TPR and ankyrin repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g05800 FvH4_4g14930 FvH4_7g17270 |
| rosa_chinensis | RchiOBHm_Chr1g0313751 RchiOBHm_Chr2g0115071 RchiOBHm_Chr3g0490401 RchiOBHm_Chr4g0432591 |
| rosa_laevigata | RLG00000030779 |
| rosa_multiflora | Rmu_sc0000600.1_g000052 |
| rosa_roxburghii | Rroxscaffold_3G00250050 |
| rosa_samantha | Rh4CG152700 Rh7BG355200 |
| rosa_wichuraiana | Rw4G011880 Rw4G011900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 177 |
| AfaI | GTAC | 1 cut(s) | 196 |
| AgsI | TTSAA | 3 cut(s) | 49, 91, 100 |
| AoxI | GGCC | 1 cut(s) | 114 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 95 |
| BfaI | CTAG | 2 cut(s) | 57, 144 |
| BglII | AGATCT | 1 cut(s) | 146 |
| BmsI | GCATC | 1 cut(s) | 50 |
| BseMII | CTCAG | 1 cut(s) | 151 |
| BshFI | GGCC | 1 cut(s) | 116 |
| BsnI | GGCC | 1 cut(s) | 116 |
| Bsp1407I | TGTACA | 1 cut(s) | 194 |
| Bsp143I | GATC | 1 cut(s) | 146 |
| BspANI | GGCC | 1 cut(s) | 116 |
| BspCNI | CTCAG | 1 cut(s) | 150 |
| BspHI | TCATGA | 1 cut(s) | 16 |
| BsrGI | TGTACA | 1 cut(s) | 194 |
| BssMI | GATC | 1 cut(s) | 146 |
| Bst4CI | ACNGT | 1 cut(s) | 192 |
| BstAUI | TGTACA | 1 cut(s) | 194 |
| BstDEI | CTNAG | 1 cut(s) | 137 |
| BstKTI | GATC | 1 cut(s) | 149 |
| BstMBI | GATC | 1 cut(s) | 146 |
| BstX2I | RGATCY | 1 cut(s) | 146 |
| BstYI | RGATCY | 1 cut(s) | 146 |
| BsuRI | GGCC | 1 cut(s) | 116 |
| CciI | TCATGA | 1 cut(s) | 16 |
| Csp6I | GTAC | 1 cut(s) | 195 |
| CviAII | CATG | 2 cut(s) | 17, 166 |
| CviJI | RGCY | 2 cut(s) | 116, 172 |
| CviKI_1 | RGCY | 2 cut(s) | 116, 172 |
| CviQI | GTAC | 1 cut(s) | 195 |
| DdeI | CTNAG | 1 cut(s) | 137 |
| DpnI | GATC | 1 cut(s) | 148 |
| DpnII | GATC | 1 cut(s) | 146 |
| Eco57I | CTGAAG | 1 cut(s) | 177 |
| FaeI | CATG | 2 cut(s) | 20, 169 |
| FaiI | YATR | 4 cut(s) | 18, 41, 167, 199 |
| FatI | CATG | 2 cut(s) | 16, 165 |
| FspBI | CTAG | 2 cut(s) | 57, 144 |
| HaeIII | GGCC | 1 cut(s) | 116 |
| Hin1II | CATG | 2 cut(s) | 20, 169 |
| HinfI | GANTC | 1 cut(s) | 103 |
| Hpy166II | GTNNAC | 1 cut(s) | 195 |
| Hpy188I | TCNGA | 1 cut(s) | 108 |
| Hpy188III | TCNNGA | 2 cut(s) | 17, 100 |
| Hpy8I | GTNNAC | 1 cut(s) | 195 |
| HpyCH4III | ACNGT | 1 cut(s) | 192 |
| HpyCH4V | TGCA | 1 cut(s) | 63 |
| HpyF3I | CTNAG | 1 cut(s) | 137 |
| Hsp92II | CATG | 2 cut(s) | 20, 169 |
| Kzo9I | GATC | 1 cut(s) | 146 |
| LpnPI | CCDG | 1 cut(s) | 130 |
| LweI | GCATC | 1 cut(s) | 50 |
| MaeI | CTAG | 2 cut(s) | 57, 144 |
| MalI | GATC | 1 cut(s) | 148 |
| MboI | GATC | 1 cut(s) | 146 |
| MboII | GAAGA | 1 cut(s) | 141 |
| MflI | RGATCY | 1 cut(s) | 146 |
| MluCI | AATT | 2 cut(s) | 11, 42 |
| MroXI | GAANNNNTTC | 1 cut(s) | 95 |
| MseI | TTAA | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 146 |
| NlaIII | CATG | 2 cut(s) | 20, 169 |
| PagI | TCATGA | 1 cut(s) | 16 |
| PdmI | GAANNNNTTC | 1 cut(s) | 95 |
| PfeI | GAWTC | 1 cut(s) | 103 |
| PsuI | RGATCY | 1 cut(s) | 146 |
| RsaI | GTAC | 1 cut(s) | 196 |
| RsaNI | GTAC | 1 cut(s) | 195 |
| SaqAI | TTAA | 1 cut(s) | 81 |
| Sau3AI | GATC | 1 cut(s) | 146 |
| SetI | ASST | 1 cut(s) | 69 |
| SfaNI | GCATC | 1 cut(s) | 50 |
| SgeI | CNNG | 8 cut(s) | 29, 69, 76, 112, 129, 156, 178, 194 |
| Sse9I | AATT | 2 cut(s) | 11, 42 |
| SspMI | CTAG | 2 cut(s) | 57, 144 |
| TaaI | ACNGT | 1 cut(s) | 192 |
| TasI | AATT | 2 cut(s) | 11, 42 |
| TatI | WGTACW | 1 cut(s) | 194 |
| TfiI | GAWTC | 1 cut(s) | 103 |
| Tru1I | TTAA | 1 cut(s) | 81 |
| Tru9I | TTAA | 1 cut(s) | 81 |
| TspDTI | ATGAA | 1 cut(s) | 5 |
| XmnI | GAANNNNTTC | 1 cut(s) | 95 |
| XspI | CTAG | 2 cut(s) | 57, 144 |