Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0010422

Physical Location & Seq

Genomic Coordinates Reverse (-)

65035204 .. 65039193

Gene Structure 3990 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00129210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1860 bp

ATGAAGAAGTCTCTAACTACAACACAAAATCCAGGCAGTCATTACAATCGCAGTGATCAACTTCAAGACCAAAGCATTGTGATTCCTGCCGCCAAACTCATCAATCTAGCTGATAGCTTCGAAAAGAAAGAACACTCCTGGTTCATCACTTCTCATGTCCCAACGGACCTTACAATTCGAGTTCAAGAAATCACCTTCAATGTTCACAAGTATCCTGTGGTAGCAAAATGTGGCTACATAGGTCAATTGGAATTTCAGCCTTCGATCTCAAATTTTGGCAATGACTTGAAGCTTGAAAACTTCCCAGGTGGACCAGAAACCTTTGAAATGATTCTAAAATTCTGTTATGGTCTCCCACTGGATTTAAACCCTAACAATATAGCTCCACTAAGATGCGGATCAGAATTTCTAGAAATGACTGAAGAACTTCAAGCTGGAAATCTGATTTCCAAGACTGAATCTTTTCTGACATTGGTAGTCCTTTCTTCTTGGAAAGATACCATCACTGTGCTTAAGTCCTGTGAAACTCTATCTCCATGGGCTGAGAATCTTCAAATTGTCAGAAGATGCTGCGACTCAATTGCATGGAAGGCTACTAGAGAAAACACCAGTGGGGATGCCGACGGTCAAGAACAATGGTGGTTTCGTGAAGTGGCCACCTTTCGAATAGATCATTTCATGAGGGTCATATCGACAATAAAAGCAAAGAATACAAGGCCAGAGTTTATAGGTAAATGTATCATGCACTATGCAGAAAGATGGTTGCCAGGCATGGATGTGGAGTTTGAAGGACTAAGAGGATATGGAATTGGAAGAAATGACCTGCAGTTCAGTATCCTGAGTAACAGGAAAGAGGAAGGCGATTATGGACACAGCCAGGAGCAAAAAGCAATTATTGAAAGCCTCCTAAGCGTACTTCCTCCCCAAAATGAAGCTGTTCCATGTAAATTCTTATTGCAGATGTTAAAGATGGCAATGATGTACTCGGCATCACCAGCTTTGATTTCAGAGCTTGAAAAGAGAGTAGGGATGATGTTAGAAGATGCTACAGTCAATGATTTGCTGATTCCAAGTTATAATATTGCAGACCAAGGGAAACTGGTGAAGTCTCCAGAAGAACGCACGATGCATGACATTGATGTTGTTCAAAGGATTGTGGAATATTTCTTGATGCATGAGCATCAACAGCAAGAGAAGACTGGTAAAACCAATATCAGTAAGCTCTTGGACAGCTACCTGGCTGAGATTGCAGGAGACCCAAATCTCTCGATAACCAAGTTTCAAGTATTGGCTGAATTGCTGCCTGAAAATGCTCGAGCATGTGATGATGGTCTTTATAGGGCTATTGACACCTATCTGAAGACTCATCCTTCACTTCCCGAGCATGATCGAAGAAGGCTATGCAGGATAATGAACTGTGAGAAACTATCACTTGATGCATGCATGCATGCTGCACAAAATGATCGACTGCCTATGAAAACCATTGTCCAGGTTCTGTTCTCAGAGCAAGTAAAGATGAGGACAGCAATGCAAGAGAAGGAATCAGCACCAACTGGCAATAACTCTGAACAGGAAGGAAACCGCTCATCAACAGATGCAGAAATTAAGAATCTTAAAGCGGAACTTGAGAATGCGAAGATAAGGATGGCAGAGCTGCAAAGAGACTACTCAGAGCTGCAACAGGAGTATGAAAAGATGAACAACAAGCAAAAGATTGTGTCAAGTTGGAGTTCAGGATGGAGAAAAATCAAGAAATCTTTCCATACAAAATCTGAAGCCAACGATACTGGAGAAGAAAAACAAAGACCCAACTCAATTGGGGGAAGAATCAGCTCCAGACGAAGGTCATCCATGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009965 GO:0010016 GO:0010051 GO:0010087 GO:0010154 GO:0010305 GO:0010588 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0061458 GO:0080022 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

619

Amino Acids

70.61

Weight (kDa)

6.13

Isoelectric Point (pI)

55.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	212 - 481	2.4e-91	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10250 AT5G10250
malus_domestica	MD01G1030300.v1.1 MD15G1323900.v1.1
prunus_persica	Prupe.6G187200_v2.0.a1
pyrus_communis	pycom01g05810 pycom15g28570 pycom15g28590
rosa_chinensis	RchiOBHm_Chr2g0113481
rosa_laevigata	RLG00000018068
rosa_multiflora	Rmu_sc0000929.1_g000050 Rmu_sc0007415.1_g000020
rosa_roxburghii	Rroxscaffold_2G00129210
rosa_rugosa	Rorug02G0187800 Rorug02G0187800
rosa_samantha	Rh2AG242300 Rh2BG256300 Rh2CG246500 Rh2DG250300
rosa_wichuraiana	Rw0G018880 Rw2G018940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1077
Acc36I	ACCTGC	1 cut(s)	831
AccBSI	CCGCTC	1 cut(s)	1584
AciI	CCGC	4 cut(s)	90, 396, 1582, 1619
AclWI	GGATC	1 cut(s)	406
AcoI	YGGCCR	1 cut(s)	654
AcsI	RAATTY	5 cut(s)	251, 271, 338, 404, 947
AcuI	CTGAAG	3 cut(s)	441, 1379, 1794
AfaI	GTAC	2 cut(s)	915, 983
AfiI	CCNNNNNNNGG	1 cut(s)	1842
AflII	CTTAAG	1 cut(s)	512
AjnI	CCWGG	7 cut(s)	31, 137, 304, 766, 876, 1236, 1488
Alw26I	GTCTC	5 cut(s)	15, 356, 1113, 1248, 1656
AlwI	GGATC	1 cut(s)	406
AlwNI	CAGNNNCTG	1 cut(s)	1495
Ama87I	CYCGRG	2 cut(s)	1314, 1379
AoxI	GGCC	2 cut(s)	654, 716
ApeKI	GCWGC	5 cut(s)	570, 1300, 1451, 1654, 1675
ApoI	RAATTY	5 cut(s)	251, 271, 338, 404, 947
Asp700I	GAANNNNTTC	5 cut(s)	330, 426, 462, 936, 1757
AspS9I	GGNCC	2 cut(s)	166, 311
AsuHPI	GGTGA	3 cut(s)	184, 984, 1114
AsuII	TTCGAA	2 cut(s)	120, 664
AvaI	CYCGRG	2 cut(s)	1314, 1379
AvaII	GGWCC	2 cut(s)	166, 311
BalI	TGGCCA	1 cut(s)	656
BbsI	GAAGAC	2 cut(s)	1202, 1367
BbvI	GCAGC	5 cut(s)	557, 1287, 1438, 1641, 1662
BccI	CCATC	6 cut(s)	509, 753, 964, 1322, 1639, 1731
BcgI	CGANNNNNNTGC	2 cut(s)	563, 597
BciT130I	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
BciVI	GTATCC	2 cut(s)	222, 845
BclI	TGATCA	1 cut(s)	55
BcoDI	GTCTC	5 cut(s)	15, 356, 1113, 1248, 1656
BfaI	CTAG	3 cut(s)	107, 410, 597
BfmI	CTRYAG	2 cut(s)	824, 1047
BfrI	CTTAAG	1 cut(s)	512
BfuAI	ACCTGC	1 cut(s)	831
BfuI	GTATCC	2 cut(s)	222, 845
BisI	GCNGC	6 cut(s)	90, 571, 1301, 1452, 1655, 1676
BlsI	GCNGC	6 cut(s)	91, 572, 1302, 1453, 1656, 1677
Bme1390I	CCNGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
Bme18I	GGWCC	2 cut(s)	166, 311
BmeT110I	CYCGRG	2 cut(s)	1314, 1379
BmgT120I	GGNCC	2 cut(s)	166, 311
BmrFI	CCNGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
BoxI	GACNNNNGTC	1 cut(s)	1843
BpiI	GAAGAC	2 cut(s)	1202, 1367
BpmI	CTGGAG	3 cut(s)	1095, 1809, 1819
Bpu10I	CCTNAGC	1 cut(s)	908
Bpu14I	TTCGAA	2 cut(s)	120, 664
BpuEI	CTTGAG	1 cut(s)	1646
BsaBI	GATNNNNATC	1 cut(s)	397
BsaI	GGTCTC	2 cut(s)	356, 1248
BsaJI	CCNNGG	3 cut(s)	304, 536, 1090
BsaXI	ACNNNNNCTCC	2 cut(s)	517, 547
Bsc4I	CCNNNNNNNGG	1 cut(s)	1842
Bse1I	ACTGG	6 cut(s)	363, 609, 1104, 1204, 1558, 1792
Bse3DI	GCAATG	3 cut(s)	286, 981, 1533
Bse8I	GATNNNNATC	1 cut(s)	397
BseBI	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
BseDI	CCNNGG	3 cut(s)	304, 536, 1090
BseGI	GGATG	7 cut(s)	622, 781, 1035, 1366, 1650, 1742, 1847
BseJI	GATNNNNATC	1 cut(s)	397
BseLI	CCNNNNNNNGG	1 cut(s)	1842
BseMI	GCAATG	3 cut(s)	286, 981, 1533
BseMII	CTCAG	5 cut(s)	534, 830, 1233, 1515, 1683
BseNI	ACTGG	6 cut(s)	363, 609, 1104, 1204, 1558, 1792
BseXI	GCAGC	5 cut(s)	557, 1287, 1438, 1641, 1662
BsgI	GTGCAG	1 cut(s)	1437
BshFI	GGCC	2 cut(s)	656, 718
BsiHKCI	CYCGRG	2 cut(s)	1314, 1379
BslFI	GGGAC	1 cut(s)	143
BslI	CCNNNNNNNGG	1 cut(s)	1842
BsmAI	GTCTC	5 cut(s)	15, 356, 1113, 1248, 1656
BsmFI	GGGAC	1 cut(s)	143
BsmI	GAATGC	1 cut(s)	1636
BsnI	GGCC	2 cut(s)	656, 718
Bso31I	GGTCTC	2 cut(s)	356, 1248
BsoBI	CYCGRG	2 cut(s)	1314, 1379
Bsp119I	TTCGAA	2 cut(s)	120, 664
Bsp143I	GATC	6 cut(s)	55, 264, 398, 670, 1387, 1462
Bsp19I	CCATGG	1 cut(s)	536
BspACI	CCGC	4 cut(s)	90, 396, 1582, 1619
BspANI	GGCC	2 cut(s)	656, 718
BspCNI	CTCAG	5 cut(s)	535, 831, 1234, 1514, 1682
BspHI	TCATGA	1 cut(s)	678
BspMAI	CTGCAG	1 cut(s)	828
BspMI	ACCTGC	1 cut(s)	831
BspPI	GGATC	1 cut(s)	406
BspT104I	TTCGAA	2 cut(s)	120, 664
BspTI	CTTAAG	1 cut(s)	512
BspTNI	GGTCTC	2 cut(s)	356, 1248
BsrBI	CCGCTC	1 cut(s)	1584
BsrDI	GCAATG	3 cut(s)	286, 981, 1533
BsrI	ACTGG	6 cut(s)	363, 609, 1104, 1204, 1558, 1792
BssECI	CCNNGG	3 cut(s)	304, 536, 1090
BssMI	GATC	6 cut(s)	55, 264, 398, 670, 1387, 1462
BssT1I	CCWWGG	2 cut(s)	536, 1090
Bst2UI	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
Bst4CI	ACNGT	4 cut(s)	508, 626, 1051, 1418
BstAFI	CTTAAG	1 cut(s)	512
BstBI	TTCGAA	2 cut(s)	120, 664
BstC8I	GCNNGC	3 cut(s)	1441, 1445, 1449
BstDEI	CTNAG	8 cut(s)	389, 543, 794, 839, 908, 1242, 1501, 1669
BstDSI	CCRYGG	1 cut(s)	536
BstF5I	GGATG	7 cut(s)	622, 781, 1035, 1366, 1650, 1742, 1847
BstKTI	GATC	6 cut(s)	58, 267, 401, 673, 1390, 1465
BstMAI	GTCTC	5 cut(s)	15, 356, 1113, 1248, 1656
BstMBI	GATC	6 cut(s)	55, 264, 398, 670, 1387, 1462
BstMWI	GCNNNNNNNGC	5 cut(s)	590, 909, 995, 1186, 1247
BstNI	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
BstNSI	RCATGY	4 cut(s)	1323, 1443, 1447, 1451
BstPAI	GACNNNNGTC	1 cut(s)	1843
BstSCI	CCNGG	7 cut(s)	31, 137, 304, 766, 876, 1236, 1488
BstSFI	CTRYAG	2 cut(s)	824, 1047
BstV1I	GCAGC	5 cut(s)	557, 1287, 1438, 1641, 1662
BstV2I	GAAGAC	2 cut(s)	1202, 1367
BsuI	GTATCC	2 cut(s)	222, 845
BsuRI	GGCC	2 cut(s)	656, 718
BtgI	CCRYGG	1 cut(s)	536
BtsCI	GGATG	7 cut(s)	622, 781, 1035, 1366, 1650, 1742, 1847
BtsI	GCAGTG	1 cut(s)	58
BtsIMutI	CAGTG	4 cut(s)	58, 356, 504, 616
BveI	ACCTGC	1 cut(s)	831
Cac8I	GCNNGC	3 cut(s)	1441, 1445, 1449
CaiI	CAGNNNCTG	1 cut(s)	1495
CciI	TCATGA	1 cut(s)	678
Cfr13I	GGNCC	2 cut(s)	166, 311
Csp6I	GTAC	2 cut(s)	914, 982
CviQI	GTAC	2 cut(s)	914, 982
DdeI	CTNAG	8 cut(s)	389, 543, 794, 839, 908, 1242, 1501, 1669
DpnI	GATC	6 cut(s)	57, 266, 400, 672, 1389, 1464
DpnII	GATC	6 cut(s)	55, 264, 398, 670, 1387, 1462
DraI	TTTAAA	1 cut(s)	366
EaeI	YGGCCR	1 cut(s)	654
Eco130I	CCWWGG	2 cut(s)	536, 1090
Eco31I	GGTCTC	2 cut(s)	356, 1248
Eco47I	GGWCC	2 cut(s)	166, 311
Eco57I	CTGAAG	3 cut(s)	441, 1379, 1794
Eco88I	CYCGRG	2 cut(s)	1314, 1379
EcoRII	CCWGG	7 cut(s)	31, 137, 304, 766, 876, 1236, 1488
EcoT14I	CCWWGG	2 cut(s)	536, 1090
EcoT22I	ATGCAT	5 cut(s)	1131, 1176, 1441, 1445, 1449
ErhI	CCWWGG	2 cut(s)	536, 1090
FalI	AAGNNNNNCTT	2 cut(s)	1608, 1640
FaqI	GGGAC	1 cut(s)	143
FbaI	TGATCA	1 cut(s)	55
Fnu4HI	GCNGC	6 cut(s)	90, 571, 1301, 1452, 1655, 1676
FokI	GGATG	7 cut(s)	629, 788, 1042, 1353, 1657, 1749, 1834
Fsp4HI	GCNGC	6 cut(s)	90, 571, 1301, 1452, 1655, 1676
FspBI	CTAG	3 cut(s)	107, 410, 597
GluI	GCNGC	6 cut(s)	90, 571, 1301, 1452, 1655, 1676
GsuI	CTGGAG	3 cut(s)	1095, 1809, 1819
HaeIII	GGCC	2 cut(s)	656, 718
HindIII	AAGCTT	1 cut(s)	290
HphI	GGTGA	3 cut(s)	184, 984, 1114
Hpy166II	GTNNAC	2 cut(s)	205, 311
Hpy8I	GTNNAC	2 cut(s)	205, 311
Hpy99I	CGWCG	1 cut(s)	626
HpyCH4III	ACNGT	4 cut(s)	508, 626, 1051, 1418
HpyF10VI	GCNNNNNNNGC	5 cut(s)	590, 909, 995, 1186, 1247
HpyF3I	CTNAG	8 cut(s)	389, 543, 794, 839, 908, 1242, 1501, 1669
Ksp22I	TGATCA	1 cut(s)	55
Kzo9I	GATC	6 cut(s)	55, 264, 398, 670, 1387, 1462
LmnI	GCTCC	3 cut(s)	388, 880, 1838
Lsp1109I	GCAGC	5 cut(s)	557, 1287, 1438, 1641, 1662
MaeI	CTAG	3 cut(s)	107, 410, 597
MaeIII	GTNAC	1 cut(s)	842
MalI	GATC	6 cut(s)	57, 266, 400, 672, 1389, 1464
MbiI	CCGCTC	1 cut(s)	1584
MboI	GATC	6 cut(s)	55, 264, 398, 670, 1387, 1462
MfeI	CAATTG	3 cut(s)	245, 579, 1815
MlsI	TGGCCA	1 cut(s)	656
MluNI	TGGCCA	1 cut(s)	656
MlyI	GAGTC	2 cut(s)	569, 1357
MmeI	TCCRAC	1 cut(s)	1706
MnlI	CCTC	6 cut(s)	675, 791, 847, 914, 930, 1512
Mox20I	TGGCCA	1 cut(s)	656
Mph1103I	ATGCAT	5 cut(s)	1131, 1176, 1441, 1445, 1449
MroXI	GAANNNNTTC	5 cut(s)	330, 426, 462, 936, 1757
MscI	TGGCCA	1 cut(s)	656
MseI	TTAA	5 cut(s)	365, 513, 965, 1605, 1614
MslI	CAYNNNNRTG	3 cut(s)	391, 506, 776
Msp20I	TGGCCA	1 cut(s)	656
MspCI	CTTAAG	1 cut(s)	512
MspR9I	CCNGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
MunI	CAATTG	3 cut(s)	245, 579, 1815
Mva1269I	GAATGC	1 cut(s)	1636
MvaI	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
MwoI	GCNNNNNNNGC	5 cut(s)	590, 909, 995, 1186, 1247
NcoI	CCATGG	1 cut(s)	536
NdeII	GATC	6 cut(s)	55, 264, 398, 670, 1387, 1462
NmeAIII	GCCGAG	1 cut(s)	965
NsiI	ATGCAT	5 cut(s)	1131, 1176, 1441, 1445, 1449
NspI	RCATGY	4 cut(s)	1323, 1443, 1447, 1451
NspV	TTCGAA	2 cut(s)	120, 664
PaeI	GCATGC	3 cut(s)	1443, 1447, 1451
PaeR7I	CTCGAG	1 cut(s)	1314
PagI	TCATGA	1 cut(s)	678
PctI	GAATGC	1 cut(s)	1636
PdmI	GAANNNNTTC	5 cut(s)	330, 426, 462, 936, 1757
PfeI	GAWTC	8 cut(s)	82, 331, 458, 547, 1066, 1541, 1609, 1827
PkrI	GCNGC	6 cut(s)	91, 572, 1302, 1453, 1656, 1677
PleI	GAGTC	2 cut(s)	569, 1357
PpsI	GAGTC	2 cut(s)	569, 1357
PshAI	GACNNNNGTC	1 cut(s)	1843
PsiI	TTATAA	1 cut(s)	1077
Psp6I	CCWGG	7 cut(s)	31, 137, 304, 766, 876, 1236, 1488
PspGI	CCWGG	7 cut(s)	31, 137, 304, 766, 876, 1236, 1488
PspPI	GGNCC	2 cut(s)	166, 311
PspXI	VCTCGAGB	1 cut(s)	1314
PstI	CTGCAG	1 cut(s)	828
PstNI	CAGNNNCTG	1 cut(s)	1495
RsaI	GTAC	2 cut(s)	915, 983
RsaNI	GTAC	2 cut(s)	914, 982
RseI	CAYNNNNRTG	3 cut(s)	391, 506, 776
SaqAI	TTAA	5 cut(s)	365, 513, 965, 1605, 1614
SatI	GCNGC	6 cut(s)	90, 571, 1301, 1452, 1655, 1676
Sau3AI	GATC	6 cut(s)	55, 264, 398, 670, 1387, 1462
Sau96I	GGNCC	2 cut(s)	166, 311
SchI	GAGTC	2 cut(s)	569, 1357
ScrFI	CCNGG	7 cut(s)	33, 139, 306, 768, 878, 1238, 1490
SfcI	CTRYAG	2 cut(s)	824, 1047
Sfr274I	CTCGAG	1 cut(s)	1314
SfuI	TTCGAA	2 cut(s)	120, 664
SinI	GGWCC	2 cut(s)	166, 311
SlaI	CTCGAG	1 cut(s)	1314
SmiMI	CAYNNNNRTG	3 cut(s)	391, 506, 776
SmlI	CTYRAG	3 cut(s)	512, 1314, 1625
SmoI	CTYRAG	3 cut(s)	512, 1314, 1625
SphI	GCATGC	3 cut(s)	1443, 1447, 1451
SsiI	CCGC	4 cut(s)	90, 396, 1582, 1619
SspI	AATATT	2 cut(s)	1081, 1163
SspMI	CTAG	3 cut(s)	107, 410, 597
StyD4I	CCNGG	7 cut(s)	31, 137, 304, 766, 876, 1236, 1488
StyI	CCWWGG	2 cut(s)	536, 1090
TaaI	ACNGT	4 cut(s)	508, 626, 1051, 1418
TaqI	TCGA	9 cut(s)	120, 178, 263, 664, 692, 1268, 1315, 1390, 1465
TatI	WGTACW	1 cut(s)	981
TauI	GCSGC	1 cut(s)	92
TfiI	GAWTC	8 cut(s)	82, 331, 458, 547, 1066, 1541, 1609, 1827
Tru1I	TTAA	5 cut(s)	365, 513, 965, 1605, 1614
Tru9I	TTAA	5 cut(s)	365, 513, 965, 1605, 1614
TscAI	CASTG	4 cut(s)	58, 363, 511, 616
TseI	GCWGC	5 cut(s)	570, 1300, 1451, 1654, 1675
TspDTI	ATGAA	8 cut(s)	17, 133, 667, 945, 1427, 1490, 1704, 1712
TspGWI	ACGGA	1 cut(s)	179
TspRI	CASTG	4 cut(s)	58, 363, 511, 616
Vha464I	CTTAAG	1 cut(s)	512
VpaK11BI	GGWCC	2 cut(s)	166, 311
XapI	RAATTY	5 cut(s)	251, 271, 338, 404, 947
XbaI	TCTAGA	1 cut(s)	409
XceI	RCATGY	4 cut(s)	1323, 1443, 1447, 1451
XhoI	CTCGAG	1 cut(s)	1314
XmnI	GAANNNNTTC	5 cut(s)	330, 426, 462, 936, 1757
XspI	CTAG	3 cut(s)	107, 410, 597
Zsp2I	ATGCAT	5 cut(s)	1131, 1176, 1441, 1445, 1449

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.