RchiOBHm_Chr2g0111931

Hyccin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0014272
Physical Location & Seq
Forward (+)
23670347 .. 23672410
2064 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48547

Sequence Viewer

Length: 1605 bp
ATGCCGATAGAGTTACAACCGAAGTTCGAATCTCTCAAACTAGTCATTTGCCACAATAGGAAAAACCAAAAGAAGGGAGAGATTAAATTCCCAAGAACTCGCGAAGACCATCTTCTTCTTCCACTCCCTTTCTCCGGACTTCAGCTCCGATCTCTGACCCAGACCCACCCTTGTGGAAAAGAAGAAGACTCCGCAATCTCCACTCTCCCAGATCCACCCACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCAAACCCAAATTCACCATGGACCTCTACCCAAATCACAGCACCAACTCCCCCACCTCCTCCGCCTCCTCCACCGCCACCAACCCAAACCCAAACCCCAGACCCACCCGCAACACCATCTCCTCCCTCACCGCCACCGACGACGACCCAATGCACTCCTGGTGGGAGTCCATCTCCAAAGCCCGCTCCCGCATCCACTCCCTCGCCACTCTCCTCGACCCTTCTCTCTCCTCCTCCCTCTCCTCCCTCGCCGACTCCGACCGCCCCGCCCTCTCTCTCCTCTCCTCCCTCGAAGCCTACGCCGCCGTTTCCGCCGTCCTCTCCGGCCCCCTCTCCGGCTCCGGATCCGACCCGCTCTGCAACTGGCTCTACGACACCTTCCTCTCCTCCGACCCCCATCTACGACTCGTCGTTTTCTCCTTCCTCCCTCTCCTCGCCGGCCTCTATCTCTCCCGCATCCACTCTCTCTCCTCTGACTCTCTTACCTCGCTTCCCTCCCTCGCCGGCTTTGAGGCCGTGCTCCTCGCTCTCTACGCCGCCGAGACCAAGGCCCGAAACGGCAAGCCCATTGTCGTTTCGATCCCAGACCTATCTCAGCCCTCTCTCTACCACGTTCCTCGAAGCCAGAAGACGACTAATCCCAACTCCAATTCCAGTAATATCCAATCCGTTGGGGTTTTGTCGCCGCCGCTGGAGCCCCAGGTCGCGGTCAAGTCAACCAAACGGGCCTGCATTGTGGGAGTTGCGCTGGATTCTTATTACAAGCACATTTCGCAGATGCCCACTTGGTCCAAGATGGATTTTTGCAGGTTCCTAGCTTCTTGGGCCGGCCCGGATTGCTCTTGTCAGCGGCAATTTGAATCCGGTGATAACCACAGTGAGCCAGAGATTGCTGGGTTCTTGGAGGCCGGTGATGGGAATGGGAGTGGTAATGAGAGTGAGATTGAGATTGAGGGTGATGTGGCGGAAGAAATGGGTCAACTAAGAATTGAGCAAAATGGGATCAGCAGTGGGGTCAGTCATGTGGAGGACTCAAAGGGGGCGAAGATTCCATTGCCGTGGGAGCTTTTGCAGCCAGCGCTGCGAATATTGGGGCATTGTTTGTTGGCGCCGTTGAATTCTCAGGAGGTTAAGGACGCTGCTTCCATTGCGGTGAGGAGATTGTATGCCAGGGCATCTCATGATTTGGTGCCGCAGGCGATTTTAGCTACTCAGAGTCTCATTCAGCTTGATAACAGGGGGCGTGAGGCAGCCAAGGATGCAGTGGCGGTTGCTGCTAATTCATCTTCGAATGTTAACACGCCGAGCAAAGCTAAGAAACCTGAAATCCTTTTGGTCTCAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Hyccin

Protein Analysis

534

Amino Acids

57.59

Weight (kDa)

6.32

Isoelectric Point (pI)

54.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hyccin PF09790 171 - 496 8.2e-60 Hyccin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014272)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G64090
fragaria_vesca FvH4_1g19990
malus_domestica MD05G1042400.v1.1 MD10G1049000.v1.1
prunus_persica Prupe.8G059200_v2.0.a1
pyrus_communis pycom05g03500
rosa_chinensis RchiOBHm_Chr2g0111931
rosa_laevigata RLG00000017939 RLG00000034552
rosa_multiflora Rmu_sc0005679.1_g000010
rosa_roxburghii Rroxscaffold_2G00131980
rosa_rugosa Rorug02G0177300
rosa_samantha Rh2AG229700 Rh2BG242400 Rh2CG233800 Rh2DG237400
rosa_wichuraiana Rw2G017770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1056
AccB1I GGYRCC 2 cut(s) 1366, 1447
AccBSI CCGCTC 2 cut(s) 444, 613
AccII CGCG 2 cut(s) 102, 965
AccIII TCCGGA 2 cut(s) 134, 599
AclWI GGATC 5 cut(s) 206, 597, 610, 832, 1268
AcsI RAATTY 3 cut(s) 86, 269, 1375
AcuI CTGAAG 1 cut(s) 125
AcyI GRCGYC 1 cut(s) 1367
AfeI AGCGCT 1 cut(s) 1338
AfiI CCNNNNNNNGG 5 cut(s) 73, 134, 593, 964, 1173
AgsI TTSAA 2 cut(s) 1118, 1375
AhlI ACTAGT 1 cut(s) 40
AjnI CCWGG 3 cut(s) 416, 957, 1427
AleI CACNNNNGTG 1 cut(s) 171
AluBI AGCT 6 cut(s) 145, 1076, 1324, 1466, 1486, 1571
AluI AGCT 6 cut(s) 145, 1076, 1324, 1466, 1486, 1571
Alw21I GWGCWC 1 cut(s) 780
Alw26I GTCTC 3 cut(s) 794, 1481, 1600
AlwI GGATC 5 cut(s) 206, 597, 610, 832, 1268
Aor13HI TCCGGA 2 cut(s) 134, 599
Aor51HI AGCGCT 1 cut(s) 1338
AoxI GGCC 8 cut(s) 583, 697, 771, 807, 984, 1083, 1087, 1164
ApeKI GCWGC 5 cut(s) 1330, 1339, 1397, 1508, 1532
ApoI RAATTY 3 cut(s) 86, 269, 1375
AspLEI GCGC 3 cut(s) 1006, 1339, 1369
AspS9I GGNCC 7 cut(s) 280, 584, 808, 984, 1047, 1083, 1088
AsuC2I CCSGG 1 cut(s) 1091
AsuHPI GGTGA 6 cut(s) 265, 379, 1136, 1181, 1226, 1423
AsuII TTCGAA 2 cut(s) 27, 1547
AvaII GGWCC 2 cut(s) 280, 1047
BamHI GGATCC 1 cut(s) 602
BanI GGYRCC 2 cut(s) 1366, 1447
BanII GRGCYC 1 cut(s) 957
BbsI GAAGAC 3 cut(s) 111, 192, 893
Bbv12I GWGCWC 1 cut(s) 780
BbvI GCAGC 5 cut(s) 1326, 1342, 1384, 1519, 1520
BccI CCATC 6 cut(s) 117, 383, 437, 663, 1048, 1166
BceAI ACGGC 6 cut(s) 548, 557, 758, 832, 1300, 1354
BciT130I CCWGG 3 cut(s) 418, 959, 1429
BcnI CCSGG 1 cut(s) 1091
BcoDI GTCTC 3 cut(s) 794, 1481, 1600
BcuI ACTAGT 1 cut(s) 40
BfaI CTAG 2 cut(s) 41, 1073
BfoI RGCGCY 2 cut(s) 1340, 1370
BfuAI ACCTGC 1 cut(s) 1056
Bme1390I CCNGG 4 cut(s) 418, 959, 1091, 1429
Bme18I GGWCC 2 cut(s) 280, 1047
BmgT120I GGNCC 7 cut(s) 280, 584, 808, 984, 1047, 1083, 1088
BmiI GGNNCC 7 cut(s) 586, 598, 604, 954, 1070, 1368, 1449
BmrFI CCNGG 4 cut(s) 418, 959, 1091, 1429
BmsI GCATC 5 cut(s) 459, 723, 1026, 1442, 1507
BpiI GAAGAC 3 cut(s) 111, 192, 893
BplI GAGNNNNNCTC 2 cut(s) 416, 448
BpmI CTGGAG 1 cut(s) 971
Bpu14I TTCGAA 2 cut(s) 27, 1547
BpuMI CCSGG 1 cut(s) 1091
BsaHI GRCGYC 1 cut(s) 1367
BsaI GGTCTC 2 cut(s) 794, 1600
BsaJI CCNNGG 6 cut(s) 276, 804, 957, 1316, 1428, 1512
BsaWI WCCGGW 3 cut(s) 134, 599, 1121
BsaXI ACNNNNNCTCC 6 cut(s) 129, 159, 362, 392, 710, 740
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 134, 593, 964, 1173
Bse118I RCCGGY 4 cut(s) 695, 761, 1085, 1166
Bse1I ACTGG 2 cut(s) 626, 912
Bse3DI GCAATG 2 cut(s) 1310, 1404
BseAI TCCGGA 2 cut(s) 134, 599
BseBI CCWGG 3 cut(s) 418, 959, 1429
BseDI CCNNGG 6 cut(s) 276, 804, 957, 1316, 1428, 1512
BseGI GGATG 3 cut(s) 450, 714, 1522
BseLI CCNNNNNNNGG 5 cut(s) 73, 134, 593, 964, 1173
BseMI GCAATG 2 cut(s) 1310, 1404
BseMII CTCAG 4 cut(s) 270, 866, 1394, 1484
BseNI ACTGG 2 cut(s) 626, 912
BseXI GCAGC 5 cut(s) 1326, 1342, 1384, 1519, 1520
BseYI CCCAGC 1 cut(s) 1151
Bsh1236I CGCG 2 cut(s) 102, 965
Bsh1285I CGRYCG 1 cut(s) 520
BshFI GGCC 8 cut(s) 585, 699, 773, 809, 986, 1085, 1089, 1166
BshNI GGYRCC 2 cut(s) 1366, 1447
BsiEI CGRYCG 1 cut(s) 520
BsiHKAI GWGCWC 1 cut(s) 780
BslI CCNNNNNNNGG 5 cut(s) 73, 134, 593, 964, 1173
BsmAI GTCTC 3 cut(s) 794, 1481, 1600
BsnI GGCC 8 cut(s) 585, 699, 773, 809, 986, 1085, 1089, 1166
Bso31I GGTCTC 2 cut(s) 794, 1600
Bsp119I TTCGAA 2 cut(s) 27, 1547
Bsp1286I GDGCHC 2 cut(s) 780, 957
Bsp13I TCCGGA 2 cut(s) 134, 599
Bsp143I GATC 5 cut(s) 149, 211, 602, 837, 1260
Bsp19I CCATGG 1 cut(s) 276
Bsp68I TCGCGA 1 cut(s) 102
BspANI GGCC 8 cut(s) 585, 699, 773, 809, 986, 1085, 1089, 1166
BspCNI CTCAG 4 cut(s) 269, 865, 1393, 1483
BspEI TCCGGA 2 cut(s) 134, 599
BspFNI CGCG 2 cut(s) 102, 965
BspHI TCATGA 1 cut(s) 1438
BspLI GGNNCC 7 cut(s) 586, 598, 604, 954, 1070, 1368, 1449
BspMI ACCTGC 1 cut(s) 1056
BspPI GGATC 5 cut(s) 206, 597, 610, 832, 1268
BspT104I TTCGAA 2 cut(s) 27, 1547
BspT107I GGYRCC 2 cut(s) 1366, 1447
BspTNI GGTCTC 2 cut(s) 794, 1600
BsrBI CCGCTC 2 cut(s) 444, 613
BsrDI GCAATG 2 cut(s) 1310, 1404
BsrFI RCCGGY 4 cut(s) 695, 761, 1085, 1166
BsrI ACTGG 2 cut(s) 626, 912
BssAI RCCGGY 4 cut(s) 695, 761, 1085, 1166
BssECI CCNNGG 6 cut(s) 276, 804, 957, 1316, 1428, 1512
BssMI GATC 5 cut(s) 149, 211, 602, 837, 1260
BssNI GRCGYC 1 cut(s) 1367
BssT1I CCWWGG 3 cut(s) 276, 804, 1512
Bst2UI CCWGG 3 cut(s) 418, 959, 1429
Bst4CI ACNGT 1 cut(s) 1136
BstACI GRCGYC 1 cut(s) 1367
BstBI TTCGAA 2 cut(s) 27, 1547
BstC8I GCNNGC 8 cut(s) 442, 697, 763, 821, 988, 1087, 1335, 1455
BstDEI CTNAG 6 cut(s) 256, 852, 1241, 1380, 1470, 1572
BstDSI CCRYGG 2 cut(s) 276, 1316
BstF5I GGATG 3 cut(s) 450, 714, 1522
BstFNI CGCG 2 cut(s) 102, 965
BstH2I RGCGCY 2 cut(s) 1340, 1370
BstHHI GCGC 3 cut(s) 1006, 1339, 1369
BstKTI GATC 5 cut(s) 152, 214, 605, 840, 1263
BstMAI GTCTC 3 cut(s) 794, 1481, 1600
BstMBI GATC 5 cut(s) 149, 211, 602, 837, 1260
BstMCI CGRYCG 1 cut(s) 520
BstNI CCWGG 3 cut(s) 418, 959, 1429
BstSCI CCNGG 4 cut(s) 416, 957, 1089, 1427
BstUI CGCG 2 cut(s) 102, 965
BstV1I GCAGC 5 cut(s) 1326, 1342, 1384, 1519, 1520
BstV2I GAAGAC 3 cut(s) 111, 192, 893
BstX2I RGATCY 2 cut(s) 211, 602
BstXI CCANNNNNNTGG 3 cut(s) 173, 929, 1317
BstYI RGATCY 2 cut(s) 211, 602
BsuRI GGCC 8 cut(s) 585, 699, 773, 809, 986, 1085, 1089, 1166
BtgI CCRYGG 2 cut(s) 276, 1316
BtsCI GGATG 3 cut(s) 450, 714, 1522
BtsI GCAGTG 2 cut(s) 1273, 1527
BtsIMutI CAGTG 3 cut(s) 1141, 1273, 1527
BtuMI TCGCGA 1 cut(s) 102
BveI ACCTGC 1 cut(s) 1056
Cac8I GCNNGC 8 cut(s) 442, 697, 763, 821, 988, 1087, 1335, 1455
CciI TCATGA 1 cut(s) 1438
CfoI GCGC 3 cut(s) 1006, 1339, 1369
Cfr10I RCCGGY 4 cut(s) 695, 761, 1085, 1166
Cfr13I GGNCC 7 cut(s) 280, 584, 808, 984, 1047, 1083, 1088
CseI GACGC 1 cut(s) 1403
CviAII CATG 3 cut(s) 277, 1280, 1439
DdeI CTNAG 6 cut(s) 256, 852, 1241, 1380, 1470, 1572
DinI GGCGCC 1 cut(s) 1368
DpnI GATC 5 cut(s) 151, 213, 604, 839, 1262
DpnII GATC 5 cut(s) 149, 211, 602, 837, 1260
EciI GGCGGA 3 cut(s) 310, 559, 1238
Eco130I CCWWGG 3 cut(s) 276, 804, 1512
Eco24I GRGCYC 1 cut(s) 957
Eco31I GGTCTC 2 cut(s) 794, 1600
Eco47I GGWCC 2 cut(s) 280, 1047
Eco47III AGCGCT 1 cut(s) 1338
Eco57I CTGAAG 1 cut(s) 125
EcoRI GAATTC 1 cut(s) 1375
EcoRII CCWGG 3 cut(s) 416, 957, 1427
EcoT14I CCWWGG 3 cut(s) 276, 804, 1512
EcoT38I GRGCYC 1 cut(s) 957
EgeI GGCGCC 1 cut(s) 1368
EheI GGCGCC 1 cut(s) 1368
ErhI CCWWGG 3 cut(s) 276, 804, 1512
FaeI CATG 3 cut(s) 280, 1283, 1442
FaiI YATR 4 cut(s) 278, 1281, 1425, 1440
FalI AAGNNNNNCTT 2 cut(s) 96, 128
FatI CATG 3 cut(s) 276, 1279, 1438
FauI CCCGC 6 cut(s) 374, 449, 455, 532, 618, 719
FokI GGATG 3 cut(s) 437, 701, 1529
FriOI GRGCYC 1 cut(s) 957
FseI GGCCGGCC 1 cut(s) 1089
FspBI CTAG 2 cut(s) 41, 1073
GlaI GCGC 3 cut(s) 1005, 1338, 1368
GsaI CCCAGC 1 cut(s) 1155
GsuI CTGGAG 1 cut(s) 971
HaeII RGCGCY 2 cut(s) 1340, 1370
HaeIII GGCC 8 cut(s) 585, 699, 773, 809, 986, 1085, 1089, 1166
HgaI GACGC 1 cut(s) 1403
HhaI GCGC 3 cut(s) 1006, 1339, 1369
Hin1I GRCGYC 1 cut(s) 1367
Hin1II CATG 3 cut(s) 280, 1283, 1442
Hin6I GCGC 3 cut(s) 1004, 1337, 1367
HinP1I GCGC 3 cut(s) 1004, 1337, 1367
HincII GTYRAC 3 cut(s) 975, 1238, 1555
HindII GTYRAC 3 cut(s) 975, 1238, 1555
HpaI GTTAAC 1 cut(s) 1555
HphI GGTGA 6 cut(s) 265, 379, 1136, 1181, 1226, 1423
Hpy166II GTNNAC 3 cut(s) 975, 1238, 1555
Hpy188I TCNGA 7 cut(s) 149, 156, 517, 607, 649, 733, 1473
Hpy188III TCNNGA 5 cut(s) 101, 135, 600, 1382, 1439
Hpy8I GTNNAC 3 cut(s) 975, 1238, 1555
Hpy99I CGWCG 3 cut(s) 401, 404, 671
HpyAV CCTTC 4 cut(s) 67, 489, 646, 688
HpyCH4III ACNGT 1 cut(s) 1136
HpyCH4IV ACGT 1 cut(s) 870
HpyCH4V TGCA 6 cut(s) 412, 618, 990, 1065, 1330, 1520
HpyF3I CTNAG 6 cut(s) 256, 852, 1241, 1380, 1470, 1572
HpySE526I ACGT 1 cut(s) 870
Hsp92I GRCGYC 1 cut(s) 1367
Hsp92II CATG 3 cut(s) 280, 1283, 1442
HspAI GCGC 3 cut(s) 1004, 1337, 1367
KasI GGCGCC 1 cut(s) 1366
Kpn2I TCCGGA 2 cut(s) 134, 599
KroI GCCGGC 3 cut(s) 695, 761, 1085
KroNI GCCGGC 3 cut(s) 697, 763, 1087
KspAI GTTAAC 1 cut(s) 1555
Kzo9I GATC 5 cut(s) 149, 211, 602, 837, 1260
LmnI GCTCC 6 cut(s) 150, 449, 602, 783, 952, 1321
Lsp1109I GCAGC 5 cut(s) 1326, 1342, 1384, 1519, 1520
LweI GCATC 5 cut(s) 459, 723, 1026, 1442, 1507
MaeI CTAG 2 cut(s) 41, 1073
MaeII ACGT 1 cut(s) 870
MaeIII GTNAC 1 cut(s) 12
MalI GATC 5 cut(s) 151, 213, 604, 839, 1262
MbiI CCGCTC 2 cut(s) 444, 613
MboI GATC 5 cut(s) 149, 211, 602, 837, 1260
MflI RGATCY 2 cut(s) 211, 602
MhlI GDGCHC 2 cut(s) 780, 957
MluCI AATT 7 cut(s) 86, 269, 907, 1112, 1245, 1375, 1537
Mly113I GGCGCC 1 cut(s) 1367
MlyI GAGTC 7 cut(s) 182, 434, 506, 657, 728, 1283, 1483
MmeI TCCRAC 3 cut(s) 540, 630, 672
MroI TCCGGA 2 cut(s) 134, 599
MroNI GCCGGC 3 cut(s) 695, 761, 1085
MseI TTAA 3 cut(s) 84, 1389, 1554
MslI CAYNNNNRTG 3 cut(s) 171, 1315, 1409
MspA1I CMGCKG 2 cut(s) 949, 1108
MspR9I CCNGG 4 cut(s) 418, 959, 1091, 1429
MvaI CCWGG 3 cut(s) 418, 959, 1429
MvnI CGCG 2 cut(s) 102, 965
NaeI GCCGGC 3 cut(s) 697, 763, 1087
NarI GGCGCC 1 cut(s) 1367
NciI CCSGG 1 cut(s) 1091
NcoI CCATGG 1 cut(s) 276
NdeII GATC 5 cut(s) 149, 211, 602, 837, 1260
NgoMIV GCCGGC 3 cut(s) 695, 761, 1085
NlaIII CATG 3 cut(s) 280, 1283, 1442
NlaIV GGNNCC 7 cut(s) 586, 598, 604, 954, 1070, 1368, 1449
NmeAIII GCCGAG 2 cut(s) 823, 1587
NruI TCGCGA 1 cut(s) 102
NspV TTCGAA 2 cut(s) 27, 1547
OliI CACNNNNGTG 1 cut(s) 171
PagI TCATGA 1 cut(s) 1438
PcsI WCGNNNNNNNCGW 1 cut(s) 513
PdiI GCCGGC 3 cut(s) 697, 763, 1087
PfeI GAWTC 4 cut(s) 29, 1010, 1118, 1306
PleI GAGTC 7 cut(s) 182, 433, 506, 657, 728, 1283, 1482
PluTI GGCGCC 1 cut(s) 1370
PpsI GAGTC 7 cut(s) 182, 433, 506, 657, 728, 1283, 1482
Psp6I CCWGG 3 cut(s) 416, 957, 1427
PspFI CCCAGC 1 cut(s) 1151
PspGI CCWGG 3 cut(s) 416, 957, 1427
PspN4I GGNNCC 7 cut(s) 586, 598, 604, 954, 1070, 1368, 1449
PspPI GGNCC 7 cut(s) 280, 584, 808, 984, 1047, 1083, 1088
PsuI RGATCY 2 cut(s) 211, 602
RigI GGCCGGCC 1 cut(s) 1089
RruI TCGCGA 1 cut(s) 102
RseI CAYNNNNRTG 3 cut(s) 171, 1315, 1409
SaqAI TTAA 3 cut(s) 84, 1389, 1554
Sau3AI GATC 5 cut(s) 149, 211, 602, 837, 1260
Sau96I GGNCC 7 cut(s) 280, 584, 808, 984, 1047, 1083, 1088
SchI GAGTC 7 cut(s) 182, 434, 506, 657, 728, 1283, 1483
ScrFI CCNGG 4 cut(s) 418, 959, 1091, 1429
SduI GDGCHC 2 cut(s) 780, 957
SfaNI GCATC 5 cut(s) 459, 723, 1026, 1442, 1507
SfoI GGCGCC 1 cut(s) 1368
SfuI TTCGAA 2 cut(s) 27, 1547
SinI GGWCC 2 cut(s) 280, 1047
SmiMI CAYNNNNRTG 3 cut(s) 171, 1315, 1409
SpeI ACTAGT 1 cut(s) 40
Sse9I AATT 7 cut(s) 86, 269, 907, 1112, 1245, 1375, 1537
SspDI GGCGCC 1 cut(s) 1366
SspI AATATT 1 cut(s) 1347
SspMI CTAG 2 cut(s) 41, 1073
StyD4I CCNGG 4 cut(s) 416, 957, 1089, 1427
StyI CCWWGG 3 cut(s) 276, 804, 1512
TaaI ACNGT 1 cut(s) 1136
TaiI ACGT 1 cut(s) 873
TaqI TCGA 6 cut(s) 27, 474, 549, 836, 877, 1547
TasI AATT 7 cut(s) 86, 269, 907, 1112, 1245, 1375, 1537
TauI GCSGC 6 cut(s) 563, 797, 946, 949, 1111, 1453
TfiI GAWTC 4 cut(s) 29, 1010, 1118, 1306
Tru1I TTAA 3 cut(s) 84, 1389, 1554
Tru9I TTAA 3 cut(s) 84, 1389, 1554
TscAI CASTG 3 cut(s) 1141, 1273, 1527
TseI GCWGC 5 cut(s) 1330, 1339, 1397, 1508, 1532
TspDTI ATGAA 1 cut(s) 1530
TspGWI ACGGA 1 cut(s) 916
TspRI CASTG 3 cut(s) 1141, 1273, 1527
VpaK11BI GGWCC 2 cut(s) 280, 1047
XapI RAATTY 3 cut(s) 86, 269, 1375
XcmI CCANNNNNNNNNTGG 3 cut(s) 274, 414, 1519
XspI CTAG 2 cut(s) 41, 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.