Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00848

Orthogroup ID

OG0010422

Physical Location & Seq

Genomic Coordinates Forward (+)

27699 .. 31606

Gene Structure 3908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G018880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGAAGAAGTCTCTAACTACAACACAAAATCCAGGCAGTCATTACAATCGCAGTGATCAACTTCAAGACCAAAGCATTGTGATTCCCGCCGCCAAACTCATCAATCTAGCTGATGGCTTCGAAAAGAAAGAACACTCCTGGTTCATCACTTCTCATGTCCCAACGGACCTTACAATTCGAGTTCAAGAAATCACCTTCAATGTTCACAAGTATCCTGTGGTAGCAAAATGTGGCTACATAGGTCAATTGGAATTTCAGCCTTCGATCTCAAATTTTGGCAATGACTTGAAGCTTGAAAACTTCCCAGGTGGACCAGAAACCTTTGAAATGATTCTAAAATTCTGTTATGGTCTCCCACTGGATTTAAACCCTAACAATATAGCTCCACTAAGATGCGGATCAGAATTTTTAGAAATGACTGAAGAACTTCAAGCTGGAAATCTGATTTCCAAGACTGAATCTTTTCTGACATTGGTAGTCCTTTCTTCTTGGAAAGATACCATCACTGTACTTAAGTCCTGTGAAACTCTATCTCCATGGGCTGAGAATCTTCAAATTGTCAGAAGATGCTGCGACTCAATTGCATGGAAGGCTACTAGAGAAAACAAAAGTGGGGATGCCGACGGTCAAGAACAAGCTTGGTTTCGTGAAGTGGCCACCTTTCGAATAGATCATTTCATGAGGGTCATATCGACAATAAAAGCAAAGAATACAAGGCCAGAGTTTATAGGTAAATGTATCATGCACTATGCAGAAAGATGGTTGCCAGGCATGGATGTGGAGTTTGAAGGACTAAGAGGATATGGAATTGGAAGAAATGACCTGCAGTTCAGTATCCTGAGTAACAGGAAAGAGGATGGCGATTATGGACACAGCCAGGAGCAAAAAGCAATTATTGAAAGCCTCCTAAGCGTACTTCCTCCCCAAAATGAAGCTGTTCCATGTAAATTCTTATTGCAGATGTTAAAGATGGCAATGATCTTGAAAAGGAGTAGGGATGATGTTAGAGAAGATGCTACAGTCAATGATTTGCTGATTCCAAGTTATAATATTGCAGACCAAGGGAAACTGGTGAAGTCTCCAGAAGAACGCATGATGCACGACATTGATGTTGTTCAAAGGATTGTGGAATATTTCTTGATGCATGAGCATCAACAGCAAGAAAAGACTGGTAGAACCAATATCAGTAAGCTCTTGGACAGCTACCTGGCTGAGATTGCAGGAGACCCAAATCTCTCGATAACCAAGTTTCAAGTATTGGCTGAATTGCTGCCTGAAAATGCTCGAGCATGTGATGATGGTCTTTATAGGGCTATTGACACCTATCTGAAGACTCATCCTTCACTTCCCGAGCATGATCGAAGAAGGCTATGCAGGATAATGAACTGTGAGAAACTATCACTTGATGCATGCACGCATGCTGCACAAAATGATCGACTGCCTATGAAAACCATTGTCCAGGTTCTGTTCTCAGAGCAAGTAAAGATGAGGACAGCAATGCAAGAGAAGGAATCAGCACCAACTGGCAATAACTCTGAACAGGAAGGAAACCGCTCATCAACAGATGCAGAAATTAAGAATCTTAAAGCGGAACTTGAGAATGCGAAGATAAGGATGGCAGAGCTGCAAAGAGACTACTCAGAGCTGCAACAGGAGTATGAAAAGATGAACAACAAGCAAAAGATTAAATCTTTCCATACAAAATCTGAAGCCAACGATACTGGAGAAGAAAAACAAAGACCCAACTCAATTGGGGGCAGAATCAGCTCCAGACGAAGGTCATCCATGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009965 GO:0010016 GO:0010051 GO:0010087 GO:0010154 GO:0010305 GO:0010588 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0061458 GO:0080022 GO:0090698 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

597

Amino Acids

68.14

Weight (kDa)

6.13

Isoelectric Point (pI)

55.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	213 - 471	1.1e-76	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010422)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10250 AT5G10250
malus_domestica	MD01G1030300.v1.1 MD15G1323900.v1.1
prunus_persica	Prupe.6G187200_v2.0.a1
pyrus_communis	pycom01g05810 pycom15g28570 pycom15g28590
rosa_chinensis	RchiOBHm_Chr2g0113481
rosa_laevigata	RLG00000018068
rosa_multiflora	Rmu_sc0000929.1_g000050 Rmu_sc0007415.1_g000020
rosa_roxburghii	Rroxscaffold_2G00129210
rosa_rugosa	Rorug02G0187800 Rorug02G0187800
rosa_samantha	Rh2AG242300 Rh2BG256300 Rh2CG246500 Rh2DG250300
rosa_wichuraiana	Rw0G018880 Rw2G018940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1047
Acc36I	ACCTGC	1 cut(s)	831
AccBSI	CCGCTC	1 cut(s)	1554
AciI	CCGC	5 cut(s)	87, 90, 396, 1552, 1589
AclWI	GGATC	1 cut(s)	406
AcoI	YGGCCR	1 cut(s)	654
AcsI	RAATTY	5 cut(s)	251, 271, 338, 404, 947
AcuI	CTGAAG	3 cut(s)	441, 1349, 1728
AfaI	GTAC	2 cut(s)	510, 915
AfiI	CCNNNNNNNGG	1 cut(s)	1776
AflII	CTTAAG	1 cut(s)	512
AjnI	CCWGG	7 cut(s)	31, 137, 304, 766, 876, 1206, 1458
Alw26I	GTCTC	5 cut(s)	15, 356, 1083, 1218, 1626
AlwI	GGATC	1 cut(s)	406
AlwNI	CAGNNNCTG	1 cut(s)	1465
Ama87I	CYCGRG	2 cut(s)	1284, 1349
AoxI	GGCC	2 cut(s)	654, 716
ApeKI	GCWGC	5 cut(s)	570, 1270, 1421, 1624, 1645
ApoI	RAATTY	5 cut(s)	251, 271, 338, 404, 947
Asp700I	GAANNNNTTC	4 cut(s)	330, 426, 462, 936
AspS9I	GGNCC	2 cut(s)	166, 311
AsuHPI	GGTGA	2 cut(s)	184, 1084
AsuII	TTCGAA	2 cut(s)	120, 664
AvaI	CYCGRG	2 cut(s)	1284, 1349
AvaII	GGWCC	2 cut(s)	166, 311
BalI	TGGCCA	1 cut(s)	656
BbsI	GAAGAC	1 cut(s)	1337
BbvI	GCAGC	5 cut(s)	557, 1257, 1408, 1611, 1632
BccI	CCATC	7 cut(s)	107, 509, 753, 851, 964, 1292, 1609
BcgI	CGANNNNNNTGC	2 cut(s)	563, 597
BciT130I	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
BciVI	GTATCC	2 cut(s)	222, 845
BclI	TGATCA	1 cut(s)	55
BcoDI	GTCTC	5 cut(s)	15, 356, 1083, 1218, 1626
BfaI	CTAG	2 cut(s)	107, 597
BfmI	CTRYAG	2 cut(s)	824, 1017
BfrI	CTTAAG	1 cut(s)	512
BfuAI	ACCTGC	1 cut(s)	831
BfuI	GTATCC	2 cut(s)	222, 845
BisI	GCNGC	6 cut(s)	90, 571, 1271, 1422, 1625, 1646
BlsI	GCNGC	6 cut(s)	91, 572, 1272, 1423, 1626, 1647
Bme1390I	CCNGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
Bme18I	GGWCC	2 cut(s)	166, 311
BmeT110I	CYCGRG	2 cut(s)	1284, 1349
BmgT120I	GGNCC	2 cut(s)	166, 311
BmrFI	CCNGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
BmsI	GCATC	9 cut(s)	383, 557, 607, 1003, 1086, 1131, 1159, 1396, 1555
BoxI	GACNNNNGTC	1 cut(s)	1777
BpiI	GAAGAC	1 cut(s)	1337
BpmI	CTGGAG	3 cut(s)	1065, 1743, 1753
Bpu10I	CCTNAGC	1 cut(s)	908
Bpu14I	TTCGAA	2 cut(s)	120, 664
BpuEI	CTTGAG	1 cut(s)	1616
BsaBI	GATNNNNATC	1 cut(s)	397
BsaI	GGTCTC	2 cut(s)	356, 1218
BsaJI	CCNNGG	3 cut(s)	304, 536, 1060
BsaXI	ACNNNNNCTCC	2 cut(s)	517, 547
Bsc4I	CCNNNNNNNGG	1 cut(s)	1776
Bse1I	ACTGG	5 cut(s)	363, 1074, 1174, 1528, 1726
Bse3DI	GCAATG	3 cut(s)	286, 981, 1503
Bse8I	GATNNNNATC	1 cut(s)	397
BseBI	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
BseDI	CCNNGG	3 cut(s)	304, 536, 1060
BseGI	GGATG	7 cut(s)	622, 781, 862, 1003, 1336, 1620, 1781
BseJI	GATNNNNATC	1 cut(s)	397
BseLI	CCNNNNNNNGG	1 cut(s)	1776
BseMI	GCAATG	3 cut(s)	286, 981, 1503
BseMII	CTCAG	5 cut(s)	534, 830, 1203, 1485, 1653
BseNI	ACTGG	5 cut(s)	363, 1074, 1174, 1528, 1726
BseXI	GCAGC	5 cut(s)	557, 1257, 1408, 1611, 1632
BsgI	GTGCAG	1 cut(s)	1407
BshFI	GGCC	2 cut(s)	656, 718
BsiHKCI	CYCGRG	2 cut(s)	1284, 1349
BslFI	GGGAC	1 cut(s)	143
BslI	CCNNNNNNNGG	1 cut(s)	1776
BsmAI	GTCTC	5 cut(s)	15, 356, 1083, 1218, 1626
BsmFI	GGGAC	1 cut(s)	143
BsmI	GAATGC	1 cut(s)	1606
BsnI	GGCC	2 cut(s)	656, 718
Bso31I	GGTCTC	2 cut(s)	356, 1218
BsoBI	CYCGRG	2 cut(s)	1284, 1349
Bsp119I	TTCGAA	2 cut(s)	120, 664
Bsp143I	GATC	7 cut(s)	55, 264, 398, 670, 978, 1357, 1432
Bsp19I	CCATGG	1 cut(s)	536
BspACI	CCGC	5 cut(s)	87, 90, 396, 1552, 1589
BspANI	GGCC	2 cut(s)	656, 718
BspCNI	CTCAG	5 cut(s)	535, 831, 1204, 1484, 1652
BspHI	TCATGA	1 cut(s)	678
BspMAI	CTGCAG	1 cut(s)	828
BspMI	ACCTGC	1 cut(s)	831
BspPI	GGATC	1 cut(s)	406
BspT104I	TTCGAA	2 cut(s)	120, 664
BspTI	CTTAAG	1 cut(s)	512
BspTNI	GGTCTC	2 cut(s)	356, 1218
BsrBI	CCGCTC	1 cut(s)	1554
BsrDI	GCAATG	3 cut(s)	286, 981, 1503
BsrI	ACTGG	5 cut(s)	363, 1074, 1174, 1528, 1726
BssECI	CCNNGG	3 cut(s)	304, 536, 1060
BssMI	GATC	7 cut(s)	55, 264, 398, 670, 978, 1357, 1432
BssT1I	CCWWGG	2 cut(s)	536, 1060
Bst2UI	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
Bst4CI	ACNGT	4 cut(s)	508, 626, 1021, 1388
BstAFI	CTTAAG	1 cut(s)	512
BstBI	TTCGAA	2 cut(s)	120, 664
BstC8I	GCNNGC	3 cut(s)	1411, 1415, 1419
BstDEI	CTNAG	8 cut(s)	389, 543, 794, 839, 908, 1212, 1471, 1639
BstDSI	CCRYGG	1 cut(s)	536
BstF5I	GGATG	7 cut(s)	622, 781, 862, 1003, 1336, 1620, 1781
BstKTI	GATC	7 cut(s)	58, 267, 401, 673, 981, 1360, 1435
BstMAI	GTCTC	5 cut(s)	15, 356, 1083, 1218, 1626
BstMBI	GATC	7 cut(s)	55, 264, 398, 670, 978, 1357, 1432
BstMWI	GCNNNNNNNGC	5 cut(s)	590, 909, 1156, 1217, 1764
BstNI	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
BstNSI	RCATGY	3 cut(s)	1293, 1413, 1421
BstPAI	GACNNNNGTC	1 cut(s)	1777
BstSCI	CCNGG	7 cut(s)	31, 137, 304, 766, 876, 1206, 1458
BstSFI	CTRYAG	2 cut(s)	824, 1017
BstV1I	GCAGC	5 cut(s)	557, 1257, 1408, 1611, 1632
BstV2I	GAAGAC	1 cut(s)	1337
BsuI	GTATCC	2 cut(s)	222, 845
BsuRI	GGCC	2 cut(s)	656, 718
BtgI	CCRYGG	1 cut(s)	536
BtsCI	GGATG	7 cut(s)	622, 781, 862, 1003, 1336, 1620, 1781
BtsI	GCAGTG	1 cut(s)	58
BtsIMutI	CAGTG	3 cut(s)	58, 356, 504
BveI	ACCTGC	1 cut(s)	831
Cac8I	GCNNGC	3 cut(s)	1411, 1415, 1419
CaiI	CAGNNNCTG	1 cut(s)	1465
CciI	TCATGA	1 cut(s)	678
Cfr13I	GGNCC	2 cut(s)	166, 311
Csp6I	GTAC	2 cut(s)	509, 914
CviQI	GTAC	2 cut(s)	509, 914
DdeI	CTNAG	8 cut(s)	389, 543, 794, 839, 908, 1212, 1471, 1639
DpnI	GATC	7 cut(s)	57, 266, 400, 672, 980, 1359, 1434
DpnII	GATC	7 cut(s)	55, 264, 398, 670, 978, 1357, 1432
DraI	TTTAAA	1 cut(s)	366
EaeI	YGGCCR	1 cut(s)	654
Eco130I	CCWWGG	2 cut(s)	536, 1060
Eco31I	GGTCTC	2 cut(s)	356, 1218
Eco47I	GGWCC	2 cut(s)	166, 311
Eco57I	CTGAAG	3 cut(s)	441, 1349, 1728
Eco88I	CYCGRG	2 cut(s)	1284, 1349
EcoRII	CCWGG	7 cut(s)	31, 137, 304, 766, 876, 1206, 1458
EcoT14I	CCWWGG	2 cut(s)	536, 1060
EcoT22I	ATGCAT	2 cut(s)	1146, 1411
ErhI	CCWWGG	2 cut(s)	536, 1060
FalI	AAGNNNNNCTT	2 cut(s)	1578, 1610
FaqI	GGGAC	1 cut(s)	143
FauI	CCCGC	1 cut(s)	94
FbaI	TGATCA	1 cut(s)	55
Fnu4HI	GCNGC	6 cut(s)	90, 571, 1271, 1422, 1625, 1646
FokI	GGATG	7 cut(s)	629, 788, 869, 1010, 1323, 1627, 1768
Fsp4HI	GCNGC	6 cut(s)	90, 571, 1271, 1422, 1625, 1646
FspBI	CTAG	2 cut(s)	107, 597
GluI	GCNGC	6 cut(s)	90, 571, 1271, 1422, 1625, 1646
GsuI	CTGGAG	3 cut(s)	1065, 1743, 1753
HaeIII	GGCC	2 cut(s)	656, 718
HindIII	AAGCTT	2 cut(s)	290, 636
HphI	GGTGA	2 cut(s)	184, 1084
Hpy166II	GTNNAC	2 cut(s)	205, 311
Hpy188I	TCNGA	9 cut(s)	403, 444, 468, 563, 1329, 1474, 1537, 1642, 1708
Hpy8I	GTNNAC	2 cut(s)	205, 311
Hpy99I	CGWCG	1 cut(s)	626
HpyAV	CCTTC	9 cut(s)	205, 270, 583, 782, 1350, 1359, 1501, 1538, 1770
HpyCH4III	ACNGT	4 cut(s)	508, 626, 1021, 1388
HpyF10VI	GCNNNNNNNGC	5 cut(s)	590, 909, 1156, 1217, 1764
HpyF3I	CTNAG	8 cut(s)	389, 543, 794, 839, 908, 1212, 1471, 1639
Ksp22I	TGATCA	1 cut(s)	55
Kzo9I	GATC	7 cut(s)	55, 264, 398, 670, 978, 1357, 1432
LmnI	GCTCC	3 cut(s)	388, 880, 1772
Lsp1109I	GCAGC	5 cut(s)	557, 1257, 1408, 1611, 1632
LweI	GCATC	9 cut(s)	383, 557, 607, 1003, 1086, 1131, 1159, 1396, 1555
MaeI	CTAG	2 cut(s)	107, 597
MaeIII	GTNAC	1 cut(s)	842
MalI	GATC	7 cut(s)	57, 266, 400, 672, 980, 1359, 1434
MbiI	CCGCTC	1 cut(s)	1554
MboI	GATC	7 cut(s)	55, 264, 398, 670, 978, 1357, 1432
MfeI	CAATTG	3 cut(s)	245, 579, 1749
MlsI	TGGCCA	1 cut(s)	656
MluNI	TGGCCA	1 cut(s)	656
MlyI	GAGTC	2 cut(s)	569, 1327
MnlI	CCTC	6 cut(s)	675, 791, 847, 914, 930, 1482
Mox20I	TGGCCA	1 cut(s)	656
Mph1103I	ATGCAT	2 cut(s)	1146, 1411
MroXI	GAANNNNTTC	4 cut(s)	330, 426, 462, 936
MscI	TGGCCA	1 cut(s)	656
MseI	TTAA	6 cut(s)	365, 513, 965, 1575, 1584, 1686
MslI	CAYNNNNRTG	2 cut(s)	391, 776
Msp20I	TGGCCA	1 cut(s)	656
MspCI	CTTAAG	1 cut(s)	512
MspR9I	CCNGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
MunI	CAATTG	3 cut(s)	245, 579, 1749
Mva1269I	GAATGC	1 cut(s)	1606
MvaI	CCWGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
MwoI	GCNNNNNNNGC	5 cut(s)	590, 909, 1156, 1217, 1764
NcoI	CCATGG	1 cut(s)	536
NdeII	GATC	7 cut(s)	55, 264, 398, 670, 978, 1357, 1432
NsiI	ATGCAT	2 cut(s)	1146, 1411
NspI	RCATGY	3 cut(s)	1293, 1413, 1421
NspV	TTCGAA	2 cut(s)	120, 664
PaeI	GCATGC	2 cut(s)	1413, 1421
PaeR7I	CTCGAG	1 cut(s)	1284
PagI	TCATGA	1 cut(s)	678
PctI	GAATGC	1 cut(s)	1606
PdmI	GAANNNNTTC	4 cut(s)	330, 426, 462, 936
PfeI	GAWTC	8 cut(s)	82, 331, 458, 547, 1036, 1511, 1579, 1761
PkrI	GCNGC	6 cut(s)	91, 572, 1272, 1423, 1626, 1647
PleI	GAGTC	2 cut(s)	569, 1327
PpsI	GAGTC	2 cut(s)	569, 1327
PshAI	GACNNNNGTC	1 cut(s)	1777
PsiI	TTATAA	1 cut(s)	1047
Psp6I	CCWGG	7 cut(s)	31, 137, 304, 766, 876, 1206, 1458
PspGI	CCWGG	7 cut(s)	31, 137, 304, 766, 876, 1206, 1458
PspPI	GGNCC	2 cut(s)	166, 311
PspXI	VCTCGAGB	1 cut(s)	1284
PstI	CTGCAG	1 cut(s)	828
PstNI	CAGNNNCTG	1 cut(s)	1465
RsaI	GTAC	2 cut(s)	510, 915
RsaNI	GTAC	2 cut(s)	509, 914
RseI	CAYNNNNRTG	2 cut(s)	391, 776
SaqAI	TTAA	6 cut(s)	365, 513, 965, 1575, 1584, 1686
SatI	GCNGC	6 cut(s)	90, 571, 1271, 1422, 1625, 1646
Sau3AI	GATC	7 cut(s)	55, 264, 398, 670, 978, 1357, 1432
Sau96I	GGNCC	2 cut(s)	166, 311
SchI	GAGTC	2 cut(s)	569, 1327
ScrFI	CCNGG	7 cut(s)	33, 139, 306, 768, 878, 1208, 1460
SfaNI	GCATC	9 cut(s)	383, 557, 607, 1003, 1086, 1131, 1159, 1396, 1555
SfcI	CTRYAG	2 cut(s)	824, 1017
Sfr274I	CTCGAG	1 cut(s)	1284
SfuI	TTCGAA	2 cut(s)	120, 664
SinI	GGWCC	2 cut(s)	166, 311
SlaI	CTCGAG	1 cut(s)	1284
SmiMI	CAYNNNNRTG	2 cut(s)	391, 776
SmlI	CTYRAG	3 cut(s)	512, 1284, 1595
SmoI	CTYRAG	3 cut(s)	512, 1284, 1595
SphI	GCATGC	2 cut(s)	1413, 1421
SsiI	CCGC	5 cut(s)	87, 90, 396, 1552, 1589
SspI	AATATT	2 cut(s)	1051, 1133
SspMI	CTAG	2 cut(s)	107, 597
StyD4I	CCNGG	7 cut(s)	31, 137, 304, 766, 876, 1206, 1458
StyI	CCWWGG	2 cut(s)	536, 1060
TaaI	ACNGT	4 cut(s)	508, 626, 1021, 1388
TaqI	TCGA	9 cut(s)	120, 178, 263, 664, 692, 1238, 1285, 1360, 1435
TatI	WGTACW	1 cut(s)	508
TauI	GCSGC	1 cut(s)	92
TfiI	GAWTC	8 cut(s)	82, 331, 458, 547, 1036, 1511, 1579, 1761
Tru1I	TTAA	6 cut(s)	365, 513, 965, 1575, 1584, 1686
Tru9I	TTAA	6 cut(s)	365, 513, 965, 1575, 1584, 1686
TscAI	CASTG	3 cut(s)	58, 363, 511
TseI	GCWGC	5 cut(s)	570, 1270, 1421, 1624, 1645
TspDTI	ATGAA	8 cut(s)	17, 133, 667, 945, 1397, 1460, 1674, 1682
TspGWI	ACGGA	1 cut(s)	179
TspRI	CASTG	3 cut(s)	58, 363, 511
Vha464I	CTTAAG	1 cut(s)	512
VpaK11BI	GGWCC	2 cut(s)	166, 311
XapI	RAATTY	5 cut(s)	251, 271, 338, 404, 947
XceI	RCATGY	3 cut(s)	1293, 1413, 1421
XhoI	CTCGAG	1 cut(s)	1284
XmnI	GAANNNNTTC	4 cut(s)	330, 426, 462, 936
XspI	CTAG	2 cut(s)	107, 597
Zsp2I	ATGCAT	2 cut(s)	1146, 1411

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.