Rh7DG200200

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0004522
Physical Location & Seq
Forward (+)
18902860 .. 18908360
5501 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG200200.1

Sequence Viewer

Length: 1440 bp
ATGCTGAGTGCAATATCAAGAGCAGAGTTCCTCTTCCTTGTTAAGAAGTATTATGATGTTCTCATAGTTGCACTACTGTTTTCTATAGGAGTTGCATTTTTCGTCTCTAAATTAGCATGGAGAAAGGTCACAAGTTCCAGAGGTCACATCCCTGGCCGGTTGGGGTTACCCTTTATAGGTGAAACCATTTCTTTTCTGTCAGCAATGAACAGCACAAGAGGATGCTATGATTTTGTCAGACGCCGGCGAATATGGTACGGGAAGTGGTTCAAGACGAGAATTTTTGGCAAGATCCATGTGTTCGTTCCAAGTACCGAGGGTGCAAAAATGATTTTTTCTAATGATTTTGTTAAGTTCAACAAAGGGTATGTGAAATCATTGGCAGATTGTATTGGAGATAAAAGCGTGTTCTGTGTACCACATGAGGACCATCAAAGGATAAGGCGCTTATTATCAGATCCTTTCTCCATGAATTCTTTATCTTCATATATTGAGAAATTTGATAAAATGCTGAGTCAGAAACTGAAGAAACTAGAACAAGGTGGGAAAAGCTTTGCAGTGCTTGACTTCAGTATGAGGATGACGTTTGATGCAATGTGCTGCATGCTAATGAGTGTCACGGATGAGCCCTTGCTAAGGCAGCTTGACAAAGACTGCATTGCAGTCTCGAATGGACTGATATCTGTTCCTGTCATGATTCCAGGCACTAGATATTACAAAGGCATCAAGGCACGCAGACGTCTTTTGGAAACCTTTAAAGACATGATTGCCAAAAGACGGAGTGGGAAGGAGTGGCCAGAACCAGAAGATTTCCTACAGTCCATGTTACGAAGAGATTCATACCCTCCCAATGAAAAGCTGCAAGACTCGGAAATCATGGACAACCTAATGACACTTCTGATTTCAGGGCAAATCAGCTCTTCAGCTGCAATGATGTGGAGTGTCAAGTTTCTGGATGAGAACCAACAAGTCCAAGACAAACTTAGGGAGGAACAATTGTCCATAGCCAGATCCAAGCCCCAAGGAGCATCAGTTACCCTCGAAGATGTTAATAATATGTCATACTGTTGGAAGGTCGTTAAAGAAACACTGAGGATGTCTAATGTGGTTTTGTGGTATCCTCGCGTTGCACTCGGTGACTGTAATATAGAAGGTATTGAAATAAAGAAAGGGTGGCATGTGAACATTGACGCGACATGCATACACAACGACCCGGATTTGTACCCAGACCCTTTCAAATTCAATCCTTCTAGATTTGATGAAATGCAAAAGCCTTACAGTTTCGTACCATTTGGGTCGGGACCCAGGACATGCATGGGAATCAACATGGGCAAGACGACAATGATGGTCTTTCTTCACCGTCTCACTACTGACCACCGTTGCTGTTGTACAGATTCGCGAACCCCTCCTTCTCTGGTCCCAGTCGCAGTCAAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
p450

Protein Analysis

479

Amino Acids

54.9

Weight (kDa)

9.31

Isoelectric Point (pI)

52.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 55 - 455 1.2e-58 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 742
AccII CGCG 3 cut(s) 1125, 1193, 1399
AclWI GGATC 3 cut(s) 286, 452, 1005
AcoI YGGCCR 2 cut(s) 154, 794
AcsI RAATTY 4 cut(s) 279, 472, 497, 1238
AcuI CTGAAG 3 cut(s) 545, 553, 906
AcyI GRCGYC 2 cut(s) 241, 739
AdeI CACNNNGTG 1 cut(s) 1136
AfaI GTAC 6 cut(s) 257, 313, 417, 1223, 1287, 1390
AfiI CCNNNNNNNGG 3 cut(s) 176, 636, 777
AgsI TTSAA 5 cut(s) 271, 358, 1160, 1237, 1243
AjnI CCWGG 3 cut(s) 151, 700, 1304
AluBI AGCT 5 cut(s) 552, 643, 859, 918, 926
AluI AGCT 5 cut(s) 552, 643, 859, 918, 926
Alw26I GTCTC 3 cut(s) 109, 670, 1367
AlwI GGATC 3 cut(s) 286, 452, 1005
AlwNI CAGNNNCTG 1 cut(s) 523
AoxI GGCC 2 cut(s) 154, 794
ApeKI GCWGC 4 cut(s) 600, 640, 859, 926
ApoI RAATTY 4 cut(s) 279, 472, 497, 1238
Asp700I GAANNNNTTC 2 cut(s) 266, 835
AspLEI GCGC 1 cut(s) 447
AspS9I GGNCC 3 cut(s) 427, 1301, 1417
AsuC2I CCSGG 1 cut(s) 1214
AsuHPI GGTGA 3 cut(s) 191, 1148, 1349
AvaII GGWCC 3 cut(s) 427, 1301, 1417
BalI TGGCCA 1 cut(s) 796
BanII GRGCYC 1 cut(s) 630
BarI GAAGNNNNNNTAC 2 cut(s) 798, 830
BbvI GCAGC 4 cut(s) 587, 652, 846, 913
BccI CCATC 2 cut(s) 438, 1339
BciT130I CCWGG 3 cut(s) 153, 702, 1306
BciVI GTATCC 1 cut(s) 1128
BcnI CCSGG 1 cut(s) 1214
BcoDI GTCTC 3 cut(s) 109, 670, 1367
BfaI CTAG 3 cut(s) 533, 708, 1251
BfmI CTRYAG 2 cut(s) 84, 815
BfoI RGCGCY 1 cut(s) 448
BfuI GTATCC 1 cut(s) 1128
BisI GCNGC 4 cut(s) 601, 641, 860, 927
BlsI GCNGC 4 cut(s) 602, 642, 861, 928
Bme1390I CCNGG 4 cut(s) 153, 702, 1214, 1306
Bme18I GGWCC 3 cut(s) 427, 1301, 1417
BmgT120I GGNCC 3 cut(s) 427, 1301, 1417
BmiI GGNNCC 3 cut(s) 1302, 1303, 1419
BmrFI CCNGG 4 cut(s) 153, 702, 1214, 1306
BmrI ACTGGG 1 cut(s) 1415
BmsI GCATC 4 cut(s) 212, 580, 732, 1037
BmuI ACTGGG 1 cut(s) 1415
Bpu10I CCTNAGC 1 cut(s) 635
BpuMI CCSGG 1 cut(s) 1214
BsaHI GRCGYC 2 cut(s) 241, 739
BsaJI CCNNGG 4 cut(s) 151, 315, 1021, 1304
BsaXI ACNNNNNCTCC 2 cut(s) 1017, 1047
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 636, 777
Bse118I RCCGGY 2 cut(s) 156, 243
Bse1I ACTGG 1 cut(s) 1421
Bse3DI GCAATG 4 cut(s) 210, 600, 657, 936
BseBI CCWGG 3 cut(s) 153, 702, 1306
BseDI CCNNGG 4 cut(s) 151, 315, 1021, 1304
BseGI GGATG 6 cut(s) 147, 227, 585, 628, 961, 1101
BseLI CCNNNNNNNGG 3 cut(s) 176, 636, 777
BseMI GCAATG 4 cut(s) 210, 600, 657, 936
BseMII CTCAG 2 cut(s) 503, 1082
BseNI ACTGG 1 cut(s) 1421
BseXI GCAGC 4 cut(s) 587, 652, 846, 913
Bsh1236I CGCG 3 cut(s) 1125, 1193, 1399
BshFI GGCC 2 cut(s) 156, 796
BsiSI CCGG 3 cut(s) 157, 244, 1214
BslFI GGGAC 2 cut(s) 1314, 1403
BslI CCNNNNNNNGG 3 cut(s) 176, 636, 777
BsmAI GTCTC 3 cut(s) 109, 670, 1367
BsmBI CGTCTC 2 cut(s) 109, 1367
BsmFI GGGAC 2 cut(s) 1314, 1403
BsnI GGCC 2 cut(s) 156, 796
Bsp1286I GDGCHC 1 cut(s) 630
Bsp1407I TGTACA 1 cut(s) 1388
Bsp143I GATC 3 cut(s) 291, 457, 1010
Bsp68I TCGCGA 1 cut(s) 1399
BspANI GGCC 2 cut(s) 156, 796
BspCNI CTCAG 2 cut(s) 504, 1083
BspFNI CGCG 3 cut(s) 1125, 1193, 1399
BspHI TCATGA 1 cut(s) 693
BspLI GGNNCC 3 cut(s) 1302, 1303, 1419
BspPI GGATC 3 cut(s) 286, 452, 1005
BspQI GCTCTTC 1 cut(s) 925
BsrDI GCAATG 4 cut(s) 210, 600, 657, 936
BsrFI RCCGGY 2 cut(s) 156, 243
BsrGI TGTACA 1 cut(s) 1388
BsrI ACTGG 1 cut(s) 1421
BssAI RCCGGY 2 cut(s) 156, 243
BssECI CCNNGG 4 cut(s) 151, 315, 1021, 1304
BssMI GATC 3 cut(s) 291, 457, 1010
BssNI GRCGYC 2 cut(s) 241, 739
BssT1I CCWWGG 1 cut(s) 1021
Bst2UI CCWGG 3 cut(s) 153, 702, 1306
Bst4CI ACNGT 7 cut(s) 78, 819, 1067, 1142, 1280, 1361, 1379
Bst6I CTCTTC 3 cut(s) 38, 826, 925
BstACI GRCGYC 2 cut(s) 241, 739
BstAUI TGTACA 1 cut(s) 1388
BstC8I GCNNGC 3 cut(s) 245, 605, 733
BstDEI CTNAG 5 cut(s) 5, 512, 635, 983, 1091
BstEII GGTNACC 1 cut(s) 165
BstENI CCTNNNNNAGG 1 cut(s) 634
BstF5I GGATG 6 cut(s) 147, 227, 585, 628, 961, 1101
BstFNI CGCG 3 cut(s) 1125, 1193, 1399
BstH2I RGCGCY 1 cut(s) 448
BstHHI GCGC 1 cut(s) 447
BstKTI GATC 3 cut(s) 294, 460, 1013
BstMAI GTCTC 3 cut(s) 109, 670, 1367
BstMBI GATC 3 cut(s) 291, 457, 1010
BstMWI GCNNNNNNNGC 2 cut(s) 640, 1433
BstNI CCWGG 3 cut(s) 153, 702, 1306
BstNSI RCATGY 4 cut(s) 607, 1181, 1200, 1314
BstPI GGTNACC 1 cut(s) 165
BstSCI CCNGG 4 cut(s) 151, 700, 1212, 1304
BstSFI CTRYAG 2 cut(s) 84, 815
BstUI CGCG 3 cut(s) 1125, 1193, 1399
BstV1I GCAGC 4 cut(s) 587, 652, 846, 913
BstX2I RGATCY 3 cut(s) 291, 457, 1010
BstYI RGATCY 3 cut(s) 291, 457, 1010
BsuI GTATCC 1 cut(s) 1128
BsuRI GGCC 2 cut(s) 156, 796
BtsCI GGATG 6 cut(s) 147, 227, 585, 628, 961, 1101
BtsI GCAGTG 1 cut(s) 564
BtsIMutI CAGTG 2 cut(s) 564, 1088
BtuMI TCGCGA 1 cut(s) 1399
Cac8I GCNNGC 3 cut(s) 245, 605, 733
CaiI CAGNNNCTG 1 cut(s) 523
CciI TCATGA 1 cut(s) 693
CfoI GCGC 1 cut(s) 447
Cfr10I RCCGGY 2 cut(s) 156, 243
Cfr13I GGNCC 3 cut(s) 427, 1301, 1417
CseI GACGC 2 cut(s) 249, 1199
Csp6I GTAC 6 cut(s) 256, 312, 416, 1222, 1286, 1389
CviQI GTAC 6 cut(s) 256, 312, 416, 1222, 1286, 1389
DdeI CTNAG 5 cut(s) 5, 512, 635, 983, 1091
DpnI GATC 3 cut(s) 293, 459, 1012
DpnII GATC 3 cut(s) 291, 457, 1010
DraI TTTAAA 1 cut(s) 757
DraIII CACNNNGTG 1 cut(s) 1136
EaeI YGGCCR 2 cut(s) 154, 794
Eam1104I CTCTTC 3 cut(s) 38, 826, 925
EarI CTCTTC 3 cut(s) 38, 826, 925
Eco130I CCWWGG 1 cut(s) 1021
Eco24I GRGCYC 1 cut(s) 630
Eco32I GATATC 1 cut(s) 681
Eco47I GGWCC 3 cut(s) 427, 1301, 1417
Eco57I CTGAAG 3 cut(s) 545, 553, 906
Eco91I GGTNACC 1 cut(s) 165
EcoNI CCTNNNNNAGG 1 cut(s) 634
EcoO109I RGGNCCY 1 cut(s) 1301
EcoO65I GGTNACC 1 cut(s) 165
EcoRI GAATTC 1 cut(s) 472
EcoRII CCWGG 3 cut(s) 151, 700, 1304
EcoRV GATATC 1 cut(s) 681
EcoT14I CCWWGG 1 cut(s) 1021
EcoT22I ATGCAT 2 cut(s) 1202, 1316
EcoT38I GRGCYC 1 cut(s) 630
ErhI CCWWGG 1 cut(s) 1021
Esp3I CGTCTC 2 cut(s) 109, 1367
FalI AAGNNNNNCTT 2 cut(s) 966, 998
FaqI GGGAC 2 cut(s) 1314, 1403
Fnu4HI GCNGC 4 cut(s) 601, 641, 860, 927
FokI GGATG 6 cut(s) 134, 234, 592, 635, 968, 1108
FriOI GRGCYC 1 cut(s) 630
Fsp4HI GCNGC 4 cut(s) 601, 641, 860, 927
FspBI CTAG 3 cut(s) 533, 708, 1251
GlaI GCGC 1 cut(s) 446
GluI GCNGC 4 cut(s) 601, 641, 860, 927
HaeII RGCGCY 1 cut(s) 448
HaeIII GGCC 2 cut(s) 156, 796
HapII CCGG 3 cut(s) 157, 244, 1214
HgaI GACGC 2 cut(s) 249, 1199
HhaI GCGC 1 cut(s) 447
Hin1I GRCGYC 2 cut(s) 241, 739
Hin6I GCGC 1 cut(s) 445
HinP1I GCGC 1 cut(s) 445
HindIII AAGCTT 1 cut(s) 550
HinfI GANTC 6 cut(s) 514, 697, 836, 866, 1320, 1394
HpaII CCGG 3 cut(s) 157, 244, 1214
HphI GGTGA 3 cut(s) 191, 1148, 1349
Hpy166II GTNNAC 2 cut(s) 416, 1183
Hpy188I TCNGA 5 cut(s) 239, 457, 519, 871, 900
Hpy188III TCNNGA 9 cut(s) 18, 138, 271, 667, 694, 953, 1251, 1299, 1398
Hpy8I GTNNAC 2 cut(s) 416, 1183
HpyAV CCTTC 5 cut(s) 781, 1066, 1145, 1257, 1419
HpyCH4III ACNGT 7 cut(s) 78, 819, 1067, 1142, 1280, 1361, 1379
HpyCH4IV ACGT 2 cut(s) 584, 739
HpyF10VI GCNNNNNNNGC 2 cut(s) 640, 1433
HpyF3I CTNAG 5 cut(s) 5, 512, 635, 983, 1091
HpySE526I ACGT 2 cut(s) 584, 739
Hsp92I GRCGYC 2 cut(s) 241, 739
HspAI GCGC 1 cut(s) 445
KflI GGGWCCC 1 cut(s) 1301
KroI GCCGGC 1 cut(s) 243
KroNI GCCGGC 1 cut(s) 245
Kzo9I GATC 3 cut(s) 291, 457, 1010
LguI GCTCTTC 1 cut(s) 925
LmnI GCTCC 1 cut(s) 1025
Lsp1109I GCAGC 4 cut(s) 587, 652, 846, 913
LweI GCATC 4 cut(s) 212, 580, 732, 1037
MaeI CTAG 3 cut(s) 533, 708, 1251
MaeII ACGT 2 cut(s) 584, 739
MaeIII GTNAC 7 cut(s) 127, 143, 165, 616, 825, 1033, 1136
MalI GATC 3 cut(s) 293, 459, 1012
MboI GATC 3 cut(s) 291, 457, 1010
MboII GAAGA 8 cut(s) 25, 474, 538, 818, 843, 912, 1055, 1346
MfeI CAATTG 1 cut(s) 995
MflI RGATCY 3 cut(s) 291, 457, 1010
MhlI GDGCHC 1 cut(s) 630
MlsI TGGCCA 1 cut(s) 796
MluCI AATT 6 cut(s) 110, 279, 472, 497, 995, 1238
MluNI TGGCCA 1 cut(s) 796
MlyI GAGTC 2 cut(s) 523, 860
MmeI TCCRAC 1 cut(s) 1049
Mox20I TGGCCA 1 cut(s) 796
Mph1103I ATGCAT 2 cut(s) 1202, 1316
MreI CGCCGGCG 1 cut(s) 243
MroNI GCCGGC 1 cut(s) 243
MroXI GAANNNNTTC 2 cut(s) 266, 835
MscI TGGCCA 1 cut(s) 796
MseI TTAA 5 cut(s) 42, 351, 756, 1050, 1080
MslI CAYNNNNRTG 1 cut(s) 608
Msp20I TGGCCA 1 cut(s) 796
MspA1I CMGCKG 1 cut(s) 926
MspI CCGG 3 cut(s) 157, 244, 1214
MspR9I CCNGG 4 cut(s) 153, 702, 1214, 1306
MunI CAATTG 1 cut(s) 995
MvaI CCWGG 3 cut(s) 153, 702, 1306
MvnI CGCG 3 cut(s) 1125, 1193, 1399
MwoI GCNNNNNNNGC 2 cut(s) 640, 1433
NaeI GCCGGC 1 cut(s) 245
NciI CCSGG 1 cut(s) 1214
NdeII GATC 3 cut(s) 291, 457, 1010
NgoMIV GCCGGC 1 cut(s) 243
NlaIV GGNNCC 3 cut(s) 1302, 1303, 1419
NmuCI GTSAC 4 cut(s) 127, 143, 616, 1136
NruI TCGCGA 1 cut(s) 1399
NsiI ATGCAT 2 cut(s) 1202, 1316
NspI RCATGY 4 cut(s) 607, 1181, 1200, 1314
PaeI GCATGC 1 cut(s) 607
PagI TCATGA 1 cut(s) 693
PciSI GCTCTTC 1 cut(s) 925
PdiI GCCGGC 1 cut(s) 245
PdmI GAANNNNTTC 2 cut(s) 266, 835
PfeI GAWTC 4 cut(s) 697, 836, 1320, 1394
PkrI GCNGC 4 cut(s) 602, 642, 861, 928
PleI GAGTC 2 cut(s) 522, 860
PpsI GAGTC 2 cut(s) 522, 860
PpuMI RGGWCCY 1 cut(s) 1301
Psp5II RGGWCCY 1 cut(s) 1301
Psp6I CCWGG 3 cut(s) 151, 700, 1304
PspEI GGTNACC 1 cut(s) 165
PspGI CCWGG 3 cut(s) 151, 700, 1304
PspN4I GGNNCC 3 cut(s) 1302, 1303, 1419
PspPI GGNCC 3 cut(s) 427, 1301, 1417
PspPPI RGGWCCY 1 cut(s) 1301
PstNI CAGNNNCTG 1 cut(s) 523
PsuI RGATCY 3 cut(s) 291, 457, 1010
PvuII CAGCTG 1 cut(s) 926
RruI TCGCGA 1 cut(s) 1399
RsaI GTAC 6 cut(s) 257, 313, 417, 1223, 1287, 1390
RsaNI GTAC 6 cut(s) 256, 312, 416, 1222, 1286, 1389
RseI CAYNNNNRTG 1 cut(s) 608
SapI GCTCTTC 1 cut(s) 925
SaqAI TTAA 5 cut(s) 42, 351, 756, 1050, 1080
SatI GCNGC 4 cut(s) 601, 641, 860, 927
Sau3AI GATC 3 cut(s) 291, 457, 1010
Sau96I GGNCC 3 cut(s) 427, 1301, 1417
SchI GAGTC 2 cut(s) 523, 860
ScrFI CCNGG 4 cut(s) 153, 702, 1214, 1306
SduI GDGCHC 1 cut(s) 630
SfaNI GCATC 4 cut(s) 212, 580, 732, 1037
SfcI CTRYAG 2 cut(s) 84, 815
SgrAI CRCCGGYG 1 cut(s) 243
SinI GGWCC 3 cut(s) 427, 1301, 1417
SmiMI CAYNNNNRTG 1 cut(s) 608
SphI GCATGC 1 cut(s) 607
Sse9I AATT 6 cut(s) 110, 279, 472, 497, 995, 1238
SspMI CTAG 3 cut(s) 533, 708, 1251
StyD4I CCNGG 4 cut(s) 151, 700, 1212, 1304
StyI CCWWGG 1 cut(s) 1021
TaaI ACNGT 7 cut(s) 78, 819, 1067, 1142, 1280, 1361, 1379
TaiI ACGT 2 cut(s) 587, 742
TaqI TCGA 2 cut(s) 668, 1041
TasI AATT 6 cut(s) 110, 279, 472, 497, 995, 1238
TatI WGTACW 1 cut(s) 1388
TfiI GAWTC 4 cut(s) 697, 836, 1320, 1394
Tru1I TTAA 5 cut(s) 42, 351, 756, 1050, 1080
Tru9I TTAA 5 cut(s) 42, 351, 756, 1050, 1080
TscAI CASTG 2 cut(s) 564, 1095
TseFI GTSAC 4 cut(s) 127, 143, 616, 1136
TseI GCWGC 4 cut(s) 600, 640, 859, 926
Tsp45I GTSAC 4 cut(s) 127, 143, 616, 1136
TspDTI ATGAA 6 cut(s) 221, 474, 485, 828, 867, 1275
TspGWI ACGGA 2 cut(s) 635, 793
TspRI CASTG 2 cut(s) 564, 1095
VpaK11BI GGWCC 3 cut(s) 427, 1301, 1417
XagI CCTNNNNNAGG 1 cut(s) 634
XapI RAATTY 4 cut(s) 279, 472, 497, 1238
XbaI TCTAGA 1 cut(s) 1250
XceI RCATGY 4 cut(s) 607, 1181, 1200, 1314
XcmI CCANNNNNNNNNTGG 1 cut(s) 1312
XmnI GAANNNNTTC 2 cut(s) 266, 835
XspI CTAG 3 cut(s) 533, 708, 1251
ZraI GACGTC 1 cut(s) 740
Zsp2I ATGCAT 2 cut(s) 1202, 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.