Meiotic recombination protein DMC1 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0122481 RchiOBHm_Chr2g0165651 RchiOBHm_Chr4g0388161 RchiOBHm_Chr4g0393341 RchiOBHm_Chr4g0421991 RchiOBHm_Chr5g0042521 RchiOBHm_Chr6g0248831 RchiOBHm_Chr6g0261471 |
| rosa_multiflora | Rmu_ssc0000175.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00094640 Rroxscaffold_4G00322740 Rroxscaffold_5G00347970 Rroxscaffold_7G00174730 Rroxscaffold_7G00210360 |
| rosa_rugosa | Rorug05G0030700 Rorug05G0531300.1 |
| rosa_samantha | Rh2BG595000 Rh7BG190400 Rh7BG475700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AloI | GAACNNNNNNTCC | 2 cut(s) | 142, 174 |
| AluBI | AGCT | 1 cut(s) | 198 |
| AluI | AGCT | 1 cut(s) | 198 |
| BccI | CCATC | 1 cut(s) | 182 |
| BciVI | GTATCC | 1 cut(s) | 168 |
| BfuI | GTATCC | 1 cut(s) | 168 |
| Bse1I | ACTGG | 1 cut(s) | 34 |
| BseGI | GGATG | 1 cut(s) | 174 |
| BseMII | CTCAG | 3 cut(s) | 39, 72, 135 |
| BseNI | ACTGG | 1 cut(s) | 34 |
| BspCNI | CTCAG | 3 cut(s) | 40, 73, 136 |
| BsrI | ACTGG | 1 cut(s) | 34 |
| BstDEI | CTNAG | 3 cut(s) | 48, 81, 144 |
| BstF5I | GGATG | 1 cut(s) | 174 |
| BstNSI | RCATGY | 1 cut(s) | 109 |
| BsuI | GTATCC | 1 cut(s) | 168 |
| BtsCI | GGATG | 1 cut(s) | 174 |
| CviAII | CATG | 3 cut(s) | 106, 110, 192 |
| CviJI | RGCY | 1 cut(s) | 198 |
| CviKI_1 | RGCY | 1 cut(s) | 198 |
| DdeI | CTNAG | 3 cut(s) | 48, 81, 144 |
| EcoT22I | ATGCAT | 1 cut(s) | 111 |
| FaeI | CATG | 3 cut(s) | 109, 113, 195 |
| FaiI | YATR | 3 cut(s) | 107, 111, 193 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 8, 40 |
| FatI | CATG | 3 cut(s) | 105, 109, 191 |
| FokI | GGATG | 1 cut(s) | 161 |
| Hin1II | CATG | 3 cut(s) | 109, 113, 195 |
| Hpy188I | TCNGA | 1 cut(s) | 49 |
| HpyCH4V | TGCA | 2 cut(s) | 10, 109 |
| HpyF3I | CTNAG | 3 cut(s) | 48, 81, 144 |
| Hsp92II | CATG | 3 cut(s) | 109, 113, 195 |
| LpnPI | CCDG | 1 cut(s) | 15 |
| MaeIII | GTNAC | 1 cut(s) | 20 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MluCI | AATT | 1 cut(s) | 33 |
| MnlI | CCTC | 2 cut(s) | 43, 107 |
| Mph1103I | ATGCAT | 1 cut(s) | 111 |
| MseI | TTAA | 2 cut(s) | 36, 102 |
| NlaIII | CATG | 3 cut(s) | 109, 113, 195 |
| NsiI | ATGCAT | 1 cut(s) | 111 |
| NspI | RCATGY | 1 cut(s) | 109 |
| SaqAI | TTAA | 2 cut(s) | 36, 102 |
| SetI | ASST | 3 cut(s) | 43, 54, 200 |
| SgeI | CNNG | 6 cut(s) | 28, 37, 42, 118, 122, 204 |
| Sse9I | AATT | 1 cut(s) | 33 |
| TaqI | TCGA | 1 cut(s) | 60 |
| TasI | AATT | 1 cut(s) | 33 |
| Tru1I | TTAA | 2 cut(s) | 36, 102 |
| Tru9I | TTAA | 2 cut(s) | 36, 102 |
| TspDTI | ATGAA | 1 cut(s) | 180 |
| XceI | RCATGY | 1 cut(s) | 109 |
| Zsp2I | ATGCAT | 1 cut(s) | 111 |