E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0122481 RchiOBHm_Chr2g0165651 RchiOBHm_Chr4g0388161 RchiOBHm_Chr4g0393341 RchiOBHm_Chr4g0421991 RchiOBHm_Chr5g0042521 RchiOBHm_Chr6g0248831 RchiOBHm_Chr6g0261471 |
| rosa_multiflora | Rmu_ssc0000175.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00094640 Rroxscaffold_4G00322740 Rroxscaffold_5G00347970 Rroxscaffold_7G00174730 Rroxscaffold_7G00210360 |
| rosa_rugosa | Rorug05G0030700 Rorug05G0531300.1 |
| rosa_samantha | Rh2BG595000 Rh7BG190400 Rh7BG475700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 12, 15 |
| AcoI | YGGCCR | 1 cut(s) | 83 |
| AcsI | RAATTY | 1 cut(s) | 40 |
| AgsI | TTSAA | 1 cut(s) | 39 |
| AjnI | CCWGG | 1 cut(s) | 202 |
| AluBI | AGCT | 2 cut(s) | 96, 158 |
| AluI | AGCT | 2 cut(s) | 96, 158 |
| Alw26I | GTCTC | 1 cut(s) | 261 |
| AoxI | GGCC | 1 cut(s) | 83 |
| ApeKI | GCWGC | 4 cut(s) | 48, 96, 178, 199 |
| ApoI | RAATTY | 1 cut(s) | 40 |
| BbvI | GCAGC | 4 cut(s) | 35, 83, 165, 186 |
| BccI | CCATC | 1 cut(s) | 107 |
| BciT130I | CCWGG | 1 cut(s) | 204 |
| BcoDI | GTCTC | 1 cut(s) | 261 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BfmI | CTRYAG | 1 cut(s) | 143 |
| BisI | GCNGC | 5 cut(s) | 15, 49, 97, 179, 200 |
| BlsI | GCNGC | 5 cut(s) | 16, 50, 98, 180, 201 |
| Bme1390I | CCNGG | 1 cut(s) | 204 |
| BmrFI | CCNGG | 1 cut(s) | 204 |
| BpuEI | CTTGAG | 1 cut(s) | 257 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 10, 40 |
| Bse118I | RCCGGY | 2 cut(s) | 64, 81 |
| Bse1I | ACTGG | 2 cut(s) | 140, 270 |
| BseBI | CCWGG | 1 cut(s) | 204 |
| BseMII | CTCAG | 1 cut(s) | 173 |
| BseNI | ACTGG | 2 cut(s) | 140, 270 |
| BseXI | GCAGC | 4 cut(s) | 35, 83, 165, 186 |
| BsgI | GTGCAG | 1 cut(s) | 82 |
| BshFI | GGCC | 1 cut(s) | 85 |
| BsiSI | CCGG | 3 cut(s) | 45, 65, 82 |
| BsmAI | GTCTC | 1 cut(s) | 261 |
| BsnI | GGCC | 1 cut(s) | 85 |
| BspACI | CCGC | 2 cut(s) | 12, 15 |
| BspANI | GGCC | 1 cut(s) | 85 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BspMAI | CTGCAG | 1 cut(s) | 147 |
| BsrFI | RCCGGY | 2 cut(s) | 64, 81 |
| BsrI | ACTGG | 2 cut(s) | 140, 270 |
| BssAI | RCCGGY | 2 cut(s) | 64, 81 |
| Bst2UI | CCWGG | 1 cut(s) | 204 |
| Bst4CI | ACNGT | 1 cut(s) | 22 |
| BstC8I | GCNNGC | 1 cut(s) | 219 |
| BstDEI | CTNAG | 1 cut(s) | 182 |
| BstMAI | GTCTC | 1 cut(s) | 261 |
| BstNI | CCWGG | 1 cut(s) | 204 |
| BstNSI | RCATGY | 1 cut(s) | 178 |
| BstSCI | CCNGG | 1 cut(s) | 202 |
| BstSFI | CTRYAG | 1 cut(s) | 143 |
| BstV1I | GCAGC | 4 cut(s) | 35, 83, 165, 186 |
| BsuRI | GGCC | 1 cut(s) | 85 |
| BtsIMutI | CAGTG | 1 cut(s) | 18 |
| Cac8I | GCNNGC | 1 cut(s) | 219 |
| Cfr10I | RCCGGY | 2 cut(s) | 64, 81 |
| CviAII | CATG | 1 cut(s) | 175 |
| CviJI | RGCY | 6 cut(s) | 48, 85, 96, 158, 199, 232 |
| CviKI_1 | RGCY | 6 cut(s) | 48, 85, 96, 158, 199, 232 |
| DdeI | CTNAG | 1 cut(s) | 182 |
| EaeI | YGGCCR | 1 cut(s) | 83 |
| EcoRII | CCWGG | 1 cut(s) | 202 |
| FaeI | CATG | 1 cut(s) | 178 |
| FaiI | YATR | 6 cut(s) | 88, 110, 176, 276, 278, 284 |
| FatI | CATG | 1 cut(s) | 174 |
| FauI | CCCGC | 1 cut(s) | 19 |
| Fnu4HI | GCNGC | 5 cut(s) | 15, 49, 97, 179, 200 |
| Fsp4HI | GCNGC | 5 cut(s) | 15, 49, 97, 179, 200 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GluI | GCNGC | 5 cut(s) | 15, 49, 97, 179, 200 |
| HaeIII | GGCC | 1 cut(s) | 85 |
| HapII | CCGG | 3 cut(s) | 45, 65, 82 |
| Hin1II | CATG | 1 cut(s) | 178 |
| HinfI | GANTC | 3 cut(s) | 117, 139, 162 |
| HpaII | CCGG | 3 cut(s) | 45, 65, 82 |
| HpyAV | CCTTC | 1 cut(s) | 39 |
| HpyCH4III | ACNGT | 1 cut(s) | 22 |
| HpyCH4V | TGCA | 2 cut(s) | 99, 145 |
| HpyF3I | CTNAG | 1 cut(s) | 182 |
| Hsp92II | CATG | 1 cut(s) | 178 |
| LmnI | GCTCC | 2 cut(s) | 148, 155 |
| Lsp1109I | GCAGC | 4 cut(s) | 35, 83, 165, 186 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MluCI | AATT | 1 cut(s) | 40 |
| MmeI | TCCRAC | 1 cut(s) | 150 |
| MnlI | CCTC | 6 cut(s) | 36, 124, 189, 222, 234, 242 |
| MspI | CCGG | 3 cut(s) | 45, 65, 82 |
| MspR9I | CCNGG | 1 cut(s) | 204 |
| MvaI | CCWGG | 1 cut(s) | 204 |
| NlaIII | CATG | 1 cut(s) | 178 |
| NspI | RCATGY | 1 cut(s) | 178 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 98 |
| PfeI | GAWTC | 3 cut(s) | 117, 139, 162 |
| PkrI | GCNGC | 5 cut(s) | 16, 50, 98, 180, 201 |
| Psp6I | CCWGG | 1 cut(s) | 202 |
| PspGI | CCWGG | 1 cut(s) | 202 |
| PstI | CTGCAG | 1 cut(s) | 147 |
| SatI | GCNGC | 5 cut(s) | 15, 49, 97, 179, 200 |
| ScrFI | CCNGG | 1 cut(s) | 204 |
| SetI | ASST | 3 cut(s) | 98, 160, 245 |
| SfcI | CTRYAG | 1 cut(s) | 143 |
| SmlI | CTYRAG | 1 cut(s) | 236 |
| SmoI | CTYRAG | 1 cut(s) | 236 |
| Sse9I | AATT | 1 cut(s) | 40 |
| SsiI | CCGC | 2 cut(s) | 12, 15 |
| SspMI | CTAG | 1 cut(s) | 222 |
| StyD4I | CCNGG | 1 cut(s) | 202 |
| TaaI | ACNGT | 1 cut(s) | 22 |
| TaqI | TCGA | 1 cut(s) | 92 |
| TasI | AATT | 1 cut(s) | 40 |
| TauI | GCSGC | 1 cut(s) | 17 |
| TfiI | GAWTC | 3 cut(s) | 117, 139, 162 |
| TscAI | CASTG | 1 cut(s) | 25 |
| TseI | GCWGC | 4 cut(s) | 48, 96, 178, 199 |
| TspDTI | ATGAA | 2 cut(s) | 293, 299 |
| TspRI | CASTG | 1 cut(s) | 25 |
| XapI | RAATTY | 1 cut(s) | 40 |
| XceI | RCATGY | 1 cut(s) | 178 |
| XspI | CTAG | 1 cut(s) | 222 |