TPR and ankyrin repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g05800 FvH4_4g14930 FvH4_7g17270 |
| rosa_chinensis | RchiOBHm_Chr1g0313751 RchiOBHm_Chr2g0115071 RchiOBHm_Chr3g0490401 RchiOBHm_Chr4g0432591 |
| rosa_laevigata | RLG00000030779 |
| rosa_multiflora | Rmu_sc0000600.1_g000052 |
| rosa_roxburghii | Rroxscaffold_3G00250050 |
| rosa_samantha | Rh4CG152700 Rh7BG355200 |
| rosa_wichuraiana | Rw4G011880 Rw4G011900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 33 |
| AclWI | GGATC | 1 cut(s) | 154 |
| AcsI | RAATTY | 1 cut(s) | 233 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 168 |
| AgsI | TTSAA | 4 cut(s) | 49, 91, 100, 229 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 95, 127 |
| Alw26I | GTCTC | 1 cut(s) | 170 |
| AlwI | GGATC | 1 cut(s) | 154 |
| AoxI | GGCC | 1 cut(s) | 114 |
| ApoI | RAATTY | 1 cut(s) | 233 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 95 |
| BcoDI | GTCTC | 1 cut(s) | 170 |
| BfaI | CTAG | 1 cut(s) | 57 |
| BmsI | GCATC | 1 cut(s) | 50 |
| BpmI | CTGGAG | 1 cut(s) | 194 |
| BsaI | GGTCTC | 1 cut(s) | 170 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 168 |
| Bse1I | ACTGG | 1 cut(s) | 148 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BseNI | ACTGG | 1 cut(s) | 148 |
| BseRI | GAGGAG | 1 cut(s) | 205 |
| BshFI | GGCC | 1 cut(s) | 116 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 168 |
| BsmAI | GTCTC | 1 cut(s) | 170 |
| BsnI | GGCC | 1 cut(s) | 116 |
| Bso31I | GGTCTC | 1 cut(s) | 170 |
| Bsp143I | GATC | 1 cut(s) | 146 |
| BspANI | GGCC | 1 cut(s) | 116 |
| BspPI | GGATC | 1 cut(s) | 154 |
| BspTNI | GGTCTC | 1 cut(s) | 170 |
| BsrI | ACTGG | 1 cut(s) | 148 |
| BssMI | GATC | 1 cut(s) | 146 |
| BstKTI | GATC | 1 cut(s) | 149 |
| BstMAI | GTCTC | 1 cut(s) | 170 |
| BstMBI | GATC | 1 cut(s) | 146 |
| BsuRI | GGCC | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 141 |
| CviAII | CATG | 1 cut(s) | 166 |
| CviJI | RGCY | 4 cut(s) | 116, 161, 172, 267 |
| CviKI_1 | RGCY | 4 cut(s) | 116, 161, 172, 267 |
| DpnI | GATC | 1 cut(s) | 148 |
| DpnII | GATC | 1 cut(s) | 146 |
| Eco31I | GGTCTC | 1 cut(s) | 170 |
| FaeI | CATG | 1 cut(s) | 169 |
| FaiI | YATR | 3 cut(s) | 41, 167, 283 |
| FatI | CATG | 1 cut(s) | 165 |
| FblI | GTMKAC | 1 cut(s) | 33 |
| FspBI | CTAG | 1 cut(s) | 57 |
| GsuI | CTGGAG | 1 cut(s) | 194 |
| HaeIII | GGCC | 1 cut(s) | 116 |
| Hin1II | CATG | 1 cut(s) | 169 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| Hpy166II | GTNNAC | 1 cut(s) | 34 |
| Hpy188III | TCNNGA | 2 cut(s) | 100, 226 |
| Hpy8I | GTNNAC | 1 cut(s) | 34 |
| HpyAV | CCTTC | 1 cut(s) | 172 |
| HpyCH4V | TGCA | 3 cut(s) | 63, 259, 274 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| Kzo9I | GATC | 1 cut(s) | 146 |
| LmnI | GCTCC | 1 cut(s) | 7 |
| LpnPI | CCDG | 3 cut(s) | 129, 130, 158 |
| LweI | GCATC | 1 cut(s) | 50 |
| MaeI | CTAG | 1 cut(s) | 57 |
| MaeIII | GTNAC | 1 cut(s) | 209 |
| MalI | GATC | 1 cut(s) | 148 |
| MboI | GATC | 1 cut(s) | 146 |
| MboII | GAAGA | 1 cut(s) | 241 |
| MluCI | AATT | 3 cut(s) | 11, 42, 233 |
| MnlI | CCTC | 1 cut(s) | 226 |
| MroXI | GAANNNNTTC | 1 cut(s) | 95 |
| MseI | TTAA | 4 cut(s) | 81, 156, 237, 243 |
| NdeII | GATC | 1 cut(s) | 146 |
| NlaIII | CATG | 1 cut(s) | 169 |
| PdmI | GAANNNNTTC | 1 cut(s) | 95 |
| SalI | GTCGAC | 1 cut(s) | 32 |
| SaqAI | TTAA | 4 cut(s) | 81, 156, 237, 243 |
| Sau3AI | GATC | 1 cut(s) | 146 |
| SetI | ASST | 2 cut(s) | 69, 243 |
| SfaNI | GCATC | 1 cut(s) | 50 |
| Sse9I | AATT | 3 cut(s) | 11, 42, 233 |
| SspMI | CTAG | 1 cut(s) | 57 |
| TaqI | TCGA | 1 cut(s) | 33 |
| TasI | AATT | 3 cut(s) | 11, 42, 233 |
| Tru1I | TTAA | 4 cut(s) | 81, 156, 237, 243 |
| Tru9I | TTAA | 4 cut(s) | 81, 156, 237, 243 |
| TscAI | CASTG | 1 cut(s) | 148 |
| TspDTI | ATGAA | 1 cut(s) | 154 |
| TspRI | CASTG | 1 cut(s) | 148 |
| XapI | RAATTY | 1 cut(s) | 233 |
| XmiI | GTMKAC | 1 cut(s) | 33 |
| XmnI | GAANNNNTTC | 1 cut(s) | 95 |
| XspI | CTAG | 1 cut(s) | 57 |