cut(s) | 400 |
| MvaI | CCWGG | 1 cut(s) | 419 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 293, 383, 428, 458 |
| NdeII | GATC | 3 cut(s) | 145, 210, 469 |
| NmeAIII | GCCGAG | 1 cut(s) | 116 |
| PaqCI | CACCTGC | 1 cut(s) | 301 |
| PctI | GAATGC | 1 cut(s) | 400 |
| PkrI | GCNGC | 4 cut(s) | 16, 41, 286, 454 |
| Psp6I | CCWGG | 1 cut(s) | 417 |
| PspGI | CCWGG | 1 cut(s) | 417 |
| RsaI | GTAC | 1 cut(s) | 236 |
| RsaNI | GTAC | 1 cut(s) | 235 |
| SaqAI | TTAA | 2 cut(s) | 140, 309 |
| SatI | GCNGC | 4 cut(s) | 15, 40, 285, 453 |
| Sau3AI | GATC | 3 cut(s) | 145, 210, 469 |
| ScrFI | CCNGG | 1 cut(s) | 419 |
| SetI | ASST | 6 cut(s) | 9, 54, 112, 138, 274, 295 |
| SfaNI | GCATC | 1 cut(s) | 103 |
| Sse9I | AATT | 1 cut(s) | 141 |
| SsiI | CCGC | 3 cut(s) | 39, 57, 285 |
| StyD4I | CCNGG | 1 cut(s) | 417 |
| StyI | CCWWGG | 1 cut(s) | 60 |
| TaaI | ACNGT | 1 cut(s) | 31 |
| TaqI | TCGA | 2 cut(s) | 241, 261 |
| TasI | AATT | 1 cut(s) | 141 |
| TatI | WGTACW | 1 cut(s) | 234 |
| TauI | GCSGC | 2 cut(s) | 42, 287 |
| Tru1I | TTAA | 2 cut(s) | 140, 309 |
| Tru9I | TTAA | 2 cut(s) | 140, 309 |
| TscAI | CASTG | 1 cut(s) | 34 |
| TseI | GCWGC | 2 cut(s) | 14, 452 |
| TspDTI | ATGAA | 3 cut(s) | 17, 182, 362 |
| TspRI | CASTG | 1 cut(s) | 34 |