Sel1-like repeats.
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0088761 RchiOBHm_Chr2g0088921 RchiOBHm_Chr3g0491871 RchiOBHm_Chr4g0406881 RchiOBHm_Chr5g0066691 RchiOBHm_Chr7g0205611 |
| rosa_laevigata | RLG00000033514 |
| rosa_multiflora | Rmu_sc0005659.1_g000019 |
| rosa_roxburghii | Rroxscaffold_1G00021110 Rroxscaffold_2G00116730 Rroxscaffold_2G00116900 Rroxscaffold_6G00395530 Rroxscaffold_7G00187800 |
| rosa_rugosa | Rorug03G0261400 Rorug03G0261500 Rorug05G0117700 |
| rosa_samantha | Rh3AG300300 Rh3DG311900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 289 |
| AciI | CCGC | 1 cut(s) | 289 |
| AfaI | GTAC | 1 cut(s) | 42 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 145, 146 |
| AflIII | ACRYGT | 1 cut(s) | 117 |
| AgsI | TTSAA | 1 cut(s) | 179 |
| AjnI | CCWGG | 1 cut(s) | 267 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 120, 152 |
| AluBI | AGCT | 2 cut(s) | 144, 227 |
| AluI | AGCT | 2 cut(s) | 144, 227 |
| Alw26I | GTCTC | 2 cut(s) | 104, 258 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 171, 191 |
| Ama87I | CYCGRG | 1 cut(s) | 139 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 255 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuII | TTCGAA | 1 cut(s) | 209 |
| AvaI | CYCGRG | 1 cut(s) | 139 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BccI | CCATC | 1 cut(s) | 58 |
| BciT130I | CCWGG | 1 cut(s) | 269 |
| BcoDI | GTCTC | 2 cut(s) | 104, 258 |
| BfaI | CTAG | 1 cut(s) | 228 |
| BglII | AGATCT | 1 cut(s) | 10 |
| Bme1390I | CCNGG | 1 cut(s) | 269 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmeT110I | CYCGRG | 1 cut(s) | 139 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BmiI | GGNNCC | 1 cut(s) | 104 |
| BmrFI | CCNGG | 1 cut(s) | 269 |
| Bpu14I | TTCGAA | 1 cut(s) | 209 |
| BpuEI | CTTGAG | 1 cut(s) | 128 |
| BsaI | GGTCTC | 1 cut(s) | 258 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 79, 109, 120, 150 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 145, 146 |
| BseBI | CCWGG | 1 cut(s) | 269 |
| BseGI | GGATG | 1 cut(s) | 320 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 145, 146 |
| BsiHKCI | CYCGRG | 1 cut(s) | 139 |
| BslFI | GGGAC | 1 cut(s) | 167 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 145, 146 |
| BsmAI | GTCTC | 2 cut(s) | 104, 258 |
| BsmFI | GGGAC | 1 cut(s) | 167 |
| BsmI | GAATGC | 2 cut(s) | 250, 255 |
| Bso31I | GGTCTC | 1 cut(s) | 258 |
| BsoBI | CYCGRG | 1 cut(s) | 139 |
| Bsp119I | TTCGAA | 1 cut(s) | 209 |
| Bsp143I | GATC | 3 cut(s) | 10, 297, 319 |
| BspACI | CCGC | 1 cut(s) | 289 |
| BspLI | GGNNCC | 1 cut(s) | 104 |
| BspT104I | TTCGAA | 1 cut(s) | 209 |
| BspTNI | GGTCTC | 1 cut(s) | 258 |
| BsrBI | CCGCTC | 1 cut(s) | 289 |
| BssMI | GATC | 3 cut(s) | 10, 297, 319 |
| Bst2UI | CCWGG | 1 cut(s) | 269 |
| Bst4CI | ACNGT | 1 cut(s) | 132 |
| Bst6I | CTCTTC | 1 cut(s) | 351 |
| BstBI | TTCGAA | 1 cut(s) | 209 |
| BstDEI | CTNAG | 1 cut(s) | 260 |
| BstF5I | GGATG | 1 cut(s) | 320 |
| BstKTI | GATC | 3 cut(s) | 13, 300, 322 |
| BstMAI | GTCTC | 2 cut(s) | 104, 258 |
| BstMBI | GATC | 3 cut(s) | 10, 297, 319 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 278 |
| BstNI | CCWGG | 1 cut(s) | 269 |
| BstNSI | RCATGY | 1 cut(s) | 121 |
| BstSCI | CCNGG | 1 cut(s) | 267 |
| BstX2I | RGATCY | 1 cut(s) | 10 |
| BstYI | RGATCY | 1 cut(s) | 10 |
| BtsCI | GGATG | 1 cut(s) | 320 |
| BtsI | GCAGTG | 1 cut(s) | 300 |
| BtsIMutI | CAGTG | 1 cut(s) | 300 |
| CaiI | CAGNNNCTG | 2 cut(s) | 171, 191 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| Csp6I | GTAC | 1 cut(s) | 41 |
| CviAII | CATG | 2 cut(s) | 45, 118 |
| CviJI | RGCY | 2 cut(s) | 144, 227 |
| CviKI_1 | RGCY | 2 cut(s) | 144, 227 |
| CviQI | GTAC | 1 cut(s) | 41 |
| DdeI | CTNAG | 1 cut(s) | 260 |
| DpnI | GATC | 3 cut(s) | 12, 299, 321 |
| DpnII | GATC | 3 cut(s) | 10, 297, 319 |
| Eam1104I | CTCTTC | 1 cut(s) | 351 |
| EarI | CTCTTC | 1 cut(s) | 351 |
| Eco31I | GGTCTC | 1 cut(s) | 258 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| Eco88I | CYCGRG | 1 cut(s) | 139 |
| EcoRII | CCWGG | 1 cut(s) | 267 |
| FaeI | CATG | 2 cut(s) | 48, 121 |
| FaiI | YATR | 4 cut(s) | 46, 56, 94, 119 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 205, 237 |
| FaqI | GGGAC | 1 cut(s) | 167 |
| FatI | CATG | 2 cut(s) | 44, 117 |
| FokI | GGATG | 1 cut(s) | 327 |
| FspBI | CTAG | 1 cut(s) | 228 |
| Hin1II | CATG | 2 cut(s) | 48, 121 |
| HincII | GTYRAC | 1 cut(s) | 159 |
| HindII | GTYRAC | 1 cut(s) | 159 |
| HinfI | GANTC | 3 cut(s) | 168, 188, 361 |
| HpaI | GTTAAC | 1 cut(s) | 159 |
| Hpy166II | GTNNAC | 1 cut(s) | 159 |
| Hpy188I | TCNGA | 3 cut(s) | 69, 127, 297 |
| Hpy188III | TCNNGA | 2 cut(s) | 100, 139 |
| Hpy8I | GTNNAC | 1 cut(s) | 159 |
| HpyCH4III | ACNGT | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 3 cut(s) | 165, 248, 305 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 278 |
| HpyF3I | CTNAG | 1 cut(s) | 260 |
| Hsp92II | CATG | 2 cut(s) | 48, 121 |
| KspAI | GTTAAC | 1 cut(s) | 159 |
| Kzo9I | GATC | 3 cut(s) | 10, 297, 319 |
| LpnPI | CCDG | 4 cut(s) | 198, 254, 281, 297 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MaeIII | GTNAC | 1 cut(s) | 61 |
| MalI | GATC | 3 cut(s) | 12, 299, 321 |
| MbiI | CCGCTC | 1 cut(s) | 289 |
| MboI | GATC | 3 cut(s) | 10, 297, 319 |
| MboII | GAAGA | 2 cut(s) | 249, 368 |
| MflI | RGATCY | 1 cut(s) | 10 |
| MluCI | AATT | 1 cut(s) | 16 |
| MmeI | TCCRAC | 2 cut(s) | 92, 318 |
| MnlI | CCTC | 2 cut(s) | 146, 346 |
| MroXI | GAANNNNTTC | 1 cut(s) | 255 |
| MseI | TTAA | 1 cut(s) | 158 |
| MspR9I | CCNGG | 1 cut(s) | 269 |
| Mva1269I | GAATGC | 2 cut(s) | 250, 255 |
| MvaI | CCWGG | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 278 |
| NdeII | GATC | 3 cut(s) | 10, 297, 319 |
| NlaIII | CATG | 2 cut(s) | 48, 121 |
| NlaIV | GGNNCC | 1 cut(s) | 104 |
| NspI | RCATGY | 1 cut(s) | 121 |
| NspV | TTCGAA | 1 cut(s) | 209 |
| PciI | ACATGT | 1 cut(s) | 117 |
| PctI | GAATGC | 2 cut(s) | 250, 255 |
| PdmI | GAANNNNTTC | 1 cut(s) | 255 |
| PfeI | GAWTC | 3 cut(s) | 168, 188, 361 |
| PscI | ACATGT | 1 cut(s) | 117 |
| Psp6I | CCWGG | 1 cut(s) | 267 |
| PspGI | CCWGG | 1 cut(s) | 267 |
| PspN4I | GGNNCC | 1 cut(s) | 104 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| PstNI | CAGNNNCTG | 2 cut(s) | 171, 191 |
| PsuI | RGATCY | 1 cut(s) | 10 |
| RsaI | GTAC | 1 cut(s) | 42 |
| RsaNI | GTAC | 1 cut(s) | 41 |
| SaqAI | TTAA | 1 cut(s) | 158 |
| Sau3AI | GATC | 3 cut(s) | 10, 297, 319 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| ScrFI | CCNGG | 1 cut(s) | 269 |
| SetI | ASST | 3 cut(s) | 108, 146, 229 |
| SfuI | TTCGAA | 1 cut(s) | 209 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SmlI | CTYRAG | 1 cut(s) | 107 |
| SmoI | CTYRAG | 1 cut(s) | 107 |
| Sse9I | AATT | 1 cut(s) | 16 |
| SsiI | CCGC | 1 cut(s) | 289 |
| SspMI | CTAG | 1 cut(s) | 228 |
| StyD4I | CCNGG | 1 cut(s) | 267 |
| TaaI | ACNGT | 1 cut(s) | 132 |
| TaqI | TCGA | 1 cut(s) | 209 |
| TaqII | GACCGA | 1 cut(s) | 21 |
| TasI | AATT | 1 cut(s) | 16 |
| TfiI | GAWTC | 3 cut(s) | 168, 188, 361 |
| Tru1I | TTAA | 1 cut(s) | 158 |
| Tru9I | TTAA | 1 cut(s) | 158 |
| TscAI | CASTG | 1 cut(s) | 307 |
| TspDTI | ATGAA | 2 cut(s) | 95, 212 |
| TspRI | CASTG | 1 cut(s) | 307 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XceI | RCATGY | 1 cut(s) | 121 |
| XmnI | GAANNNNTTC | 1 cut(s) | 255 |
| XspI | CTAG | 1 cut(s) | 228 |