E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0122481 RchiOBHm_Chr2g0165651 RchiOBHm_Chr4g0388161 RchiOBHm_Chr4g0393341 RchiOBHm_Chr4g0421991 RchiOBHm_Chr5g0042521 RchiOBHm_Chr6g0248831 RchiOBHm_Chr6g0261471 |
| rosa_multiflora | Rmu_ssc0000175.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00094640 Rroxscaffold_4G00322740 Rroxscaffold_5G00347970 Rroxscaffold_7G00174730 Rroxscaffold_7G00210360 |
| rosa_rugosa | Rorug05G0030700 Rorug05G0531300.1 |
| rosa_samantha | Rh2BG595000 Rh7BG190400 Rh7BG475700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AjnI | CCWGG | 2 cut(s) | 91, 158 |
| AluBI | AGCT | 1 cut(s) | 46 |
| AluI | AGCT | 1 cut(s) | 46 |
| Alw26I | GTCTC | 2 cut(s) | 150, 172 |
| ApeKI | GCWGC | 1 cut(s) | 67 |
| AspS9I | GGNCC | 1 cut(s) | 60 |
| AvaII | GGWCC | 1 cut(s) | 60 |
| BbvI | GCAGC | 1 cut(s) | 54 |
| BciT130I | CCWGG | 2 cut(s) | 93, 160 |
| BcoDI | GTCTC | 2 cut(s) | 150, 172 |
| BfaI | CTAG | 1 cut(s) | 111 |
| BfmI | CTRYAG | 1 cut(s) | 31 |
| BisI | GCNGC | 1 cut(s) | 68 |
| BlsI | GCNGC | 1 cut(s) | 69 |
| Bme1390I | CCNGG | 2 cut(s) | 93, 160 |
| Bme18I | GGWCC | 1 cut(s) | 60 |
| BmgT120I | GGNCC | 1 cut(s) | 60 |
| BmrFI | CCNGG | 2 cut(s) | 93, 160 |
| BpuEI | CTTGAG | 1 cut(s) | 146 |
| BseBI | CCWGG | 2 cut(s) | 93, 160 |
| BseMII | CTCAG | 1 cut(s) | 62 |
| BseXI | GCAGC | 1 cut(s) | 54 |
| BsmAI | GTCTC | 2 cut(s) | 150, 172 |
| BspCNI | CTCAG | 1 cut(s) | 63 |
| BspMAI | CTGCAG | 1 cut(s) | 35 |
| Bst2UI | CCWGG | 2 cut(s) | 93, 160 |
| BstC8I | GCNNGC | 1 cut(s) | 108 |
| BstDEI | CTNAG | 1 cut(s) | 71 |
| BstMAI | GTCTC | 2 cut(s) | 150, 172 |
| BstNI | CCWGG | 2 cut(s) | 93, 160 |
| BstSCI | CCNGG | 2 cut(s) | 91, 158 |
| BstSFI | CTRYAG | 1 cut(s) | 31 |
| BstV1I | GCAGC | 1 cut(s) | 54 |
| Cac8I | GCNNGC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 1 cut(s) | 60 |
| CsiI | ACCWGGT | 1 cut(s) | 158 |
| CviAII | CATG | 1 cut(s) | 64 |
| CviJI | RGCY | 3 cut(s) | 46, 88, 121 |
| CviKI_1 | RGCY | 3 cut(s) | 46, 88, 121 |
| DdeI | CTNAG | 1 cut(s) | 71 |
| Eco47I | GGWCC | 1 cut(s) | 60 |
| EcoRII | CCWGG | 2 cut(s) | 91, 158 |
| FaeI | CATG | 1 cut(s) | 67 |
| FaiI | YATR | 2 cut(s) | 65, 177 |
| FatI | CATG | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 1 cut(s) | 68 |
| Fsp4HI | GCNGC | 1 cut(s) | 68 |
| FspBI | CTAG | 1 cut(s) | 111 |
| GluI | GCNGC | 1 cut(s) | 68 |
| Hin1II | CATG | 1 cut(s) | 67 |
| HinfI | GANTC | 4 cut(s) | 5, 22, 27, 50 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 1 cut(s) | 33 |
| HpyF3I | CTNAG | 1 cut(s) | 71 |
| Hsp92II | CATG | 1 cut(s) | 67 |
| LmnI | GCTCC | 2 cut(s) | 36, 43 |
| LpnPI | CCDG | 7 cut(s) | 19, 32, 78, 105, 120, 145, 172 |
| Lsp1109I | GCAGC | 1 cut(s) | 54 |
| MabI | ACCWGGT | 1 cut(s) | 158 |
| MaeI | CTAG | 1 cut(s) | 111 |
| MlyI | GAGTC | 1 cut(s) | 16 |
| MmeI | TCCRAC | 1 cut(s) | 38 |
| MnlI | CCTC | 5 cut(s) | 12, 78, 111, 123, 131 |
| MspR9I | CCNGG | 2 cut(s) | 93, 160 |
| MvaI | CCWGG | 2 cut(s) | 93, 160 |
| NlaIII | CATG | 1 cut(s) | 67 |
| PfeI | GAWTC | 3 cut(s) | 5, 27, 50 |
| PkrI | GCNGC | 1 cut(s) | 69 |
| PleI | GAGTC | 1 cut(s) | 16 |
| PpsI | GAGTC | 1 cut(s) | 16 |
| Psp6I | CCWGG | 2 cut(s) | 91, 158 |
| PspGI | CCWGG | 2 cut(s) | 91, 158 |
| PspPI | GGNCC | 1 cut(s) | 60 |
| PstI | CTGCAG | 1 cut(s) | 35 |
| SatI | GCNGC | 1 cut(s) | 68 |
| Sau96I | GGNCC | 1 cut(s) | 60 |
| SchI | GAGTC | 1 cut(s) | 16 |
| ScrFI | CCNGG | 2 cut(s) | 93, 160 |
| SetI | ASST | 3 cut(s) | 48, 134, 164 |
| SexAI | ACCWGGT | 1 cut(s) | 158 |
| SfcI | CTRYAG | 1 cut(s) | 31 |
| SinI | GGWCC | 1 cut(s) | 60 |
| SmlI | CTYRAG | 1 cut(s) | 125 |
| SmoI | CTYRAG | 1 cut(s) | 125 |
| SspMI | CTAG | 1 cut(s) | 111 |
| StyD4I | CCNGG | 2 cut(s) | 91, 158 |
| TaqI | TCGA | 1 cut(s) | 25 |
| TfiI | GAWTC | 3 cut(s) | 5, 27, 50 |
| TseI | GCWGC | 1 cut(s) | 67 |
| VpaK11BI | GGWCC | 1 cut(s) | 60 |
| XspI | CTAG | 1 cut(s) | 111 |