Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010422

Physical Location & Seq

Genomic Coordinates Forward (+)

25617684 .. 25621992

Gene Structure 4309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48683

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGAACAAGTCTCTAACTACAACACAAGATCCAGGCAGTCATTACAATCGCAGTGATCAACTTCAAGACCAAAGCATTGTGATTCCCGCCAAACTCATCAATCTCGCTAATAGCTTCGAAAAGAAAGAACACTCCTGGTTCATCACTTCTCATGTCCCAACGGACCTTACAATTCGAGTTCAAGAAATCACCTTCAATGTTCACAAGTATCCTGTGGTAGCAAAATGTGGCTACATAGGTCAATTGGAATTTCAGCCTTCGATCTCAAATTTTGGCAATGACTTGAAGCTTGAAAACTTCCCAGGTGGACCAGAAACCTTTGAAATGATTCTAAAATTCTGTTATGGTCTCCCACTGGATTTAAACCCTAACAATATAGCTCCACTAAGATGCGGATCAGAATTTCTAGAAATGACTGAAGAACTTCAAGCTGGAAATCTGATTTCCAAGACTGAATCTTTTCTGACATTGGTAGTCCTTTCTTCTTGGAAAGATACCATCACTGTACTTAAGTCCTGTGAAACTCTATCTCCATGGGCTGAGAATCTTCAAATTGTCAGAAGATGCTGCGACTCAATTGCATGGAAGGCTACTAGAGAAAACACCAGTGGGGATGCCGACGGTCAAGAACAATGGTGGTTTCATGAAGTGGCCACCTTTCGAATAGATCATTTCATGAGGGTCATATCGACAATAAAAGCAAAGAATACAAGGCCAGAGTTTATAGGTAAATGTATCATGCACTATGCAGAAAGATGGTTGCCAGGCATGGATGTGGAGTTTGAAGGACTAAGAGGATATGGAATTGCAAGAAATGACCTGCAGTTCAGTATCCTGAGTAACAGGAAAGAGGAAGGCGATTATGGACACAGCCAAGAGCAAAAAGCAATTATTGAAAGCCTCCTAAGCGTGCTTCCTCCCCAAAATGAAGCTGTTCCATGTAAATTCTTATTGCAGATGTTAAAGATGGCAATGATGTACTCGGCATCGCCAGCTTTGATTTCAGAGCTTGAAAAGAGAGTAGGGATGATGTTAGAAGATGCCACAGTCAATGATTTGCTGATTCCAAGTTATAATATTGCAGACCAAGGGAAACTGGTGAAATCTCCAGAAGAACGCACGATGCACGACATTGATGTTGTTCAAAGGATTGTGGAATATTTCTTGATGCATGAGCATCAACAGCAAGAGAAGACTGGTAAAACCAATATCAGTAAGCTCTTGGACAGCTACCTGGCTGAGATTGCAGGAGACCCAAATCTCTCGATAACCAAGTTTCAAGTATTGGCTGAATTGCTGCCTGAAAATGCTCGAGCATGTGATGATGGTCTTTATAGGGCTATTGACACCTATCTGAAGACTCATCCTACACTTCCCGAGCATGATCGAAGAAGGCTATGCAGGATAATGAACTGTGAGAAACTATCACTTGATGCATGCATGCATGCTGCACAAAATGATCGACTGCCTATGAAAACCATTGTCCAGGTTCTGTTCTCAGAGCAAGTAAAGATGAGGACAGCAATGCAAGAGAAGGAATCAGCACCAACTGGCAATAACTCTGAACAGGAAGGAAACCGCTCATCAACAGCTGCAGAAATTAAGAATCTTAAAGCGGAACTTGAGAATGCGAAGATAAGGATGGCAGAGCTGCAAAGAGACTACTCAGAGCTGCAACAGGAGTATGAAAAGATGAACAACAAGCAAAAGATTGTGTCAAGTTGGAGTTCAGGATGGAGAAAAATCAAGAAATCTTTCCATACAAAATCTGAAGCCAACGATACTGGAGAAGAAAAACAAAGACCCAACTCAATTGGGGGAAGAATCAGCTCCAGACGAAGGTCATCCATGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009965 GO:0010016 GO:0010051 GO:0010087 GO:0010154 GO:0010305 GO:0010588 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0061458 GO:0080022 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

618

Amino Acids

70.49

Weight (kDa)

6.08

Isoelectric Point (pI)

56.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	211 - 480	2.2e-91	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10250 AT5G10250
malus_domestica	MD01G1030300.v1.1 MD15G1323900.v1.1
prunus_persica	Prupe.6G187200_v2.0.a1
pyrus_communis	pycom01g05810 pycom15g28570 pycom15g28590
rosa_chinensis	RchiOBHm_Chr2g0113481
rosa_laevigata	RLG00000018068
rosa_multiflora	Rmu_sc0000929.1_g000050 Rmu_sc0007415.1_g000020
rosa_roxburghii	Rroxscaffold_2G00129210
rosa_rugosa	Rorug02G0187800 Rorug02G0187800
rosa_samantha	Rh2AG242300 Rh2BG256300 Rh2CG246500 Rh2DG250300
rosa_wichuraiana	Rw0G018880 Rw2G018940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1074
Acc36I	ACCTGC	1 cut(s)	828
AccBSI	CCGCTC	1 cut(s)	1581
AciI	CCGC	4 cut(s)	87, 393, 1579, 1616
AclWI	GGATC	2 cut(s)	23, 403
AcoI	YGGCCR	1 cut(s)	651
AcsI	RAATTY	5 cut(s)	248, 268, 335, 401, 944
AcuI	CTGAAG	3 cut(s)	438, 1376, 1791
AfaI	GTAC	2 cut(s)	507, 980
AfiI	CCNNNNNNNGG	1 cut(s)	1839
AflII	CTTAAG	1 cut(s)	509
AjnI	CCWGG	6 cut(s)	31, 134, 301, 763, 1233, 1485
Alw26I	GTCTC	4 cut(s)	15, 353, 1245, 1653
AlwI	GGATC	2 cut(s)	23, 403
AlwNI	CAGNNNCTG	1 cut(s)	1492
Ama87I	CYCGRG	2 cut(s)	1311, 1376
AoxI	GGCC	2 cut(s)	651, 713
ApeKI	GCWGC	6 cut(s)	567, 1297, 1448, 1592, 1651, 1672
ApoI	RAATTY	5 cut(s)	248, 268, 335, 401, 944
Asp700I	GAANNNNTTC	5 cut(s)	327, 423, 459, 933, 1754
AspS9I	GGNCC	2 cut(s)	163, 308
AsuHPI	GGTGA	2 cut(s)	181, 1111
AsuII	TTCGAA	2 cut(s)	117, 661
AvaI	CYCGRG	2 cut(s)	1311, 1376
AvaII	GGWCC	2 cut(s)	163, 308
BalI	TGGCCA	1 cut(s)	653
BbsI	GAAGAC	2 cut(s)	1199, 1364
BbvI	GCAGC	6 cut(s)	554, 1284, 1435, 1579, 1638, 1659
BccI	CCATC	6 cut(s)	506, 750, 961, 1319, 1636, 1728
BcgI	CGANNNNNNTGC	2 cut(s)	560, 594
BciT130I	CCWGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
BciVI	GTATCC	2 cut(s)	219, 842
BclI	TGATCA	1 cut(s)	55
BcoDI	GTCTC	4 cut(s)	15, 353, 1245, 1653
BfaI	CTAG	2 cut(s)	407, 594
BfmI	CTRYAG	2 cut(s)	821, 1593
BfrI	CTTAAG	1 cut(s)	509
BfuAI	ACCTGC	1 cut(s)	828
BfuI	GTATCC	2 cut(s)	219, 842
BisI	GCNGC	6 cut(s)	568, 1298, 1449, 1593, 1652, 1673
BlsI	GCNGC	6 cut(s)	569, 1299, 1450, 1594, 1653, 1674
Bme1390I	CCNGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
Bme18I	GGWCC	2 cut(s)	163, 308
BmeT110I	CYCGRG	2 cut(s)	1311, 1376
BmgT120I	GGNCC	2 cut(s)	163, 308
BmrFI	CCNGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
BmsI	GCATC	9 cut(s)	380, 554, 604, 995, 1030, 1113, 1158, 1186, 1423
BoxI	GACNNNNGTC	1 cut(s)	1840
BpiI	GAAGAC	2 cut(s)	1199, 1364
BpmI	CTGGAG	3 cut(s)	1092, 1806, 1816
Bpu10I	CCTNAGC	1 cut(s)	905
Bpu14I	TTCGAA	2 cut(s)	117, 661
BpuEI	CTTGAG	1 cut(s)	1643
BsaBI	GATNNNNATC	1 cut(s)	394
BsaI	GGTCTC	2 cut(s)	353, 1245
BsaJI	CCNNGG	3 cut(s)	301, 533, 1087
BsaXI	ACNNNNNCTCC	2 cut(s)	514, 544
Bsc4I	CCNNNNNNNGG	1 cut(s)	1839
Bse1I	ACTGG	6 cut(s)	360, 606, 1101, 1201, 1555, 1789
Bse3DI	GCAATG	3 cut(s)	283, 978, 1530
Bse8I	GATNNNNATC	1 cut(s)	394
BseBI	CCWGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
BseDI	CCNNGG	3 cut(s)	301, 533, 1087
BseGI	GGATG	7 cut(s)	619, 778, 1032, 1363, 1647, 1739, 1844
BseJI	GATNNNNATC	1 cut(s)	394
BseLI	CCNNNNNNNGG	1 cut(s)	1839
BseMI	GCAATG	3 cut(s)	283, 978, 1530
BseMII	CTCAG	5 cut(s)	531, 827, 1230, 1512, 1680
BseNI	ACTGG	6 cut(s)	360, 606, 1101, 1201, 1555, 1789
BseXI	GCAGC	6 cut(s)	554, 1284, 1435, 1579, 1638, 1659
BsgI	GTGCAG	1 cut(s)	1434
BshFI	GGCC	2 cut(s)	653, 715
BsiHKCI	CYCGRG	2 cut(s)	1311, 1376
BslFI	GGGAC	1 cut(s)	140
BslI	CCNNNNNNNGG	1 cut(s)	1839
BsmAI	GTCTC	4 cut(s)	15, 353, 1245, 1653
BsmFI	GGGAC	1 cut(s)	140
BsmI	GAATGC	1 cut(s)	1633
BsnI	GGCC	2 cut(s)	653, 715
Bso31I	GGTCTC	2 cut(s)	353, 1245
BsoBI	CYCGRG	2 cut(s)	1311, 1376
Bsp119I	TTCGAA	2 cut(s)	117, 661
Bsp143I	GATC	7 cut(s)	28, 55, 261, 395, 667, 1384, 1459
Bsp19I	CCATGG	1 cut(s)	533
BspACI	CCGC	4 cut(s)	87, 393, 1579, 1616
BspANI	GGCC	2 cut(s)	653, 715
BspCNI	CTCAG	5 cut(s)	532, 828, 1231, 1511, 1679
BspHI	TCATGA	2 cut(s)	643, 675
BspMAI	CTGCAG	2 cut(s)	825, 1597
BspMI	ACCTGC	1 cut(s)	828
BspPI	GGATC	2 cut(s)	23, 403
BspT104I	TTCGAA	2 cut(s)	117, 661
BspTI	CTTAAG	1 cut(s)	509
BspTNI	GGTCTC	2 cut(s)	353, 1245
BsrBI	CCGCTC	1 cut(s)	1581
BsrDI	GCAATG	3 cut(s)	283, 978, 1530
BsrI	ACTGG	6 cut(s)	360, 606, 1101, 1201, 1555, 1789
BssECI	CCNNGG	3 cut(s)	301, 533, 1087
BssMI	GATC	7 cut(s)	28, 55, 261, 395, 667, 1384, 1459
BssT1I	CCWWGG	2 cut(s)	533, 1087
Bst2UI	CCWGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
Bst4CI	ACNGT	4 cut(s)	505, 623, 1048, 1415
BstAFI	CTTAAG	1 cut(s)	509
BstBI	TTCGAA	2 cut(s)	117, 661
BstC8I	GCNNGC	5 cut(s)	911, 993, 1438, 1442, 1446
BstDEI	CTNAG	8 cut(s)	386, 540, 791, 836, 905, 1239, 1498, 1666
BstDSI	CCRYGG	1 cut(s)	533
BstF5I	GGATG	7 cut(s)	619, 778, 1032, 1363, 1647, 1739, 1844
BstKTI	GATC	7 cut(s)	31, 58, 264, 398, 670, 1387, 1462
BstMAI	GTCTC	4 cut(s)	15, 353, 1245, 1653
BstMBI	GATC	7 cut(s)	28, 55, 261, 395, 667, 1384, 1459
BstMWI	GCNNNNNNNGC	5 cut(s)	587, 906, 992, 1183, 1244
BstNI	CCWGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
BstNSI	RCATGY	4 cut(s)	1320, 1440, 1444, 1448
BstPAI	GACNNNNGTC	1 cut(s)	1840
BstSCI	CCNGG	6 cut(s)	31, 134, 301, 763, 1233, 1485
BstSFI	CTRYAG	2 cut(s)	821, 1593
BstV1I	GCAGC	6 cut(s)	554, 1284, 1435, 1579, 1638, 1659
BstV2I	GAAGAC	2 cut(s)	1199, 1364
BstX2I	RGATCY	1 cut(s)	28
BstYI	RGATCY	1 cut(s)	28
BsuI	GTATCC	2 cut(s)	219, 842
BsuRI	GGCC	2 cut(s)	653, 715
BtgI	CCRYGG	1 cut(s)	533
BtgZI	GCGATG	1 cut(s)	972
BtsCI	GGATG	7 cut(s)	619, 778, 1032, 1363, 1647, 1739, 1844
BtsI	GCAGTG	1 cut(s)	58
BtsIMutI	CAGTG	4 cut(s)	58, 353, 501, 613
BveI	ACCTGC	1 cut(s)	828
Cac8I	GCNNGC	5 cut(s)	911, 993, 1438, 1442, 1446
CaiI	CAGNNNCTG	1 cut(s)	1492
CciI	TCATGA	2 cut(s)	643, 675
Cfr13I	GGNCC	2 cut(s)	163, 308
Csp6I	GTAC	2 cut(s)	506, 979
CviQI	GTAC	2 cut(s)	506, 979
DdeI	CTNAG	8 cut(s)	386, 540, 791, 836, 905, 1239, 1498, 1666
DpnI	GATC	7 cut(s)	30, 57, 263, 397, 669, 1386, 1461
DpnII	GATC	7 cut(s)	28, 55, 261, 395, 667, 1384, 1459
DraI	TTTAAA	1 cut(s)	363
EaeI	YGGCCR	1 cut(s)	651
Eco130I	CCWWGG	2 cut(s)	533, 1087
Eco31I	GGTCTC	2 cut(s)	353, 1245
Eco47I	GGWCC	2 cut(s)	163, 308
Eco57I	CTGAAG	3 cut(s)	438, 1376, 1791
Eco88I	CYCGRG	2 cut(s)	1311, 1376
EcoRII	CCWGG	6 cut(s)	31, 134, 301, 763, 1233, 1485
EcoT14I	CCWWGG	2 cut(s)	533, 1087
EcoT22I	ATGCAT	4 cut(s)	1173, 1438, 1442, 1446
ErhI	CCWWGG	2 cut(s)	533, 1087
FalI	AAGNNNNNCTT	2 cut(s)	1605, 1637
FaqI	GGGAC	1 cut(s)	140
FauI	CCCGC	1 cut(s)	94
FbaI	TGATCA	1 cut(s)	55
Fnu4HI	GCNGC	6 cut(s)	568, 1298, 1449, 1593, 1652, 1673
FokI	GGATG	7 cut(s)	626, 785, 1039, 1350, 1654, 1746, 1831
Fsp4HI	GCNGC	6 cut(s)	568, 1298, 1449, 1593, 1652, 1673
FspBI	CTAG	2 cut(s)	407, 594
GluI	GCNGC	6 cut(s)	568, 1298, 1449, 1593, 1652, 1673
GsuI	CTGGAG	3 cut(s)	1092, 1806, 1816
HaeIII	GGCC	2 cut(s)	653, 715
HindIII	AAGCTT	1 cut(s)	287
HphI	GGTGA	2 cut(s)	181, 1111
Hpy166II	GTNNAC	2 cut(s)	202, 308
Hpy8I	GTNNAC	2 cut(s)	202, 308
Hpy99I	CGWCG	1 cut(s)	623
HpyAV	CCTTC	9 cut(s)	202, 267, 580, 779, 848, 1386, 1528, 1565, 1833
HpyCH4III	ACNGT	4 cut(s)	505, 623, 1048, 1415
HpyF10VI	GCNNNNNNNGC	5 cut(s)	587, 906, 992, 1183, 1244
HpyF3I	CTNAG	8 cut(s)	386, 540, 791, 836, 905, 1239, 1498, 1666
Ksp22I	TGATCA	1 cut(s)	55
Kzo9I	GATC	7 cut(s)	28, 55, 261, 395, 667, 1384, 1459
LmnI	GCTCC	2 cut(s)	385, 1835
Lsp1109I	GCAGC	6 cut(s)	554, 1284, 1435, 1579, 1638, 1659
LweI	GCATC	9 cut(s)	380, 554, 604, 995, 1030, 1113, 1158, 1186, 1423
MaeI	CTAG	2 cut(s)	407, 594
MaeIII	GTNAC	1 cut(s)	839
MalI	GATC	7 cut(s)	30, 57, 263, 397, 669, 1386, 1461
MbiI	CCGCTC	1 cut(s)	1581
MboI	GATC	7 cut(s)	28, 55, 261, 395, 667, 1384, 1459
MfeI	CAATTG	3 cut(s)	242, 576, 1812
MflI	RGATCY	1 cut(s)	28
MlsI	TGGCCA	1 cut(s)	653
MluNI	TGGCCA	1 cut(s)	653
MlyI	GAGTC	2 cut(s)	566, 1354
MmeI	TCCRAC	1 cut(s)	1703
MnlI	CCTC	6 cut(s)	672, 788, 844, 911, 927, 1509
Mox20I	TGGCCA	1 cut(s)	653
Mph1103I	ATGCAT	4 cut(s)	1173, 1438, 1442, 1446
MroXI	GAANNNNTTC	5 cut(s)	327, 423, 459, 933, 1754
MscI	TGGCCA	1 cut(s)	653
MseI	TTAA	5 cut(s)	362, 510, 962, 1602, 1611
MslI	CAYNNNNRTG	2 cut(s)	388, 773
Msp20I	TGGCCA	1 cut(s)	653
MspA1I	CMGCKG	1 cut(s)	1592
MspCI	CTTAAG	1 cut(s)	509
MspR9I	CCNGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
MunI	CAATTG	3 cut(s)	242, 576, 1812
Mva1269I	GAATGC	1 cut(s)	1633
MvaI	CCWGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
MwoI	GCNNNNNNNGC	5 cut(s)	587, 906, 992, 1183, 1244
NcoI	CCATGG	1 cut(s)	533
NdeII	GATC	7 cut(s)	28, 55, 261, 395, 667, 1384, 1459
NmeAIII	GCCGAG	1 cut(s)	962
NsiI	ATGCAT	4 cut(s)	1173, 1438, 1442, 1446
NspI	RCATGY	4 cut(s)	1320, 1440, 1444, 1448
NspV	TTCGAA	2 cut(s)	117, 661
PaeI	GCATGC	3 cut(s)	1440, 1444, 1448
PaeR7I	CTCGAG	1 cut(s)	1311
PagI	TCATGA	2 cut(s)	643, 675
PctI	GAATGC	1 cut(s)	1633
PdmI	GAANNNNTTC	5 cut(s)	327, 423, 459, 933, 1754
PfeI	GAWTC	8 cut(s)	82, 328, 455, 544, 1063, 1538, 1606, 1824
PkrI	GCNGC	6 cut(s)	569, 1299, 1450, 1594, 1653, 1674
PleI	GAGTC	2 cut(s)	566, 1354
PpsI	GAGTC	2 cut(s)	566, 1354
PshAI	GACNNNNGTC	1 cut(s)	1840
PsiI	TTATAA	1 cut(s)	1074
Psp6I	CCWGG	6 cut(s)	31, 134, 301, 763, 1233, 1485
PspGI	CCWGG	6 cut(s)	31, 134, 301, 763, 1233, 1485
PspPI	GGNCC	2 cut(s)	163, 308
PspXI	VCTCGAGB	1 cut(s)	1311
PstI	CTGCAG	2 cut(s)	825, 1597
PstNI	CAGNNNCTG	1 cut(s)	1492
PsuI	RGATCY	1 cut(s)	28
PvuII	CAGCTG	1 cut(s)	1592
RsaI	GTAC	2 cut(s)	507, 980
RsaNI	GTAC	2 cut(s)	506, 979
RseI	CAYNNNNRTG	2 cut(s)	388, 773
SaqAI	TTAA	5 cut(s)	362, 510, 962, 1602, 1611
SatI	GCNGC	6 cut(s)	568, 1298, 1449, 1593, 1652, 1673
Sau3AI	GATC	7 cut(s)	28, 55, 261, 395, 667, 1384, 1459
Sau96I	GGNCC	2 cut(s)	163, 308
SchI	GAGTC	2 cut(s)	566, 1354
ScrFI	CCNGG	6 cut(s)	33, 136, 303, 765, 1235, 1487
SfaNI	GCATC	9 cut(s)	380, 554, 604, 995, 1030, 1113, 1158, 1186, 1423
SfcI	CTRYAG	2 cut(s)	821, 1593
Sfr274I	CTCGAG	1 cut(s)	1311
SfuI	TTCGAA	2 cut(s)	117, 661
SinI	GGWCC	2 cut(s)	163, 308
SlaI	CTCGAG	1 cut(s)	1311
SmiMI	CAYNNNNRTG	2 cut(s)	388, 773
SmlI	CTYRAG	3 cut(s)	509, 1311, 1622
SmoI	CTYRAG	3 cut(s)	509, 1311, 1622
SphI	GCATGC	3 cut(s)	1440, 1444, 1448
SsiI	CCGC	4 cut(s)	87, 393, 1579, 1616
SspI	AATATT	2 cut(s)	1078, 1160
SspMI	CTAG	2 cut(s)	407, 594
StyD4I	CCNGG	6 cut(s)	31, 134, 301, 763, 1233, 1485
StyI	CCWWGG	2 cut(s)	533, 1087
TaaI	ACNGT	4 cut(s)	505, 623, 1048, 1415
TaqI	TCGA	9 cut(s)	117, 175, 260, 661, 689, 1265, 1312, 1387, 1462
TatI	WGTACW	2 cut(s)	505, 978
TfiI	GAWTC	8 cut(s)	82, 328, 455, 544, 1063, 1538, 1606, 1824
Tru1I	TTAA	5 cut(s)	362, 510, 962, 1602, 1611
Tru9I	TTAA	5 cut(s)	362, 510, 962, 1602, 1611
TscAI	CASTG	4 cut(s)	58, 360, 508, 613
TseI	GCWGC	6 cut(s)	567, 1297, 1448, 1592, 1651, 1672
TspGWI	ACGGA	1 cut(s)	176
TspRI	CASTG	4 cut(s)	58, 360, 508, 613
Vha464I	CTTAAG	1 cut(s)	509
VpaK11BI	GGWCC	2 cut(s)	163, 308
XapI	RAATTY	5 cut(s)	248, 268, 335, 401, 944
XbaI	TCTAGA	1 cut(s)	406
XceI	RCATGY	4 cut(s)	1320, 1440, 1444, 1448
XhoI	CTCGAG	1 cut(s)	1311
XmnI	GAANNNNTTC	5 cut(s)	327, 423, 459, 933, 1754
XspI	CTAG	2 cut(s)	407, 594
Zsp2I	ATGCAT	4 cut(s)	1173, 1438, 1442, 1446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.