RchiOBHm_Chr2g0095271

Bet1-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
8233758 .. 8236349
2592 bp
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UTR
Exon/CDS
Intron
PRQ47026

Sequence Viewer

Length: 252 bp
ATGACTCACAAAAGGGTTAACCCAGATCAAATCCAATTGAGAATTAATCCAATCCACGCTGATGTTGATGAGGAGATCACCAGTATTCGATCCCAAGTCAGAAAATTGAGAAACCCACTTTGCCCAAATAACAATGGAGTTCACATCTATACTCTGATCCAATCCAAATGGGAAAAGCTGTTCTTCAAAAGGTACCGTGTCTCAGACTCATGGGCTTGCAATGATAGTTGTCAAAGACCAATTATAATGTGA

Protein Analysis

83

Amino Acids

9.88

Weight (kDa)

9.5

Isoelectric Point (pI)

52.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 245
Acc65I GGTACC 1 cut(s) 192
AccB1I GGYRCC 1 cut(s) 192
AclWI GGATC 2 cut(s) 84, 151
AfaI GTAC 1 cut(s) 194
AgsI TTSAA 1 cut(s) 187
AloI GAACNNNNNNTCC 2 cut(s) 164, 196
AluBI AGCT 1 cut(s) 178
AluI AGCT 1 cut(s) 178
Alw26I GTCTC 1 cut(s) 205
AlwI GGATC 2 cut(s) 84, 151
AseI ATTAAT 1 cut(s) 45
Asp718I GGTACC 1 cut(s) 192
AsuHPI GGTGA 1 cut(s) 70
BanI GGYRCC 1 cut(s) 192
BcoDI GTCTC 1 cut(s) 205
BmiI GGNNCC 1 cut(s) 194
Bse1I ACTGG 1 cut(s) 81
Bse3DI GCAATG 1 cut(s) 226
BseMI GCAATG 1 cut(s) 226
BseMII CTCAG 1 cut(s) 216
BseNI ACTGG 1 cut(s) 81
BseRI GAGGAG 1 cut(s) 86
BshNI GGYRCC 1 cut(s) 192
BsmAI GTCTC 1 cut(s) 205
Bsp143I GATC 4 cut(s) 25, 75, 89, 156
BspCNI CTCAG 1 cut(s) 215
BspLI GGNNCC 1 cut(s) 194
BspPI GGATC 2 cut(s) 84, 151
BspT107I GGYRCC 1 cut(s) 192
BsrDI GCAATG 1 cut(s) 226
BsrI ACTGG 1 cut(s) 81
BssMI GATC 4 cut(s) 25, 75, 89, 156
Bst4CI ACNGT 1 cut(s) 197
BstC8I GCNNGC 1 cut(s) 217
BstDEI CTNAG 1 cut(s) 202
BstKTI GATC 4 cut(s) 28, 78, 92, 159
BstMAI GTCTC 1 cut(s) 205
BstMBI GATC 4 cut(s) 25, 75, 89, 156
Cac8I GCNNGC 1 cut(s) 217
Csp6I GTAC 1 cut(s) 193
CviAII CATG 1 cut(s) 210
CviJI RGCY 2 cut(s) 178, 215
CviKI_1 RGCY 2 cut(s) 178, 215
CviQI GTAC 1 cut(s) 193
DdeI CTNAG 1 cut(s) 202
DpnI GATC 4 cut(s) 27, 77, 91, 158
DpnII GATC 4 cut(s) 25, 75, 89, 156
FaeI CATG 1 cut(s) 213
FaiI YATR 3 cut(s) 150, 211, 245
FalI AAGNNNNNCTT 2 cut(s) 167, 199
FatI CATG 1 cut(s) 209
Hin1II CATG 1 cut(s) 213
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HinfI GANTC 2 cut(s) 4, 206
HpaI GTTAAC 1 cut(s) 19
HphI GGTGA 1 cut(s) 70
Hpy166II GTNNAC 2 cut(s) 19, 142
Hpy188I TCNGA 3 cut(s) 101, 156, 205
Hpy8I GTNNAC 2 cut(s) 19, 142
HpyCH4III ACNGT 1 cut(s) 197
HpyCH4V TGCA 1 cut(s) 219
HpyF3I CTNAG 1 cut(s) 202
Hsp92II CATG 1 cut(s) 213
KpnI GGTACC 1 cut(s) 196
KspAI GTTAAC 1 cut(s) 19
Kzo9I GATC 4 cut(s) 25, 75, 89, 156
LpnPI CCDG 2 cut(s) 36, 94
MalI GATC 4 cut(s) 27, 77, 91, 158
MboI GATC 4 cut(s) 25, 75, 89, 156
MboII GAAGA 1 cut(s) 175
MfeI CAATTG 1 cut(s) 35
MluCI AATT 4 cut(s) 35, 42, 104, 240
MlyI GAGTC 1 cut(s) 200
MnlI CCTC 1 cut(s) 64
MseI TTAA 2 cut(s) 18, 45
MslI CAYNNNNRTG 1 cut(s) 60
MunI CAATTG 1 cut(s) 35
NdeII GATC 4 cut(s) 25, 75, 89, 156
NlaIII CATG 1 cut(s) 213
NlaIV GGNNCC 1 cut(s) 194
PleI GAGTC 1 cut(s) 200
PpsI GAGTC 1 cut(s) 200
PshBI ATTAAT 1 cut(s) 45
PsiI TTATAA 1 cut(s) 245
PspN4I GGNNCC 1 cut(s) 194
RsaI GTAC 1 cut(s) 194
RsaNI GTAC 1 cut(s) 193
RseI CAYNNNNRTG 1 cut(s) 60
SaqAI TTAA 2 cut(s) 18, 45
Sau3AI GATC 4 cut(s) 25, 75, 89, 156
SchI GAGTC 1 cut(s) 200
SetI ASST 2 cut(s) 180, 194
SgeI CNNG 7 cut(s) 35, 68, 93, 107, 209, 222, 228
SmiMI CAYNNNNRTG 1 cut(s) 60
Sse9I AATT 4 cut(s) 35, 42, 104, 240
TaaI ACNGT 1 cut(s) 197
TaqI TCGA 1 cut(s) 88
TasI AATT 4 cut(s) 35, 42, 104, 240
Tru1I TTAA 2 cut(s) 18, 45
Tru9I TTAA 2 cut(s) 18, 45
VspI ATTAAT 1 cut(s) 45
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.