Rh2BG340700

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0004522
Physical Location & Seq
Reverse (-)
45459935 .. 45464273
4339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG340700.1

Sequence Viewer

Length: 1098 bp
ATGCTGAGTGCAATATCAAAAGAAGAGTTCCTCTTCCTTGTTAAGAAGTATTATGATATTCTCACTGTTGCACTACTGTTTTCTATCGGAGTTGCATTTTTCGTCTCTAAATTAGCATGGAGAAAGGTCACAGGTTCCAGAGGTCACATCCCTGGCCGGTTGGGGTTACCCTTTATTGGTGAAACCATTTCTTTTATGTCAGCAACCAATAGCACAAGAGGATGCTATGATTTTATCAGATTCCGGCGAATATGGTATGGGAAGTGGTTCAAGACGAGAATTTTTGGCAAGATCCATGTGTTTGTTCCAAGTACAGAGGGTGCAAAAATGATATTTTCTAATGATTTTGCTAAGTTCAACAAAGGATATGTGAAATCAATGGCAGATTGTATTGGAGATAAAAGCTTGCTCTGTGTACCACATGAGAACCATAAAAGAATAAGGCGCTTATTATCAGATCCTTTCTCCATGAATTCTTTATCTTCGTTCATTGAGAAATTCGATAGAATGCTGTGTCAGAAGCTGAAGAAACTAGAACAAGGTGGGAAAAGCTTTTCGGTGCTTGACTTCAGTATGAGGATGACATTTGATGCGATGTGCTGCATGCTAATGAGTGTCATGGATGAGCCCTTGCTAAGGCAGCTTGAGAAAGACTGCACTGCAGTCTCGGATGGAATCTTATCTGTTCCTGTCATGATTCCAGGCACTAGATATTACAAAGGCATCAAGGCACGCAGACGTCTCATGGAAACCTTTAAAGACATGATTGCCAGAAGAAGGAGTGGGAAGGAGTTGCCAGAACCAGAAGATTTCCTACAGTCCATGTTGCGAAGAGACTCATACCCTCCCAATGAAAAGCTGCAAGACTCAGAAATCATGGACAACCTAATGACACTTATAATTGCAGGGCAGACGACCACTTCAGCTGCAATGATGTGGAGTGTCAAGTTTCTGGATGAGAACCAACAAGTCCAAGACATTCTTAGGGAGGAACAATTGTCTATAGCCACATCCAAGCCCGAAGGAGCATCAATTACCCTTGAAGATATTAATAATATGTCCTACTGTTGGAAGGTAATGAGCTTGGATTTAGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00830 ko01100 map00830 map01100
Pfam Domains
Protein Families
p450

Protein Analysis

365

Amino Acids

41.92

Weight (kDa)

9.2

Isoelectric Point (pI)

52.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 55 - 359 3.2e-26 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 899
AatII GACGTC 1 cut(s) 742
AclWI GGATC 2 cut(s) 286, 452
AcoI YGGCCR 1 cut(s) 154
AcsI RAATTY 3 cut(s) 279, 472, 497
AcuI CTGAAG 3 cut(s) 545, 553, 906
AcyI GRCGYC 1 cut(s) 739
AfaI GTAC 2 cut(s) 313, 417
AfiI CCNNNNNNNGG 4 cut(s) 176, 636, 777, 1068
AgsI TTSAA 3 cut(s) 271, 358, 1043
AjnI CCWGG 2 cut(s) 151, 700
AluBI AGCT 7 cut(s) 405, 523, 552, 643, 859, 926, 1083
AluI AGCT 7 cut(s) 405, 523, 552, 643, 859, 926, 1083
Alw26I GTCTC 4 cut(s) 109, 670, 746, 828
AlwI GGATC 2 cut(s) 286, 452
AlwNI CAGNNNCTG 1 cut(s) 523
AoxI GGCC 1 cut(s) 154
ApeKI GCWGC 4 cut(s) 600, 640, 859, 926
ApoI RAATTY 3 cut(s) 279, 472, 497
AseI ATTAAT 1 cut(s) 1050
Asp700I GAANNNNTTC 1 cut(s) 266
AspLEI GCGC 1 cut(s) 447
AsuHPI GGTGA 1 cut(s) 191
BanII GRGCYC 1 cut(s) 630
BarI GAAGNNNNNNTAC 2 cut(s) 798, 830
BbvI GCAGC 4 cut(s) 587, 652, 846, 913
BccI CCATC 1 cut(s) 665
BciT130I CCWGG 2 cut(s) 153, 702
BcoDI GTCTC 4 cut(s) 109, 670, 746, 828
BfaI CTAG 2 cut(s) 533, 708
BfmI CTRYAG 3 cut(s) 660, 815, 1002
BfoI RGCGCY 1 cut(s) 448
BisI GCNGC 4 cut(s) 601, 641, 860, 927
BlsI GCNGC 4 cut(s) 602, 642, 861, 928
Bme1390I CCNGG 2 cut(s) 153, 702
BmiI GGNNCC 1 cut(s) 136
BmrFI CCNGG 2 cut(s) 153, 702
BmsI GCATC 4 cut(s) 212, 580, 732, 1037
Bpu10I CCTNAGC 1 cut(s) 635
BpuEI CTTGAG 1 cut(s) 665
BsaHI GRCGYC 1 cut(s) 739
BsaJI CCNNGG 1 cut(s) 151
Bsc4I CCNNNNNNNGG 4 cut(s) 176, 636, 777, 1068
Bse118I RCCGGY 1 cut(s) 156
Bse3DI GCAATG 1 cut(s) 936
BseBI CCWGG 2 cut(s) 153, 702
BseDI CCNNGG 1 cut(s) 151
BseGI GGATG 7 cut(s) 147, 227, 585, 628, 676, 961, 1010
BseLI CCNNNNNNNGG 4 cut(s) 176, 636, 777, 1068
BseMI GCAATG 1 cut(s) 936
BseMII CTCAG 1 cut(s) 882
BseXI GCAGC 4 cut(s) 587, 652, 846, 913
BsgI GTGCAG 1 cut(s) 640
BshFI GGCC 1 cut(s) 156
BsiSI CCGG 2 cut(s) 157, 244
BslI CCNNNNNNNGG 4 cut(s) 176, 636, 777, 1068
BsmAI GTCTC 4 cut(s) 109, 670, 746, 828
BsmBI CGTCTC 2 cut(s) 109, 746
BsmI GAATGC 1 cut(s) 513
BsnI GGCC 1 cut(s) 156
Bsp1286I GDGCHC 1 cut(s) 630
Bsp143I GATC 2 cut(s) 291, 457
BspANI GGCC 1 cut(s) 156
BspCNI CTCAG 1 cut(s) 881
BspHI TCATGA 1 cut(s) 693
BspLI GGNNCC 1 cut(s) 136
BspMAI CTGCAG 1 cut(s) 664
BspPI GGATC 2 cut(s) 286, 452
BsrDI GCAATG 1 cut(s) 936
BsrFI RCCGGY 1 cut(s) 156
BssAI RCCGGY 1 cut(s) 156
BssECI CCNNGG 1 cut(s) 151
BssMI GATC 2 cut(s) 291, 457
BssNI GRCGYC 1 cut(s) 739
Bst2UI CCWGG 2 cut(s) 153, 702
Bst4CI ACNGT 4 cut(s) 67, 78, 819, 1067
Bst6I CTCTTC 3 cut(s) 18, 38, 826
BstACI GRCGYC 1 cut(s) 739
BstC8I GCNNGC 3 cut(s) 407, 605, 733
BstDEI CTNAG 5 cut(s) 5, 351, 635, 868, 983
BstEII GGTNACC 1 cut(s) 165
BstENI CCTNNNNNAGG 1 cut(s) 634
BstF5I GGATG 7 cut(s) 147, 227, 585, 628, 676, 961, 1010
BstH2I RGCGCY 1 cut(s) 448
BstHHI GCGC 1 cut(s) 447
BstKTI GATC 2 cut(s) 294, 460
BstMAI GTCTC 4 cut(s) 109, 670, 746, 828
BstMBI GATC 2 cut(s) 291, 457
BstMWI GCNNNNNNNGC 1 cut(s) 640
BstNI CCWGG 2 cut(s) 153, 702
BstNSI RCATGY 1 cut(s) 607
BstPI GGTNACC 1 cut(s) 165
BstSCI CCNGG 2 cut(s) 151, 700
BstSFI CTRYAG 3 cut(s) 660, 815, 1002
BstV1I GCAGC 4 cut(s) 587, 652, 846, 913
BstX2I RGATCY 2 cut(s) 291, 457
BstYI RGATCY 2 cut(s) 291, 457
BsuRI GGCC 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 608
BtsCI GGATG 7 cut(s) 147, 227, 585, 628, 676, 961, 1010
BtsI GCAGTG 1 cut(s) 657
BtsIMutI CAGTG 2 cut(s) 63, 657
Cac8I GCNNGC 3 cut(s) 407, 605, 733
CaiI CAGNNNCTG 1 cut(s) 523
CciI TCATGA 1 cut(s) 693
CfoI GCGC 1 cut(s) 447
Cfr10I RCCGGY 1 cut(s) 156
Csp6I GTAC 2 cut(s) 312, 416
CviQI GTAC 2 cut(s) 312, 416
DdeI CTNAG 5 cut(s) 5, 351, 635, 868, 983
DpnI GATC 2 cut(s) 293, 459
DpnII GATC 2 cut(s) 291, 457
DraI TTTAAA 1 cut(s) 757
EaeI YGGCCR 1 cut(s) 154
Eam1104I CTCTTC 3 cut(s) 18, 38, 826
EarI CTCTTC 3 cut(s) 18, 38, 826
Eco24I GRGCYC 1 cut(s) 630
Eco57I CTGAAG 3 cut(s) 545, 553, 906
Eco91I GGTNACC 1 cut(s) 165
EcoNI CCTNNNNNAGG 1 cut(s) 634
EcoO65I GGTNACC 1 cut(s) 165
EcoRI GAATTC 1 cut(s) 472
EcoRII CCWGG 2 cut(s) 151, 700
EcoT38I GRGCYC 1 cut(s) 630
Esp3I CGTCTC 2 cut(s) 109, 746
FalI AAGNNNNNCTT 2 cut(s) 966, 998
Fnu4HI GCNGC 4 cut(s) 601, 641, 860, 927
FokI GGATG 7 cut(s) 134, 234, 592, 635, 683, 968, 997
FriOI GRGCYC 1 cut(s) 630
Fsp4HI GCNGC 4 cut(s) 601, 641, 860, 927
FspBI CTAG 2 cut(s) 533, 708
GlaI GCGC 1 cut(s) 446
GluI GCNGC 4 cut(s) 601, 641, 860, 927
HaeII RGCGCY 1 cut(s) 448
HaeIII GGCC 1 cut(s) 156
HapII CCGG 2 cut(s) 157, 244
HhaI GCGC 1 cut(s) 447
Hin1I GRCGYC 1 cut(s) 739
Hin6I GCGC 1 cut(s) 445
HinP1I GCGC 1 cut(s) 445
HindIII AAGCTT 2 cut(s) 403, 550
HinfI GANTC 5 cut(s) 240, 675, 697, 836, 866
HpaII CCGG 2 cut(s) 157, 244
HphI GGTGA 1 cut(s) 191
Hpy166II GTNNAC 1 cut(s) 416
Hpy188I TCNGA 6 cut(s) 89, 239, 457, 519, 670, 871
Hpy188III TCNNGA 4 cut(s) 138, 271, 694, 953
Hpy8I GTNNAC 1 cut(s) 416
HpyAV CCTTC 4 cut(s) 771, 781, 1016, 1066
HpyCH4III ACNGT 4 cut(s) 67, 78, 819, 1067
HpyCH4IV ACGT 1 cut(s) 739
HpyF10VI GCNNNNNNNGC 1 cut(s) 640
HpyF3I CTNAG 5 cut(s) 5, 351, 635, 868, 983
HpySE526I ACGT 1 cut(s) 739
Hsp92I GRCGYC 1 cut(s) 739
HspAI GCGC 1 cut(s) 445
Kzo9I GATC 2 cut(s) 291, 457
LmnI GCTCC 1 cut(s) 1025
Lsp1109I GCAGC 4 cut(s) 587, 652, 846, 913
LweI GCATC 4 cut(s) 212, 580, 732, 1037
MaeI CTAG 2 cut(s) 533, 708
MaeII ACGT 1 cut(s) 739
MaeIII GTNAC 3 cut(s) 127, 143, 165
MalI GATC 2 cut(s) 293, 459
MboI GATC 2 cut(s) 291, 457
MboII GAAGA 8 cut(s) 25, 35, 474, 538, 786, 818, 843, 1055
MfeI CAATTG 1 cut(s) 995
MflI RGATCY 2 cut(s) 291, 457
MhlI GDGCHC 1 cut(s) 630
MluCI AATT 7 cut(s) 110, 279, 472, 497, 900, 995, 1032
MlyI GAGTC 2 cut(s) 830, 860
MmeI TCCRAC 1 cut(s) 1049
MnlI CCTC 7 cut(s) 41, 134, 212, 310, 570, 855, 982
MroXI GAANNNNTTC 1 cut(s) 266
MseI TTAA 3 cut(s) 42, 756, 1050
MslI CAYNNNNRTG 1 cut(s) 608
MspA1I CMGCKG 1 cut(s) 926
MspI CCGG 2 cut(s) 157, 244
MspR9I CCNGG 2 cut(s) 153, 702
MunI CAATTG 1 cut(s) 995
Mva1269I GAATGC 1 cut(s) 513
MvaI CCWGG 2 cut(s) 153, 702
MwoI GCNNNNNNNGC 1 cut(s) 640
NdeII GATC 2 cut(s) 291, 457
NlaIV GGNNCC 1 cut(s) 136
NmuCI GTSAC 2 cut(s) 127, 143
NspI RCATGY 1 cut(s) 607
PaeI GCATGC 1 cut(s) 607
PagI TCATGA 1 cut(s) 693
PctI GAATGC 1 cut(s) 513
PdmI GAANNNNTTC 1 cut(s) 266
PfeI GAWTC 3 cut(s) 240, 675, 697
PkrI GCNGC 4 cut(s) 602, 642, 861, 928
PleI GAGTC 2 cut(s) 830, 860
PpsI GAGTC 2 cut(s) 830, 860
PshBI ATTAAT 1 cut(s) 1050
PsiI TTATAA 1 cut(s) 899
Psp6I CCWGG 2 cut(s) 151, 700
PspEI GGTNACC 1 cut(s) 165
PspGI CCWGG 2 cut(s) 151, 700
PspN4I GGNNCC 1 cut(s) 136
PstI CTGCAG 1 cut(s) 664
PstNI CAGNNNCTG 1 cut(s) 523
PsuI RGATCY 2 cut(s) 291, 457
PvuII CAGCTG 1 cut(s) 926
RsaI GTAC 2 cut(s) 313, 417
RsaNI GTAC 2 cut(s) 312, 416
RseI CAYNNNNRTG 1 cut(s) 608
SaqAI TTAA 3 cut(s) 42, 756, 1050
SatI GCNGC 4 cut(s) 601, 641, 860, 927
Sau3AI GATC 2 cut(s) 291, 457
SchI GAGTC 2 cut(s) 830, 860
ScrFI CCNGG 2 cut(s) 153, 702
SduI GDGCHC 1 cut(s) 630
SfaNI GCATC 4 cut(s) 212, 580, 732, 1037
SfcI CTRYAG 3 cut(s) 660, 815, 1002
SmiMI CAYNNNNRTG 1 cut(s) 608
SmlI CTYRAG 1 cut(s) 644
SmoI CTYRAG 1 cut(s) 644
SphI GCATGC 1 cut(s) 607
Sse9I AATT 7 cut(s) 110, 279, 472, 497, 900, 995, 1032
SspMI CTAG 2 cut(s) 533, 708
StyD4I CCNGG 2 cut(s) 151, 700
TaaI ACNGT 4 cut(s) 67, 78, 819, 1067
TaiI ACGT 1 cut(s) 742
TaqI TCGA 1 cut(s) 501
TasI AATT 7 cut(s) 110, 279, 472, 497, 900, 995, 1032
TatI WGTACW 1 cut(s) 311
TfiI GAWTC 3 cut(s) 240, 675, 697
Tru1I TTAA 3 cut(s) 42, 756, 1050
Tru9I TTAA 3 cut(s) 42, 756, 1050
TscAI CASTG 2 cut(s) 70, 664
TseFI GTSAC 2 cut(s) 127, 143
TseI GCWGC 4 cut(s) 600, 640, 859, 926
Tsp45I GTSAC 2 cut(s) 127, 143
TspDTI ATGAA 3 cut(s) 478, 485, 867
TspRI CASTG 2 cut(s) 70, 664
VspI ATTAAT 1 cut(s) 1050
XagI CCTNNNNNAGG 1 cut(s) 634
XapI RAATTY 3 cut(s) 279, 472, 497
XceI RCATGY 1 cut(s) 607
XmnI GAANNNNTTC 1 cut(s) 266
XspI CTAG 2 cut(s) 533, 708
ZraI GACGTC 1 cut(s) 740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.