E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0122481 RchiOBHm_Chr2g0165651 RchiOBHm_Chr4g0388161 RchiOBHm_Chr4g0393341 RchiOBHm_Chr4g0421991 RchiOBHm_Chr5g0042521 RchiOBHm_Chr6g0248831 RchiOBHm_Chr6g0261471 |
| rosa_multiflora | Rmu_ssc0000175.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00094640 Rroxscaffold_4G00322740 Rroxscaffold_5G00347970 Rroxscaffold_7G00174730 Rroxscaffold_7G00210360 |
| rosa_rugosa | Rorug05G0030700 Rorug05G0531300.1 |
| rosa_samantha | Rh2BG595000 Rh7BG190400 Rh7BG475700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 24 |
| AfaI | GTAC | 1 cut(s) | 90 |
| AgsI | TTSAA | 1 cut(s) | 41 |
| AjnI | CCWGG | 1 cut(s) | 136 |
| AluBI | AGCT | 1 cut(s) | 78 |
| AluI | AGCT | 1 cut(s) | 78 |
| Alw26I | GTCTC | 1 cut(s) | 195 |
| ApeKI | GCWGC | 2 cut(s) | 112, 133 |
| BbsI | GAAGAC | 1 cut(s) | 58 |
| BbvI | GCAGC | 2 cut(s) | 99, 120 |
| BciT130I | CCWGG | 1 cut(s) | 138 |
| BcoDI | GTCTC | 1 cut(s) | 195 |
| BfaI | CTAG | 1 cut(s) | 156 |
| BfmI | CTRYAG | 1 cut(s) | 31 |
| BfuAI | ACCTGC | 1 cut(s) | 24 |
| BisI | GCNGC | 2 cut(s) | 113, 134 |
| BlsI | GCNGC | 2 cut(s) | 114, 135 |
| Bme1390I | CCNGG | 1 cut(s) | 138 |
| BmrFI | CCNGG | 1 cut(s) | 138 |
| BpiI | GAAGAC | 1 cut(s) | 58 |
| BpuEI | CTTGAG | 1 cut(s) | 191 |
| Bse1I | ACTGG | 2 cut(s) | 28, 204 |
| BseBI | CCWGG | 1 cut(s) | 138 |
| BseMII | CTCAG | 1 cut(s) | 107 |
| BseNI | ACTGG | 2 cut(s) | 28, 204 |
| BseXI | GCAGC | 2 cut(s) | 99, 120 |
| BseYI | CCCAGC | 1 cut(s) | 64 |
| BsmAI | GTCTC | 1 cut(s) | 195 |
| BspCNI | CTCAG | 1 cut(s) | 108 |
| BspMAI | CTGCAG | 1 cut(s) | 35 |
| BspMI | ACCTGC | 1 cut(s) | 24 |
| BsrI | ACTGG | 2 cut(s) | 28, 204 |
| Bst2UI | CCWGG | 1 cut(s) | 138 |
| BstC8I | GCNNGC | 1 cut(s) | 153 |
| BstDEI | CTNAG | 1 cut(s) | 116 |
| BstMAI | GTCTC | 1 cut(s) | 195 |
| BstNI | CCWGG | 1 cut(s) | 138 |
| BstNSI | RCATGY | 1 cut(s) | 112 |
| BstSCI | CCNGG | 1 cut(s) | 136 |
| BstSFI | CTRYAG | 1 cut(s) | 31 |
| BstV1I | GCAGC | 2 cut(s) | 99, 120 |
| BstV2I | GAAGAC | 1 cut(s) | 58 |
| BveI | ACCTGC | 1 cut(s) | 24 |
| Cac8I | GCNNGC | 1 cut(s) | 153 |
| Csp6I | GTAC | 1 cut(s) | 89 |
| CviAII | CATG | 1 cut(s) | 109 |
| CviJI | RGCY | 3 cut(s) | 78, 133, 166 |
| CviKI_1 | RGCY | 3 cut(s) | 78, 133, 166 |
| CviQI | GTAC | 1 cut(s) | 89 |
| DdeI | CTNAG | 1 cut(s) | 116 |
| EcoRII | CCWGG | 1 cut(s) | 136 |
| FaeI | CATG | 1 cut(s) | 112 |
| FaiI | YATR | 4 cut(s) | 110, 210, 212, 218 |
| FatI | CATG | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 2 cut(s) | 113, 134 |
| Fsp4HI | GCNGC | 2 cut(s) | 113, 134 |
| FspBI | CTAG | 1 cut(s) | 156 |
| GluI | GCNGC | 2 cut(s) | 113, 134 |
| GsaI | CCCAGC | 1 cut(s) | 68 |
| Hin1II | CATG | 1 cut(s) | 112 |
| HinfI | GANTC | 3 cut(s) | 5, 27, 82 |
| HpyCH4V | TGCA | 1 cut(s) | 33 |
| HpyF3I | CTNAG | 1 cut(s) | 116 |
| Hsp92II | CATG | 1 cut(s) | 112 |
| LmnI | GCTCC | 2 cut(s) | 68, 75 |
| LpnPI | CCDG | 9 cut(s) | 9, 19, 50, 64, 85, 123, 150, 165, 217 |
| Lsp1109I | GCAGC | 2 cut(s) | 99, 120 |
| MaeI | CTAG | 1 cut(s) | 156 |
| MboII | GAAGA | 1 cut(s) | 63 |
| MmeI | TCCRAC | 1 cut(s) | 84 |
| MnlI | CCTC | 5 cut(s) | 12, 123, 156, 168, 176 |
| MspR9I | CCNGG | 1 cut(s) | 138 |
| MvaI | CCWGG | 1 cut(s) | 138 |
| NlaIII | CATG | 1 cut(s) | 112 |
| NspI | RCATGY | 1 cut(s) | 112 |
| PfeI | GAWTC | 3 cut(s) | 5, 27, 82 |
| PkrI | GCNGC | 2 cut(s) | 114, 135 |
| Psp6I | CCWGG | 1 cut(s) | 136 |
| PspFI | CCCAGC | 1 cut(s) | 64 |
| PspGI | CCWGG | 1 cut(s) | 136 |
| PstI | CTGCAG | 1 cut(s) | 35 |
| RsaI | GTAC | 1 cut(s) | 90 |
| RsaNI | GTAC | 1 cut(s) | 89 |
| SatI | GCNGC | 2 cut(s) | 113, 134 |
| ScrFI | CCNGG | 1 cut(s) | 138 |
| SetI | ASST | 3 cut(s) | 38, 80, 179 |
| SfcI | CTRYAG | 1 cut(s) | 31 |
| SmlI | CTYRAG | 1 cut(s) | 170 |
| SmoI | CTYRAG | 1 cut(s) | 170 |
| SspMI | CTAG | 1 cut(s) | 156 |
| StyD4I | CCNGG | 1 cut(s) | 136 |
| TfiI | GAWTC | 3 cut(s) | 5, 27, 82 |
| TseI | GCWGC | 2 cut(s) | 112, 133 |
| TspDTI | ATGAA | 2 cut(s) | 227, 233 |
| TspGWI | ACGGA | 1 cut(s) | 70 |
| XceI | RCATGY | 1 cut(s) | 112 |
| XspI | CTAG | 1 cut(s) | 156 |