RchiOBHm_Chr2g0100851

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
12653897 .. 12658427
4531 bp
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UTR
Exon/CDS
Intron
PRQ47547

Sequence Viewer

Length: 1551 bp
ATGTTCATTCCATCAAAAGAAGTTCTCCTATTTCTTGCTCAGAAGCACTATGAGACCTTCATTCTTGCAGTGCTTTCCATTGGAGTAATATTTTTGGTTCCAAAATTTGGTTGGAAAACGGTTGCAATTAGCTACAGAGGTCATATCCGTGGCCGGTTGGGTTTACCCTTTATAGGTGAAACCTTTTCTTTGCTTTCAGCAACTAACAGCACAAAAGGATGCTACGAGTTTGTCAGACTCCGACGACAATGGTACGGGAAGTGGTTCAAGACAAGGATTTTCGGAAAGATCCATGTATTTGTGCCAAGCGCAGAGGGTGCAAAAATGATTTTTTCAAATGATTTTGTAAAGTTCAACAAAGGCTATGTGAAATCAATGGCAGATTGTGTTGGAAAGAACAGCTTGCTCTGTGTACCACATGAAAACCACAGAAGGATAAGGCGCCTTCTATCAGATCCTTTCTCCATGAACTCTTTATCTCAATTTGTTCAGAAATTTGATAAAATGCTGTGCCAGAAGTTGAAGAAGCTAGAAGAAGGAGGAAAAAGCTTTGTGGTGCTTGAATTTGGAATGAAGATGACATTTGATGCAATGTGCAGCATGCTAATGAGTGTCACTGAGGATTCATTGTTACGGAAGATTGAGAAAGATTGCACTACTATTTCAGATGCAATGTTATCCCTTCCAGTCATGATTCCAGGCACCAGATATTACAAAGGCATCAAGGCACGCGGACGTCTTATGGAAACCTTTAAGGACATGATCGACAGAAGAAGAAGCGGGAAGGAGTCTCCAGAAGACTTCCTACAGTCCACGTTAGACAGAGATTCATACCCTCCCAATGAAAAGCTTCAAGACTCGGAAATTATAGACAACCTATTGACACTGATAATTGCAGGGCAGACAACCACTGCAGCTGCGATAATGTGGAGTGTCAAGTTTCTGGACGAGAACAAAGAAGCCCAAGACAGACTCAGAGAGGAACAGTTGTCAATAGCAAAGTCTAAGCCAGATGGAGCTTCAGTTACACTAGAAGATATCAAAGATATGTCCTACTGTTTGAAGTATGTTGCTAATAGTAATGACATCATGGGAATCATAGTGATGGCATTTCAACATTCCATTTGCTTTGTTTTCCAGGTTATCAAAGAGACACTGAGGATGGCCAATGTCCTTCTCTGGTTTCCTCGCTTTGCACTCAGTGACTGCACTATACAAGGCAAGCTTTCAAGTTTTGAAATAAAGAAAGGGTGGCATGCGAACATAGATGCAACTTGCATACACTATGATCCAGATTTGTATGCAGACCCTATGCAGTTCAACCCAGATAGATTTGATGAAATGCAAAAGCCAAATAGCTTTATACCATTTGGTTCAGGACCCAGAACATGCTTAGGAATCAATATGGCAAAGGTGACAATGCTGGTCTTTTTACACCGTTTAAGTAGTGGTTACAGGTGGACAGTCAATGATCTGGATACTAGCTTAGAAAAGAAGGCACACATTCCTAGACTAAGAAGTGGATGTCCTATTACTTTGAAGGCCTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

516

Amino Acids

58.97

Weight (kDa)

9.2

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 54 - 353 2.4e-26 Cytochrome P450
p450 PF00067 377 - 494 1.4e-28 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 739
AccB1I GGYRCC 2 cut(s) 441, 701
AccB7I CCANNNNNTGG 1 cut(s) 107
AccII CGCG 1 cut(s) 732
AciI CCGC 2 cut(s) 732, 780
AclWI GGATC 3 cut(s) 283, 449, 1283
AcoI YGGCCR 2 cut(s) 151, 1164
AcsI RAATTY 3 cut(s) 104, 494, 563
AcuI CTGAAG 1 cut(s) 1005
AcyI GRCGYC 2 cut(s) 442, 736
AdeI CACNNNGTG 1 cut(s) 1202
AfaI GTAC 2 cut(s) 254, 414
AfiI CCNNNNNNNGG 2 cut(s) 107, 173
AjnI CCWGG 2 cut(s) 697, 1137
Alw26I GTCTC 3 cut(s) 47, 795, 1145
AlwI GGATC 3 cut(s) 283, 449, 1283
AlwNI CAGNNNCTG 1 cut(s) 1206
AoxI GGCC 3 cut(s) 151, 1164, 1542
ApeKI GCWGC 3 cut(s) 597, 914, 917
ApoI RAATTY 3 cut(s) 104, 494, 563
Asp700I GAANNNNTTC 2 cut(s) 263, 849
AspLEI GCGC 2 cut(s) 311, 444
AspS9I GGNCC 1 cut(s) 1379
AsuHPI GGTGA 2 cut(s) 188, 1426
AvaII GGWCC 1 cut(s) 1379
BalI TGGCCA 1 cut(s) 1166
BanI GGYRCC 2 cut(s) 441, 701
BarI GAAGNNNNNNTAC 2 cut(s) 789, 821
BbsI GAAGAC 1 cut(s) 804
BbvI GCAGC 3 cut(s) 609, 904, 926
BccI CCATC 4 cut(s) 19, 1007, 1099, 1156
BciT130I CCWGG 2 cut(s) 699, 1139
BciVI GTATCC 1 cut(s) 1471
BcoDI GTCTC 3 cut(s) 47, 795, 1145
BfaI CTAG 4 cut(s) 530, 1031, 1482, 1509
BfmI CTRYAG 3 cut(s) 133, 806, 912
BfoI RGCGCY 1 cut(s) 445
BfuI GTATCC 1 cut(s) 1471
BisI GCNGC 3 cut(s) 598, 915, 918
BlsI GCNGC 3 cut(s) 599, 916, 919
Bme1390I CCNGG 2 cut(s) 699, 1139
Bme18I GGWCC 1 cut(s) 1379
BmgT120I GGNCC 1 cut(s) 1379
BmiI GGNNCC 4 cut(s) 99, 443, 703, 1381
BmrFI CCNGG 2 cut(s) 699, 1139
BmsI GCATC 5 cut(s) 209, 577, 658, 729, 1258
BpiI GAAGAC 1 cut(s) 804
BpmI CTGGAG 1 cut(s) 777
Bpu10I CCTNAGC 1 cut(s) 1393
BsaHI GRCGYC 2 cut(s) 442, 736
BsaI GGTCTC 1 cut(s) 47
BsaJI CCNNGG 1 cut(s) 148
BsaXI ACNNNNNCTCC 2 cut(s) 1008, 1038
Bsc4I CCNNNNNNNGG 2 cut(s) 107, 173
Bse118I RCCGGY 1 cut(s) 153
Bse1I ACTGG 1 cut(s) 686
Bse3DI GCAATG 2 cut(s) 597, 678
BseBI CCWGG 2 cut(s) 699, 1139
BseDI CCNNGG 1 cut(s) 148
BseGI GGATG 3 cut(s) 224, 1167, 1529
BseLI CCNNNNNNNGG 2 cut(s) 107, 173
BseMI GCAATG 2 cut(s) 597, 678
BseMII CTCAG 5 cut(s) 53, 609, 988, 1148, 1213
BseNI ACTGG 1 cut(s) 686
BseXI GCAGC 3 cut(s) 609, 904, 926
BsgI GTGCAG 2 cut(s) 616, 1192
Bsh1236I CGCG 1 cut(s) 732
BshFI GGCC 3 cut(s) 153, 1166, 1544
BshNI GGYRCC 2 cut(s) 441, 701
BsiSI CCGG 1 cut(s) 154
BslI CCNNNNNNNGG 2 cut(s) 107, 173
BsmAI GTCTC 3 cut(s) 47, 795, 1145
BsnI GGCC 3 cut(s) 153, 1166, 1544
Bso31I GGTCTC 1 cut(s) 47
Bsp143I GATC 5 cut(s) 288, 454, 762, 1288, 1471
BspACI CCGC 2 cut(s) 732, 780
BspANI GGCC 3 cut(s) 153, 1166, 1544
BspCNI CTCAG 5 cut(s) 52, 610, 987, 1149, 1212
BspFNI CGCG 1 cut(s) 732
BspHI TCATGA 1 cut(s) 690
BspLI GGNNCC 4 cut(s) 99, 443, 703, 1381
BspMAI CTGCAG 1 cut(s) 916
BspPI GGATC 3 cut(s) 283, 449, 1283
BspT107I GGYRCC 2 cut(s) 441, 701
BspTNI GGTCTC 1 cut(s) 47
BsrDI GCAATG 2 cut(s) 597, 678
BsrFI RCCGGY 1 cut(s) 153
BsrI ACTGG 1 cut(s) 686
BssAI RCCGGY 1 cut(s) 153
BssECI CCNNGG 1 cut(s) 148
BssMI GATC 5 cut(s) 288, 454, 762, 1288, 1471
BssNI GRCGYC 2 cut(s) 442, 736
Bst2UI CCWGG 2 cut(s) 699, 1139
Bst4CI ACNGT 6 cut(s) 121, 810, 987, 1058, 1439, 1465
BstACI GRCGYC 2 cut(s) 442, 736
BstAPI GCANNNNNTGC 1 cut(s) 317
BstC8I GCNNGC 5 cut(s) 404, 602, 730, 1223, 1257
BstDEI CTNAG 9 cut(s) 39, 618, 974, 1005, 1157, 1199, 1393, 1486, 1514
BstDSI CCRYGG 1 cut(s) 148
BstF5I GGATG 3 cut(s) 224, 1167, 1529
BstFNI CGCG 1 cut(s) 732
BstH2I RGCGCY 1 cut(s) 445
BstHHI GCGC 2 cut(s) 311, 444
BstKTI GATC 5 cut(s) 291, 457, 765, 1291, 1474
BstMAI GTCTC 3 cut(s) 47, 795, 1145
BstMBI GATC 5 cut(s) 288, 454, 762, 1288, 1471
BstMWI GCNNNNNNNGC 1 cut(s) 317
BstNI CCWGG 2 cut(s) 699, 1139
BstNSI RCATGY 3 cut(s) 604, 1259, 1392
BstSCI CCNGG 2 cut(s) 697, 1137
BstSFI CTRYAG 3 cut(s) 133, 806, 912
BstUI CGCG 1 cut(s) 732
BstV1I GCAGC 3 cut(s) 609, 904, 926
BstV2I GAAGAC 1 cut(s) 804
BstX2I RGATCY 2 cut(s) 288, 454
BstYI RGATCY 2 cut(s) 288, 454
BsuI GTATCC 1 cut(s) 1471
BsuRI GGCC 3 cut(s) 153, 1166, 1544
BtgI CCRYGG 1 cut(s) 148
BtsCI GGATG 3 cut(s) 224, 1167, 1529
BtsI GCAGTG 2 cut(s) 75, 909
BtsIMutI CAGTG 6 cut(s) 75, 615, 884, 909, 1154, 1207
Cac8I GCNNGC 5 cut(s) 404, 602, 730, 1223, 1257
CaiI CAGNNNCTG 1 cut(s) 1206
CciI TCATGA 1 cut(s) 690
CfoI GCGC 2 cut(s) 311, 444
Cfr10I RCCGGY 1 cut(s) 153
Cfr13I GGNCC 1 cut(s) 1379
Csp6I GTAC 2 cut(s) 253, 413
CviAII CATG 9 cut(s) 293, 419, 466, 601, 691, 760, 1090, 1256, 1389
CviQI GTAC 2 cut(s) 253, 413
DdeI CTNAG 9 cut(s) 39, 618, 974, 1005, 1157, 1199, 1393, 1486, 1514
DinI GGCGCC 1 cut(s) 443
DpnI GATC 5 cut(s) 290, 456, 764, 1290, 1473
DpnII GATC 5 cut(s) 288, 454, 762, 1288, 1471
DraIII CACNNNGTG 1 cut(s) 1202
EaeI YGGCCR 2 cut(s) 151, 1164
Eco147I AGGCCT 1 cut(s) 1544
Eco31I GGTCTC 1 cut(s) 47
Eco32I GATATC 1 cut(s) 1039
Eco47I GGWCC 1 cut(s) 1379
Eco57I CTGAAG 1 cut(s) 1005
EcoO109I RGGNCCY 1 cut(s) 1379
EcoRII CCWGG 2 cut(s) 697, 1137
EcoRV GATATC 1 cut(s) 1039
EgeI GGCGCC 1 cut(s) 443
EheI GGCGCC 1 cut(s) 443
FaeI CATG 9 cut(s) 296, 422, 469, 604, 694, 763, 1093, 1259, 1392
FalI AAGNNNNNCTT 4 cut(s) 386, 418, 1209, 1241
FatI CATG 9 cut(s) 292, 418, 465, 600, 690, 759, 1089, 1255, 1388
FauI CCCGC 1 cut(s) 773
Fnu4HI GCNGC 3 cut(s) 598, 915, 918
FokI GGATG 3 cut(s) 231, 1174, 1536
Fsp4HI GCNGC 3 cut(s) 598, 915, 918
FspBI CTAG 4 cut(s) 530, 1031, 1482, 1509
GlaI GCGC 2 cut(s) 310, 443
GluI GCNGC 3 cut(s) 598, 915, 918
GsuI CTGGAG 1 cut(s) 777
HaeII RGCGCY 1 cut(s) 445
HaeIII GGCC 3 cut(s) 153, 1166, 1544
HapII CCGG 1 cut(s) 154
HhaI GCGC 2 cut(s) 311, 444
Hin1I GRCGYC 2 cut(s) 442, 736
Hin1II CATG 9 cut(s) 296, 422, 469, 604, 694, 763, 1093, 1259, 1392
Hin6I GCGC 2 cut(s) 309, 442
HinP1I GCGC 2 cut(s) 309, 442
HindIII AAGCTT 3 cut(s) 547, 848, 1223
HinfI GANTC 9 cut(s) 237, 623, 694, 788, 827, 857, 972, 1095, 1398
HpaII CCGG 1 cut(s) 154
HphI GGTGA 2 cut(s) 188, 1426
Hpy166II GTNNAC 4 cut(s) 164, 413, 813, 1461
Hpy188I TCNGA 9 cut(s) 42, 236, 242, 284, 454, 492, 667, 862, 977
Hpy188III TCNNGA 8 cut(s) 268, 691, 794, 854, 944, 1292, 1377, 1475
Hpy8I GTNNAC 4 cut(s) 164, 413, 813, 1461
Hpy99I CGWCG 1 cut(s) 246
HpyAV CCTTC 9 cut(s) 67, 426, 455, 530, 692, 778, 1184, 1489, 1534
HpyCH4III ACNGT 6 cut(s) 121, 810, 987, 1058, 1439, 1465
HpyCH4IV ACGT 2 cut(s) 736, 815
HpyF10VI GCNNNNNNNGC 1 cut(s) 317
HpyF3I CTNAG 9 cut(s) 39, 618, 974, 1005, 1157, 1199, 1393, 1486, 1514
HpySE526I ACGT 2 cut(s) 736, 815
Hsp92I GRCGYC 2 cut(s) 442, 736
Hsp92II CATG 9 cut(s) 296, 422, 469, 604, 694, 763, 1093, 1259, 1392
HspAI GCGC 2 cut(s) 309, 442
KasI GGCGCC 1 cut(s) 441
Kzo9I GATC 5 cut(s) 288, 454, 762, 1288, 1471
LmnI GCTCC 1 cut(s) 1016
Lsp1109I GCAGC 3 cut(s) 609, 904, 926
LweI GCATC 5 cut(s) 209, 577, 658, 729, 1258
MaeI CTAG 4 cut(s) 530, 1031, 1482, 1509
MaeII ACGT 2 cut(s) 736, 815
MaeIII GTNAC 6 cut(s) 613, 630, 1024, 1202, 1414, 1451
MalI GATC 5 cut(s) 290, 456, 764, 1290, 1473
MboI GATC 5 cut(s) 288, 454, 762, 1288, 1471
MboII GAAGA 8 cut(s) 535, 545, 586, 649, 783, 786, 809, 1046
MflI RGATCY 2 cut(s) 288, 454
MlsI TGGCCA 1 cut(s) 1166
MluCI AATT 7 cut(s) 104, 126, 482, 494, 563, 864, 891
MluNI TGGCCA 1 cut(s) 1166
Mly113I GGCGCC 1 cut(s) 442
MlyI GAGTC 4 cut(s) 231, 797, 851, 966
MmeI TCCRAC 3 cut(s) 92, 265, 370
MnlI CCTC 8 cut(s) 131, 307, 533, 613, 846, 973, 1152, 1197
Mox20I TGGCCA 1 cut(s) 1166
MroXI GAANNNNTTC 2 cut(s) 263, 849
MscI TGGCCA 1 cut(s) 1166
MseI TTAA 2 cut(s) 753, 1442
MslI CAYNNNNRTG 3 cut(s) 147, 605, 1103
Msp20I TGGCCA 1 cut(s) 1166
MspA1I CMGCKG 1 cut(s) 917
MspI CCGG 1 cut(s) 154
MspR9I CCNGG 2 cut(s) 699, 1139
MvaI CCWGG 2 cut(s) 699, 1139
MvnI CGCG 1 cut(s) 732
MwoI GCNNNNNNNGC 1 cut(s) 317
NarI GGCGCC 1 cut(s) 442
NdeII GATC 5 cut(s) 288, 454, 762, 1288, 1471
NlaIII CATG 9 cut(s) 296, 422, 469, 604, 694, 763, 1093, 1259, 1392
NlaIV GGNNCC 4 cut(s) 99, 443, 703, 1381
NmuCI GTSAC 3 cut(s) 613, 1202, 1414
NspI RCATGY 3 cut(s) 604, 1259, 1392
PaeI GCATGC 2 cut(s) 604, 1259
PagI TCATGA 1 cut(s) 690
PceI AGGCCT 1 cut(s) 1544
PdmI GAANNNNTTC 2 cut(s) 263, 849
PfeI GAWTC 5 cut(s) 623, 694, 827, 1095, 1398
PflMI CCANNNNNTGG 1 cut(s) 107
PkrI GCNGC 3 cut(s) 599, 916, 919
PleI GAGTC 4 cut(s) 231, 796, 851, 966
PluTI GGCGCC 1 cut(s) 445
PpsI GAGTC 4 cut(s) 231, 796, 851, 966
PpuMI RGGWCCY 1 cut(s) 1379
Psp5II RGGWCCY 1 cut(s) 1379
Psp6I CCWGG 2 cut(s) 697, 1137
PspGI CCWGG 2 cut(s) 697, 1137
PspN4I GGNNCC 4 cut(s) 99, 443, 703, 1381
PspPI GGNCC 1 cut(s) 1379
PspPPI RGGWCCY 1 cut(s) 1379
PstI CTGCAG 1 cut(s) 916
PstNI CAGNNNCTG 1 cut(s) 1206
PsuI RGATCY 2 cut(s) 288, 454
PvuII CAGCTG 1 cut(s) 917
RsaI GTAC 2 cut(s) 254, 414
RsaNI GTAC 2 cut(s) 253, 413
RseI CAYNNNNRTG 3 cut(s) 147, 605, 1103
SaqAI TTAA 2 cut(s) 753, 1442
SatI GCNGC 3 cut(s) 598, 915, 918
Sau3AI GATC 5 cut(s) 288, 454, 762, 1288, 1471
Sau96I GGNCC 1 cut(s) 1379
SchI GAGTC 4 cut(s) 231, 797, 851, 966
ScrFI CCNGG 2 cut(s) 699, 1139
SfaNI GCATC 5 cut(s) 209, 577, 658, 729, 1258
SfcI CTRYAG 3 cut(s) 133, 806, 912
SfoI GGCGCC 1 cut(s) 443
SinI GGWCC 1 cut(s) 1379
SmiMI CAYNNNNRTG 3 cut(s) 147, 605, 1103
SphI GCATGC 2 cut(s) 604, 1259
Sse9I AATT 7 cut(s) 104, 126, 482, 494, 563, 864, 891
SseBI AGGCCT 1 cut(s) 1544
SsiI CCGC 2 cut(s) 732, 780
SspDI GGCGCC 1 cut(s) 441
SspI AATATT 1 cut(s) 90
SspMI CTAG 4 cut(s) 530, 1031, 1482, 1509
StuI AGGCCT 1 cut(s) 1544
StyD4I CCNGG 2 cut(s) 697, 1137
TaaI ACNGT 6 cut(s) 121, 810, 987, 1058, 1439, 1465
TaiI ACGT 2 cut(s) 739, 818
TaqI TCGA 1 cut(s) 765
TasI AATT 7 cut(s) 104, 126, 482, 494, 563, 864, 891
TfiI GAWTC 5 cut(s) 623, 694, 827, 1095, 1398
Tru1I TTAA 2 cut(s) 753, 1442
Tru9I TTAA 2 cut(s) 753, 1442
TscAI CASTG 6 cut(s) 75, 622, 891, 916, 1161, 1207
TseFI GTSAC 3 cut(s) 613, 1202, 1414
TseI GCWGC 3 cut(s) 597, 914, 917
Tsp45I GTSAC 3 cut(s) 613, 1202, 1414
TspDTI ATGAA 8 cut(s) 49, 435, 482, 587, 615, 819, 858, 1353
TspGWI ACGGA 2 cut(s) 137, 649
TspRI CASTG 6 cut(s) 75, 622, 891, 916, 1161, 1207
Van91I CCANNNNNTGG 1 cut(s) 107
VpaK11BI GGWCC 1 cut(s) 1379
XapI RAATTY 3 cut(s) 104, 494, 563
XceI RCATGY 3 cut(s) 604, 1259, 1392
XcmI CCANNNNNNNNNTGG 1 cut(s) 108
XmnI GAANNNNTTC 2 cut(s) 263, 849
XspI CTAG 4 cut(s) 530, 1031, 1482, 1509
ZraI GACGTC 1 cut(s) 737
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.